Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CGB1A6NKQ9 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CGB1A6NKQ9 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CGB1A6NKQ9 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CGB1A6NKQ9 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CGB1A6NKQ9 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CGB1A6NKQ9 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CGB1A6NKQ9 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CGB1A6NKQ9 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CGB1A6NKQ9 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CGB1A6NKQ9 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC18.61■□□□□ 0.57
CGB1A6NKQ9 RARRES2P2-201ENST00000394842 485 ntBASIC18.61■□□□□ 0.57
CGB1A6NKQ9 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.61■□□□□ 0.57
CGB1A6NKQ9 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CGB1A6NKQ9 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.6■□□□□ 0.57
CGB1A6NKQ9 AC141586.4-201ENST00000624558 1573 ntBASIC18.6■□□□□ 0.57
CGB1A6NKQ9 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.6■□□□□ 0.57
CGB1A6NKQ9 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC18.6■□□□□ 0.57
CGB1A6NKQ9 HSD17B1P1-201ENST00000590052 955 ntBASIC18.6■□□□□ 0.57
CGB1A6NKQ9 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CGB1A6NKQ9 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CGB1A6NKQ9 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.6■□□□□ 0.57
CGB1A6NKQ9 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CGB1A6NKQ9 HLA-L-211ENST00000482052 1765 ntBASIC18.6■□□□□ 0.57
CGB1A6NKQ9 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC18.6■□□□□ 0.57
CGB1A6NKQ9 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CGB1A6NKQ9 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CGB1A6NKQ9 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CGB1A6NKQ9 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
CGB1A6NKQ9 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CGB1A6NKQ9 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CGB1A6NKQ9 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC18.59■□□□□ 0.57
CGB1A6NKQ9 RPS2P7-201ENST00000447334 885 ntBASIC18.59■□□□□ 0.57
CGB1A6NKQ9 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CGB1A6NKQ9 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CGB1A6NKQ9 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CGB1A6NKQ9 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CGB1A6NKQ9 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CGB1A6NKQ9 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
CGB1A6NKQ9 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC18.58■□□□□ 0.56
CGB1A6NKQ9 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CGB1A6NKQ9 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CGB1A6NKQ9 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
CGB1A6NKQ9 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CGB1A6NKQ9 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CGB1A6NKQ9 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CGB1A6NKQ9 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CGB1A6NKQ9 AC004812.2-201ENST00000611079 2094 ntBASIC18.58■□□□□ 0.56
CGB1A6NKQ9 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CGB1A6NKQ9 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC18.57■□□□□ 0.56
CGB1A6NKQ9 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CGB1A6NKQ9 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CGB1A6NKQ9 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CGB1A6NKQ9 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CGB1A6NKQ9 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC18.57■□□□□ 0.56
CGB1A6NKQ9 U85056.1-201ENST00000616429 682 ntBASIC18.57■□□□□ 0.56
CGB1A6NKQ9 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CGB1A6NKQ9 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CGB1A6NKQ9 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CGB1A6NKQ9 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CGB1A6NKQ9 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC18.56■□□□□ 0.56
CGB1A6NKQ9 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CGB1A6NKQ9 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC18.56■□□□□ 0.56
CGB1A6NKQ9 DUX4L9-201ENST00000449051 1259 ntBASIC18.56■□□□□ 0.56
CGB1A6NKQ9 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CGB1A6NKQ9 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.56■□□□□ 0.56
CGB1A6NKQ9 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CGB1A6NKQ9 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CGB1A6NKQ9 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CGB1A6NKQ9 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CGB1A6NKQ9 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CGB1A6NKQ9 AC018755.3-202ENST00000596210 929 ntBASIC18.55■□□□□ 0.56
CGB1A6NKQ9 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CGB1A6NKQ9 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CGB1A6NKQ9 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CGB1A6NKQ9 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC18.54■□□□□ 0.56
CGB1A6NKQ9 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CGB1A6NKQ9 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CGB1A6NKQ9 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC18.54■□□□□ 0.56
CGB1A6NKQ9 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CGB1A6NKQ9 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CGB1A6NKQ9 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.54■□□□□ 0.56
CGB1A6NKQ9 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CGB1A6NKQ9 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CGB1A6NKQ9 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CGB1A6NKQ9 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC18.53■□□□□ 0.56
CGB1A6NKQ9 AC087393.1-201ENST00000582896 145 ntBASIC18.53■□□□□ 0.56
CGB1A6NKQ9 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CGB1A6NKQ9 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CGB1A6NKQ9 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.53■□□□□ 0.56
CGB1A6NKQ9 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CGB1A6NKQ9 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CGB1A6NKQ9 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC18.52■□□□□ 0.56
CGB1A6NKQ9 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CGB1A6NKQ9 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CGB1A6NKQ9 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.52■□□□□ 0.56
CGB1A6NKQ9 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC18.52■□□□□ 0.56
CGB1A6NKQ9 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
CGB1A6NKQ9 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CGB1A6NKQ9 MIR6765-201ENST00000614092 87 ntBASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms