RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 PELP1Q8IZL8 1130 aaKnown RBP32.44■■■□□ 2.78
CACNA1A-257ENST00000638009 MYT1Q01538 1121 aa30.9■■■□□ 2.54
CACNA1A-257ENST00000638009 CCER1Q8TC90 406 aaPredicted RBP30.82■■■□□ 2.52
CACNA1A-257ENST00000638009 DCAF8L2P0C7V8 631 aa30.71■■■□□ 2.51
CACNA1A-257ENST00000638009 ERICH6Q7L0X2 663 aa30.61■■■□□ 2.49
CACNA1A-257ENST00000638009 YTHDC1Q96MU7 727 aaKnown RBP30.01■■■□□ 2.39
CACNA1A-257ENST00000638009 CENPBP07199 599 aaPredicted RBP29.9■■■□□ 2.38
CACNA1A-257ENST00000638009 APLP2Q06481 763 aa29.83■■■□□ 2.37
CACNA1A-257ENST00000638009 FAM9AQ8IZU1 332 aaPredicted RBP29.82■■■□□ 2.36
CACNA1A-257ENST00000638009 NEFLP07196 543 aa29.45■■■□□ 2.31
CACNA1A-257ENST00000638009 SUPT5HO00267 1087 aaKnown RBP29.3■■■□□ 2.28
CACNA1A-257ENST00000638009 ZEB1P37275 1124 aaPredicted RBP29.27■■■□□ 2.28
CACNA1A-257ENST00000638009 DAXXQ9UER7 740 aaPredicted RBP29.22■■■□□ 2.27
CACNA1A-257ENST00000638009 TTBK1Q5TCY1 1321 aaPredicted RBP29.17■■■□□ 2.26
CACNA1A-257ENST00000638009 EHMT2Q96KQ7 1210 aa28.6■■■□□ 2.17
CACNA1A-257ENST00000638009 PCGF6Q9BYE7 350 aa28.51■■■□□ 2.16
CACNA1A-257ENST00000638009 RTL5Q5HYW3 569 aaPredicted RBP28.44■■■□□ 2.14
CACNA1A-257ENST00000638009 ZNF316A6NFI3 1004 aaPredicted RBP28.32■■■□□ 2.12
CACNA1A-257ENST00000638009 SHROOM4Q9ULL8 1493 aa28.11■■■□□ 2.09
CACNA1A-257ENST00000638009 ATP1B4Q9UN42 357 aaPredicted RBP27.84■■■□□ 2.05
CACNA1A-257ENST00000638009 CLSPNQ9HAW4 1339 aa27.83■■■□□ 2.05
CACNA1A-257ENST00000638009 GLIPR1L2Q4G1C9 344 aa27.74■■■□□ 2.03
CACNA1A-257ENST00000638009 NISCHQ9Y2I1 1504 aa27.53■■■□□ 2
CACNA1A-257ENST00000638009 UBTFP17480 764 aaKnown RBP27.53■■■□□ 2
CACNA1A-257ENST00000638009 TRIM41Q8WV44 630 aa27.47■■□□□ 1.99
CACNA1A-257ENST00000638009 ZBTB47Q9UFB7 747 aaPredicted RBP27.46■■□□□ 1.99
CACNA1A-257ENST00000638009 RANGAP1P46060 587 aaPredicted RBP27.44■■□□□ 1.98
CACNA1A-257ENST00000638009 ANP32BQ92688 251 aaKnown RBP27.4■■□□□ 1.98
CACNA1A-257ENST00000638009 POLR3GLQ9BT43 218 aa27.27■■□□□ 1.96
CACNA1A-257ENST00000638009 TRIM26Q12899 539 aaPredicted RBP27.23■■□□□ 1.95
CACNA1A-257ENST00000638009 CDK11AQ9UQ88 783 aaPredicted RBP27.15■■□□□ 1.94
CACNA1A-257ENST00000638009 MYT1LQ9UL68 1186 aa27.15■■□□□ 1.94
CACNA1A-257ENST00000638009 SLC4A1APQ9BWU0 796 aaKnown RBP27.12■■□□□ 1.93
CACNA1A-257ENST00000638009 HRCP23327 699 aa27.03■■□□□ 1.92
CACNA1A-257ENST00000638009 NEFMP07197 916 aa27.03■■□□□ 1.92
CACNA1A-257ENST00000638009 ANP32AP39687 249 aaKnown RBP26.99■■□□□ 1.91
CACNA1A-257ENST00000638009 EIF5BO60841 1220 aaKnown RBP26.92■■□□□ 1.9
CACNA1A-257ENST00000638009 DIEXFQ68CQ4 756 aaKnown RBP26.78■■□□□ 1.88
CACNA1A-257ENST00000638009 CANXP27824 592 aaKnown RBP26.76■■□□□ 1.87
CACNA1A-257ENST00000638009 HSP90AA1P07900 732 aaKnown RBP26.73■■□□□ 1.87
CACNA1A-257ENST00000638009 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.71■■□□□ 1.87
CACNA1A-257ENST00000638009 HNRNPUL2Q1KMD3 747 aaKnown RBP26.71■■□□□ 1.87
CACNA1A-257ENST00000638009 TNNT2P45379 298 aaPredicted RBP26.69■■□□□ 1.86
CACNA1A-257ENST00000638009 UPF2Q9HAU5 1272 aaKnown RBP26.68■■□□□ 1.86
CACNA1A-257ENST00000638009 CDK11BP21127 795 aaKnown RBP26.68■■□□□ 1.86
CACNA1A-257ENST00000638009 CNGB1Q14028 1251 aaPredicted RBP26.6■■□□□ 1.85
CACNA1A-257ENST00000638009 ITGAEP38570 1179 aa26.6■■□□□ 1.85
CACNA1A-257ENST00000638009 ANP32CO43423 234 aa26.58■■□□□ 1.85
CACNA1A-257ENST00000638009 CHIC1Q5VXU3 224 aa26.44■■□□□ 1.82
CACNA1A-257ENST00000638009 SLC24A1O60721 1099 aa26.42■■□□□ 1.82
CACNA1A-257ENST00000638009 ANP32EQ9BTT0 268 aa26.3■■□□□ 1.8
CACNA1A-257ENST00000638009 PPARGC1BQ86YN6 1023 aaKnown RBP26.29■■□□□ 1.8
CACNA1A-257ENST00000638009 TRIM44Q96DX7 344 aaPredicted RBP26.28■■□□□ 1.8
CACNA1A-257ENST00000638009 GTF3C3Q9Y5Q9 886 aa26.27■■□□□ 1.8
CACNA1A-257ENST00000638009 BCANQ96GW7 911 aa26.19■■□□□ 1.78
CACNA1A-257ENST00000638009 BCL11AQ9H165 835 aa26.12■■□□□ 1.77
CACNA1A-257ENST00000638009 NPM2Q86SE8 214 aaKnown RBP26.09■■□□□ 1.77
CACNA1A-257ENST00000638009 TRIM52Q96A61 297 aa26.04■■□□□ 1.76
CACNA1A-257ENST00000638009 NCLP19338 710 aaKnown RBP26.01■■□□□ 1.75
CACNA1A-257ENST00000638009 FAM50AQ14320 339 aaKnown RBP26.01■■□□□ 1.75
CACNA1A-257ENST00000638009 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.99■■□□□ 1.75
CACNA1A-257ENST00000638009 GOLGA6L22H0YM25 854 aa25.93■■□□□ 1.74
CACNA1A-257ENST00000638009 ZRSR1Q15695 479 aaKnown RBP25.9■■□□□ 1.74
CACNA1A-257ENST00000638009 BECN1Q14457 450 aa25.89■■□□□ 1.73
CACNA1A-257ENST00000638009 NEUROD1Q13562 356 aa25.84■■□□□ 1.73
CACNA1A-257ENST00000638009 MYH16Q9H6N6 1097 aa25.82■■□□□ 1.72
CACNA1A-257ENST00000638009 DDRGK1Q96HY6 314 aa25.81■■□□□ 1.72
CACNA1A-257ENST00000638009 ZNF326Q5BKZ1 582 aaKnown RBP25.8■■□□□ 1.72
CACNA1A-257ENST00000638009 ERICH6BQ5W0A0 696 aa25.79■■□□□ 1.72
CACNA1A-257ENST00000638009 GOLGA6L6A8MZA4 724 aa25.76■■□□□ 1.71
CACNA1A-257ENST00000638009 NBR1Q14596 966 aa25.73■■□□□ 1.71
CACNA1A-257ENST00000638009 NRDCO43847 1150 aa25.72■■□□□ 1.71
CACNA1A-257ENST00000638009 ACIN1Q9UKV3 1341 aaKnown RBP25.72■■□□□ 1.71
CACNA1A-257ENST00000638009 DNTTIP2Q5QJE6 756 aaKnown RBP25.72■■□□□ 1.71
CACNA1A-257ENST00000638009 PTMAP06454 111 aaKnown RBP25.67■■□□□ 1.7
CACNA1A-257ENST00000638009 L1TD1Q5T7N2 865 aaKnown RBP25.66■■□□□ 1.7
CACNA1A-257ENST00000638009 CCDC136Q96JN2 1154 aa25.63■■□□□ 1.69
CACNA1A-257ENST00000638009 ARXQ96QS3 562 aa25.63■■□□□ 1.69
CACNA1A-257ENST00000638009 CHAF1AQ13111 956 aaPredicted RBP25.62■■□□□ 1.69
CACNA1A-257ENST00000638009 CASC1Q6TDU7 716 aa25.55■■□□□ 1.68
CACNA1A-257ENST00000638009 FKBP8Q14318 412 aa25.52■■□□□ 1.68
CACNA1A-257ENST00000638009 ESF1Q9H501 851 aaKnown RBP25.42■■□□□ 1.66
CACNA1A-257ENST00000638009 NAP1L5Q96NT1 182 aaPredicted RBP25.41■■□□□ 1.66
CACNA1A-257ENST00000638009 HNRNPUQ00839 825 aaKnown RBP eCLIP25.38■■□□□ 1.65
CACNA1A-257ENST00000638009 TONSLQ96HA7 1378 aa25.35■■□□□ 1.65
CACNA1A-257ENST00000638009 WDR43Q15061 677 aaKnown RBP eCLIP25.35■■□□□ 1.65
CACNA1A-257ENST00000638009 USP35Q9P2H5 1018 aa25.35■■□□□ 1.65
CACNA1A-257ENST00000638009 TMC1Q8TDI8 760 aa25.33■■□□□ 1.65
CACNA1A-257ENST00000638009 LOC105371045A0A1W2PR82 267 aa25.33■■□□□ 1.65
CACNA1A-257ENST00000638009 PPM1GO15355 546 aaPredicted RBP25.3■■□□□ 1.64
CACNA1A-257ENST00000638009 KIAA2012Q0VF49 1180 aa25.22■■□□□ 1.63
CACNA1A-257ENST00000638009 MSNP26038 577 aaKnown RBP25.21■■□□□ 1.63
CACNA1A-257ENST00000638009 STAG3Q9UJ98 1225 aa25.21■■□□□ 1.63
CACNA1A-257ENST00000638009 TNNT3P45378 269 aaPredicted RBP25.17■■□□□ 1.62
CACNA1A-257ENST00000638009 CHMP4BQ9H444 224 aaKnown RBP25.14■■□□□ 1.61
CACNA1A-257ENST00000638009 CALRP27797 417 aaKnown RBP25.13■■□□□ 1.61
CACNA1A-257ENST00000638009 FAM9BQ8IZU0 186 aa25.1■■□□□ 1.61
CACNA1A-257ENST00000638009 NOC3LQ8WTT2 800 aaKnown RBP25.09■■□□□ 1.61
CACNA1A-257ENST00000638009 PTMSP20962 102 aa25.07■■□□□ 1.6
CACNA1A-257ENST00000638009 GOLGA6L1Q8N7Z2 621 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms