RNA–Protein interactions for RNA: ENST00000370217.3

ARHGAP29-202, Transcript of Rho GTPase activating protein 29, humanhuman

TSL 1 (best) BASIC

Gene ARHGAP29, Length 2,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP29-202ENST00000370217 NISCHQ9Y2I1 1504 aa53.66■■■■■ 6.18
ARHGAP29-202ENST00000370217 CCDC180Q9P1Z9 1646 aa46.65■■■■■ 5.06
ARHGAP29-202ENST00000370217 ZCCHC6Q5VYS8 1495 aaKnown RBP45.08■■■■■ 4.81
ARHGAP29-202ENST00000370217 DCAF8L2P0C7V8 631 aa44.41■■■■■ 4.7
ARHGAP29-202ENST00000370217 ABCC9O60706 1549 aa44.36■■■■■ 4.69
ARHGAP29-202ENST00000370217 DCAF1Q9Y4B6 1507 aa44.22■■■■■ 4.67
ARHGAP29-202ENST00000370217 SHROOM4Q9ULL8 1493 aa43.98■■■■■ 4.63
ARHGAP29-202ENST00000370217 MYO15BQ96JP2 1530 aa43.66■■■■■ 4.58
ARHGAP29-202ENST00000370217 NACADO15069 1562 aa43.45■■■■■ 4.55
ARHGAP29-202ENST00000370217 SCRIBQ14160 1630 aa43.12■■■■■ 4.49
ARHGAP29-202ENST00000370217 RB1CC1Q8TDY2 1594 aa43.1■■■■■ 4.49
ARHGAP29-202ENST00000370217 UNC13AQ9UPW8 1703 aa42.43■■■■■ 4.38
ARHGAP29-202ENST00000370217 SUPT5HO00267 1087 aaKnown RBP42.24■■■■■ 4.35
ARHGAP29-202ENST00000370217 BICRAQ9NZM4 1560 aa42■■■■■ 4.31
ARHGAP29-202ENST00000370217 PABPN1Q86U42 306 aaKnown RBP eCLIP41.9■■■■■ 4.3
ARHGAP29-202ENST00000370217 CECR2Q9BXF3 1484 aa41.85■■■■■ 4.29
ARHGAP29-202ENST00000370217 RSF1Q96T23 1441 aaPredicted RBP41.68■■■■■ 4.26
ARHGAP29-202ENST00000370217 MROH2BQ7Z745 1585 aa41.56■■■■■ 4.24
ARHGAP29-202ENST00000370217 BAZ1AQ9NRL2 1556 aaPredicted RBP41.35■■■■■ 4.21
ARHGAP29-202ENST00000370217 SMARCA4P51532 1647 aa41.25■■■■■ 4.19
ARHGAP29-202ENST00000370217 WIZO95785 1651 aa41.23■■■■■ 4.19
ARHGAP29-202ENST00000370217 PEG3Q9GZU2 1588 aa40.68■■■■■ 4.1
ARHGAP29-202ENST00000370217 TOP2AP11388 1531 aaKnown RBP40.66■■■■■ 4.1
ARHGAP29-202ENST00000370217 EIF4G1Q04637 1599 aaKnown RBP40.66■■■■■ 4.1
ARHGAP29-202ENST00000370217 ATAD2BQ9ULI0 1458 aa40.59■■■■■ 4.09
ARHGAP29-202ENST00000370217 SMARCA2P51531 1590 aa40.43■■■■■ 4.06
ARHGAP29-202ENST00000370217 CHIC1Q5VXU3 224 aa40.4■■■■■ 4.06
ARHGAP29-202ENST00000370217 CCDC88BA6NC98 1476 aa40.33■■■■■ 4.05
ARHGAP29-202ENST00000370217 BAZ1BQ9UIG0 1483 aaKnown RBP40.31■■■■■ 4.04
ARHGAP29-202ENST00000370217 NCAPD3P42695 1498 aa40.17■■■■■ 4.02
ARHGAP29-202ENST00000370217 CC2D2AQ9P2K1 1620 aa40.08■■■■■ 4.01
ARHGAP29-202ENST00000370217 HMGXB3Q12766 1538 aa40.08■■■■■ 4.01
ARHGAP29-202ENST00000370217 TRIM41Q8WV44 630 aa39.58■■■■□ 3.93
ARHGAP29-202ENST00000370217 ABCC8Q09428 1581 aa39.57■■■■□ 3.93
ARHGAP29-202ENST00000370217 DNAJC5BQ9UF47 199 aa39.39■■■■□ 3.9
ARHGAP29-202ENST00000370217 CFTRP13569 1480 aa39.31■■■■□ 3.88
ARHGAP29-202ENST00000370217 WRNQ14191 1432 aaPredicted RBP eCLIP39.16■■■■□ 3.86
ARHGAP29-202ENST00000370217 CADPSQ9ULU8 1353 aa39.16■■■■□ 3.86
ARHGAP29-202ENST00000370217 SYNJ1O43426 1573 aa39.11■■■■□ 3.85
ARHGAP29-202ENST00000370217 PRDM2Q13029 1718 aa39.04■■■■□ 3.84
ARHGAP29-202ENST00000370217 FAM9AQ8IZU1 332 aaPredicted RBP39.03■■■■□ 3.84
ARHGAP29-202ENST00000370217 NESP48681 1621 aa39.01■■■■□ 3.84
ARHGAP29-202ENST00000370217 LOC105371045A0A1W2PR82 267 aa38.98■■■■□ 3.83
ARHGAP29-202ENST00000370217 TOP2BQ02880 1626 aa38.84■■■■□ 3.81
ARHGAP29-202ENST00000370217 CUX1P39880 1505 aa38.83■■■■□ 3.81
ARHGAP29-202ENST00000370217 SOGA1O94964 1423 aa38.83■■■■□ 3.81
ARHGAP29-202ENST00000370217 BIVM-ERCC5R4GMW8 1640 aa38.8■■■■□ 3.8
ARHGAP29-202ENST00000370217 FANCD2Q9BXW9 1451 aa38.76■■■■□ 3.8
ARHGAP29-202ENST00000370217 LAMC3Q9Y6N6 1575 aa38.76■■■■□ 3.79
ARHGAP29-202ENST00000370217 RUSC2Q8N2Y8 1516 aa38.74■■■■□ 3.79
ARHGAP29-202ENST00000370217 EHMT2Q96KQ7 1210 aa38.6■■■■□ 3.77
ARHGAP29-202ENST00000370217 CEP164Q9UPV0 1460 aa38.46■■■■□ 3.75
ARHGAP29-202ENST00000370217 KIF21AQ7Z4S6 1674 aa38.45■■■■□ 3.75
ARHGAP29-202ENST00000370217 PDS5BQ9NTI5 1447 aa38.44■■■■□ 3.74
ARHGAP29-202ENST00000370217 EEA1Q15075 1411 aa38.43■■■■□ 3.74
ARHGAP29-202ENST00000370217 CSRNP3Q8WYN3 585 aa38.38■■■■□ 3.73
ARHGAP29-202ENST00000370217 FGD5Q6ZNL6 1462 aa38.37■■■■□ 3.73
ARHGAP29-202ENST00000370217 DNMBPQ6XZF7 1577 aa38.37■■■■□ 3.73
ARHGAP29-202ENST00000370217 TOPBP1Q92547 1522 aa38.36■■■■□ 3.73
ARHGAP29-202ENST00000370217 URB2Q14146 1524 aaKnown RBP38.35■■■■□ 3.73
ARHGAP29-202ENST00000370217 POLA1P09884 1462 aaPredicted RBP38.2■■■■□ 3.71
ARHGAP29-202ENST00000370217 RAD54L2Q9Y4B4 1467 aa38.15■■■■□ 3.7
ARHGAP29-202ENST00000370217 KIF27Q86VH2 1401 aa38.11■■■■□ 3.69
ARHGAP29-202ENST00000370217 CUX2O14529 1486 aa38.1■■■■□ 3.69
ARHGAP29-202ENST00000370217 KIF21BO75037 1637 aa38.06■■■■□ 3.68
ARHGAP29-202ENST00000370217 GOLGA3Q08378 1498 aa38.02■■■■□ 3.68
ARHGAP29-202ENST00000370217 MRC2Q9UBG0 1479 aa38.01■■■■□ 3.68
ARHGAP29-202ENST00000370217 RAPGEF2Q9Y4G8 1499 aa37.99■■■■□ 3.67
ARHGAP29-202ENST00000370217 ABCA10Q8WWZ4 1543 aa37.97■■■■□ 3.67
ARHGAP29-202ENST00000370217 PRXQ9BXM0 1461 aa37.94■■■■□ 3.66
ARHGAP29-202ENST00000370217 TNIKQ9UKE5 1360 aa37.91■■■■□ 3.66
ARHGAP29-202ENST00000370217 UBTFP17480 764 aaKnown RBP37.9■■■■□ 3.66
ARHGAP29-202ENST00000370217 WDR97A6NE52 1622 aa37.9■■■■□ 3.66
ARHGAP29-202ENST00000370217 ERCC6Q03468 1493 aa37.89■■■■□ 3.66
ARHGAP29-202ENST00000370217 IGF1RP08069 1367 aa37.89■■■■□ 3.66
ARHGAP29-202ENST00000370217 WDR62O43379 1518 aa37.83■■■■□ 3.65
ARHGAP29-202ENST00000370217 TARBP1Q13395 1621 aaKnown RBP37.81■■■■□ 3.64
ARHGAP29-202ENST00000370217 CEP162Q5TB80 1403 aa37.78■■■■□ 3.64
ARHGAP29-202ENST00000370217 THOC2Q8NI27 1593 aaKnown RBP37.78■■■■□ 3.64
ARHGAP29-202ENST00000370217 ERICH3Q5RHP9 1530 aa37.78■■■■□ 3.64
ARHGAP29-202ENST00000370217 TDRD9Q8NDG6 1382 aaKnown RBP37.75■■■■□ 3.63
ARHGAP29-202ENST00000370217 ABCA5Q8WWZ7 1642 aa37.7■■■■□ 3.63
ARHGAP29-202ENST00000370217 CARMIL1Q5VZK9 1371 aa37.64■■■■□ 3.62
ARHGAP29-202ENST00000370217 GAPVD1Q14C86 1478 aa37.59■■■■□ 3.61
ARHGAP29-202ENST00000370217 ZNF608Q9ULD9 1512 aaPredicted RBP37.52■■■■□ 3.6
ARHGAP29-202ENST00000370217 AQRO60306 1485 aaKnown RBP eCLIP37.52■■■■□ 3.6
ARHGAP29-202ENST00000370217 IFT140Q96RY7 1462 aa37.51■■■■□ 3.6
ARHGAP29-202ENST00000370217 RANGAP1P46060 587 aaPredicted RBP37.48■■■■□ 3.59
ARHGAP29-202ENST00000370217 CUL7Q14999 1698 aa37.46■■■■□ 3.59
ARHGAP29-202ENST00000370217 CLIP1P30622 1438 aa37.46■■■■□ 3.59
ARHGAP29-202ENST00000370217 PBRM1Q86U86 1689 aa37.4■■■■□ 3.58
ARHGAP29-202ENST00000370217 EIF4G3O43432 1585 aaKnown RBP37.3■■■■□ 3.56
ARHGAP29-202ENST00000370217 GRIN2BQ13224 1484 aa37.26■■■■□ 3.56
ARHGAP29-202ENST00000370217 PPARGC1BQ86YN6 1023 aaKnown RBP37.22■■■■□ 3.55
ARHGAP29-202ENST00000370217 ADAMTS12P58397 1594 aa37.2■■■■□ 3.55
ARHGAP29-202ENST00000370217 ARAP1Q96P48 1450 aa37.18■■■■□ 3.54
ARHGAP29-202ENST00000370217 ARHGAP35Q9NRY4 1499 aa37.16■■■■□ 3.54
ARHGAP29-202ENST00000370217 FHAD1B1AJZ9 1412 aa37.14■■■■□ 3.54
ARHGAP29-202ENST00000370217 VPS8Q8N3P4 1428 aa37.11■■■■□ 3.53
ARHGAP29-202ENST00000370217 SNAPC4Q5SXM2 1469 aa37.11■■■■□ 3.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms