Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.2□□□□□ -0.3
GAFA1Q96PS6 AC074044.1-201ENST00000609673 707 ntBASIC13.2□□□□□ -0.3
GAFA1Q96PS6 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
GAFA1Q96PS6 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.2□□□□□ -0.3
GAFA1Q96PS6 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
GAFA1Q96PS6 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
GAFA1Q96PS6 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
GAFA1Q96PS6 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.2□□□□□ -0.3
GAFA1Q96PS6 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
GAFA1Q96PS6 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GAFA1Q96PS6 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
GAFA1Q96PS6 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
GAFA1Q96PS6 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.2□□□□□ -0.3
GAFA1Q96PS6 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
GAFA1Q96PS6 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
GAFA1Q96PS6 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GAFA1Q96PS6 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.19□□□□□ -0.3
GAFA1Q96PS6 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
GAFA1Q96PS6 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GAFA1Q96PS6 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
GAFA1Q96PS6 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GAFA1Q96PS6 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.19□□□□□ -0.3
GAFA1Q96PS6 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GAFA1Q96PS6 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GAFA1Q96PS6 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GAFA1Q96PS6 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GAFA1Q96PS6 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
GAFA1Q96PS6 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.19□□□□□ -0.3
GAFA1Q96PS6 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC13.19□□□□□ -0.3
GAFA1Q96PS6 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GAFA1Q96PS6 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
GAFA1Q96PS6 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GAFA1Q96PS6 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GAFA1Q96PS6 MIR770-201ENST00000390219 98 ntBASIC13.19□□□□□ -0.3
GAFA1Q96PS6 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GAFA1Q96PS6 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.19□□□□□ -0.3
GAFA1Q96PS6 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.19□□□□□ -0.3
GAFA1Q96PS6 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.19□□□□□ -0.3
GAFA1Q96PS6 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.19□□□□□ -0.3
GAFA1Q96PS6 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.19□□□□□ -0.3
GAFA1Q96PS6 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.19□□□□□ -0.3
GAFA1Q96PS6 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.19□□□□□ -0.3
GAFA1Q96PS6 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.19□□□□□ -0.3
GAFA1Q96PS6 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.19□□□□□ -0.3
GAFA1Q96PS6 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.19□□□□□ -0.3
GAFA1Q96PS6 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.19□□□□□ -0.3
GAFA1Q96PS6 AC009407.1-201ENST00000568958 598 ntBASIC13.19□□□□□ -0.3
GAFA1Q96PS6 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
GAFA1Q96PS6 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
GAFA1Q96PS6 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.19□□□□□ -0.3
GAFA1Q96PS6 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.19□□□□□ -0.3
GAFA1Q96PS6 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GAFA1Q96PS6 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
GAFA1Q96PS6 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.19□□□□□ -0.3
GAFA1Q96PS6 AC022144.1-201ENST00000602255 1580 ntBASIC13.19□□□□□ -0.3
GAFA1Q96PS6 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
GAFA1Q96PS6 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.19□□□□□ -0.3
GAFA1Q96PS6 AC132872.4-202ENST00000622924 2756 ntBASIC13.19□□□□□ -0.3
GAFA1Q96PS6 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC13.19□□□□□ -0.3
GAFA1Q96PS6 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
GAFA1Q96PS6 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GAFA1Q96PS6 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.19□□□□□ -0.3
GAFA1Q96PS6 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GAFA1Q96PS6 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
GAFA1Q96PS6 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GAFA1Q96PS6 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GAFA1Q96PS6 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC13.18□□□□□ -0.3
GAFA1Q96PS6 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GAFA1Q96PS6 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GAFA1Q96PS6 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GAFA1Q96PS6 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
GAFA1Q96PS6 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GAFA1Q96PS6 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC13.18□□□□□ -0.3
GAFA1Q96PS6 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
GAFA1Q96PS6 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GAFA1Q96PS6 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
GAFA1Q96PS6 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GAFA1Q96PS6 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GAFA1Q96PS6 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC13.18□□□□□ -0.3
GAFA1Q96PS6 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GAFA1Q96PS6 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
GAFA1Q96PS6 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
GAFA1Q96PS6 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GAFA1Q96PS6 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.18□□□□□ -0.3
GAFA1Q96PS6 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
GAFA1Q96PS6 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.18□□□□□ -0.3
GAFA1Q96PS6 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GAFA1Q96PS6 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
GAFA1Q96PS6 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GAFA1Q96PS6 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
GAFA1Q96PS6 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.18□□□□□ -0.3
GAFA1Q96PS6 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
GAFA1Q96PS6 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.18□□□□□ -0.3
GAFA1Q96PS6 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC13.18□□□□□ -0.3
GAFA1Q96PS6 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.18□□□□□ -0.3
GAFA1Q96PS6 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GAFA1Q96PS6 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GAFA1Q96PS6 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GAFA1Q96PS6 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.18□□□□□ -0.3
GAFA1Q96PS6 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms