RNA–Protein interactions for RNA: ENST00000458022.6

SHF-202, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHF, Length 1,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-202ENST00000458022 NISCHQ9Y2I1 1504 aa41.61■■■■■ 4.25
SHF-202ENST00000458022 ABCC9O60706 1549 aa38.02■■■■□ 3.68
SHF-202ENST00000458022 CCDC180Q9P1Z9 1646 aa37.5■■■■□ 3.59
SHF-202ENST00000458022 DNAJC5BQ9UF47 199 aa36.16■■■■□ 3.38
SHF-202ENST00000458022 RB1CC1Q8TDY2 1594 aa35.96■■■■□ 3.35
SHF-202ENST00000458022 NACADO15069 1562 aa35.62■■■■□ 3.29
SHF-202ENST00000458022 PABPN1Q86U42 306 aaKnown RBP eCLIP35.33■■■■□ 3.25
SHF-202ENST00000458022 DCAF8L2P0C7V8 631 aa35.28■■■■□ 3.24
SHF-202ENST00000458022 MYO15BQ96JP2 1530 aa35.02■■■■□ 3.2
SHF-202ENST00000458022 UNC13AQ9UPW8 1703 aa35.01■■■■□ 3.2
SHF-202ENST00000458022 BICRAQ9NZM4 1560 aa34.95■■■■□ 3.18
SHF-202ENST00000458022 SHROOM4Q9ULL8 1493 aa34.5■■■■□ 3.11
SHF-202ENST00000458022 ZCCHC6Q5VYS8 1495 aaKnown RBP34.39■■■■□ 3.1
SHF-202ENST00000458022 DCAF1Q9Y4B6 1507 aa34.37■■■■□ 3.09
SHF-202ENST00000458022 CECR2Q9BXF3 1484 aa34.33■■■■□ 3.09
SHF-202ENST00000458022 CC2D2AQ9P2K1 1620 aa34.3■■■■□ 3.08
SHF-202ENST00000458022 EIF4G1Q04637 1599 aaKnown RBP34.13■■■■□ 3.05
SHF-202ENST00000458022 SCRIBQ14160 1630 aa34.12■■■■□ 3.05
SHF-202ENST00000458022 DNAJC5Q9H3Z4 198 aa33.59■■■□□ 2.97
SHF-202ENST00000458022 CUX2O14529 1486 aa33.02■■■□□ 2.88
SHF-202ENST00000458022 NCAPD3P42695 1498 aa32.94■■■□□ 2.86
SHF-202ENST00000458022 ERCC6Q03468 1493 aa32.86■■■□□ 2.85
SHF-202ENST00000458022 ATAD2BQ9ULI0 1458 aa32.74■■■□□ 2.83
SHF-202ENST00000458022 HMGXB3Q12766 1538 aa32.61■■■□□ 2.81
SHF-202ENST00000458022 SMARCA2P51531 1590 aa32.59■■■□□ 2.81
SHF-202ENST00000458022 SMARCA4P51532 1647 aa32.52■■■□□ 2.8
SHF-202ENST00000458022 NESP48681 1621 aa32.51■■■□□ 2.8
SHF-202ENST00000458022 BAZ1BQ9UIG0 1483 aaKnown RBP32.37■■■□□ 2.77
SHF-202ENST00000458022 BAZ1AQ9NRL2 1556 aaPredicted RBP32.32■■■□□ 2.77
SHF-202ENST00000458022 THOC2Q8NI27 1593 aaKnown RBP32.28■■■□□ 2.76
SHF-202ENST00000458022 PEG3Q9GZU2 1588 aa32.27■■■□□ 2.76
SHF-202ENST00000458022 LAMC3Q9Y6N6 1575 aa32.21■■■□□ 2.75
SHF-202ENST00000458022 PDS5BQ9NTI5 1447 aa32.09■■■□□ 2.73
SHF-202ENST00000458022 MROH2BQ7Z745 1585 aa32.04■■■□□ 2.72
SHF-202ENST00000458022 KIF21AQ7Z4S6 1674 aa31.99■■■□□ 2.71
SHF-202ENST00000458022 CADPSQ9ULU8 1353 aa31.91■■■□□ 2.7
SHF-202ENST00000458022 TRIM41Q8WV44 630 aa31.84■■■□□ 2.69
SHF-202ENST00000458022 MRC2Q9UBG0 1479 aa31.83■■■□□ 2.69
SHF-202ENST00000458022 WDR62O43379 1518 aa31.76■■■□□ 2.68
SHF-202ENST00000458022 CEP164Q9UPV0 1460 aa31.59■■■□□ 2.65
SHF-202ENST00000458022 WIZO95785 1651 aa31.57■■■□□ 2.64
SHF-202ENST00000458022 FANCD2Q9BXW9 1451 aa31.51■■■□□ 2.63
SHF-202ENST00000458022 CFTRP13569 1480 aa31.44■■■□□ 2.62
SHF-202ENST00000458022 OSCARQ8IYS5 282 aa31.43■■■□□ 2.62
SHF-202ENST00000458022 URB2Q14146 1524 aaKnown RBP31.29■■■□□ 2.6
SHF-202ENST00000458022 RSF1Q96T23 1441 aaPredicted RBP31.23■■■□□ 2.59
SHF-202ENST00000458022 TOP2AP11388 1531 aaKnown RBP31.2■■■□□ 2.59
SHF-202ENST00000458022 IFT140Q96RY7 1462 aa31■■■□□ 2.55
SHF-202ENST00000458022 RIMBP3CA6NJZ7 1639 aa30.99■■■□□ 2.55
SHF-202ENST00000458022 RIMBP3BA6NNM3 1639 aa30.99■■■□□ 2.55
SHF-202ENST00000458022 RIMBP3Q9UFD9 1639 aa30.99■■■□□ 2.55
SHF-202ENST00000458022 ZNF608Q9ULD9 1512 aaPredicted RBP30.97■■■□□ 2.55
SHF-202ENST00000458022 ARHGEF11O15085 1522 aa30.9■■■□□ 2.54
SHF-202ENST00000458022 PRDM2Q13029 1718 aa30.89■■■□□ 2.54
SHF-202ENST00000458022 CCDC88BA6NC98 1476 aa30.86■■■□□ 2.53
SHF-202ENST00000458022 TOPBP1Q92547 1522 aa30.85■■■□□ 2.53
SHF-202ENST00000458022 ABCC8Q09428 1581 aa30.77■■■□□ 2.52
SHF-202ENST00000458022 EIF4G3O43432 1585 aaKnown RBP30.74■■■□□ 2.51
SHF-202ENST00000458022 CYB5RLQ6IPT4 315 aa30.7■■■□□ 2.51
SHF-202ENST00000458022 DNMBPQ6XZF7 1577 aa30.68■■■□□ 2.5
SHF-202ENST00000458022 AQRO60306 1485 aaKnown RBP eCLIP30.63■■■□□ 2.493e-9■■■■■ 36.3
SHF-202ENST00000458022 TARBP1Q13395 1621 aaKnown RBP30.59■■■□□ 2.49
SHF-202ENST00000458022 ARAP1Q96P48 1450 aa30.57■■■□□ 2.48
SHF-202ENST00000458022 CHD1O14646 1710 aa30.53■■■□□ 2.48
SHF-202ENST00000458022 POLA1P09884 1462 aaPredicted RBP30.52■■■□□ 2.48
SHF-202ENST00000458022 TRHP20396 242 aaPredicted RBP30.5■■■□□ 2.47
SHF-202ENST00000458022 FBLN2P98095 1184 aa30.5■■■□□ 2.47
SHF-202ENST00000458022 RAD54L2Q9Y4B4 1467 aa30.4■■■□□ 2.46
SHF-202ENST00000458022 TDRD9Q8NDG6 1382 aaKnown RBP30.38■■■□□ 2.45
SHF-202ENST00000458022 SOGA1O94964 1423 aa30.37■■■□□ 2.45
SHF-202ENST00000458022 SNAPC4Q5SXM2 1469 aa30.3■■■□□ 2.44
SHF-202ENST00000458022 CLASP1Q7Z460 1538 aa30.29■■■□□ 2.44
SHF-202ENST00000458022 WDR97A6NE52 1622 aa30.27■■■□□ 2.44
SHF-202ENST00000458022 FGD5Q6ZNL6 1462 aa30.24■■■□□ 2.43
SHF-202ENST00000458022 CHMP7Q8WUX9 453 aaPredicted RBP30.23■■■□□ 2.43
SHF-202ENST00000458022 MAGI1Q96QZ7 1491 aaPredicted RBP30.22■■■□□ 2.43
SHF-202ENST00000458022 SYNJ1O43426 1573 aa30.2■■■□□ 2.42
SHF-202ENST00000458022 GRIN2BQ13224 1484 aa30.17■■■□□ 2.42
SHF-202ENST00000458022 SYNJ2O15056 1496 aa30.13■■■□□ 2.41
SHF-202ENST00000458022 CUX1P39880 1505 aa30.12■■■□□ 2.41
SHF-202ENST00000458022 GAPVD1Q14C86 1478 aa30■■■□□ 2.39
SHF-202ENST00000458022 AEBP2Q6ZN18 517 aaPredicted RBP29.98■■■□□ 2.39
SHF-202ENST00000458022 ABCA10Q8WWZ4 1543 aa29.89■■■□□ 2.38
SHF-202ENST00000458022 PBRM1Q86U86 1689 aa29.88■■■□□ 2.37
SHF-202ENST00000458022 ABCA5Q8WWZ7 1642 aa29.85■■■□□ 2.37
SHF-202ENST00000458022 GRIN2AQ12879 1464 aa29.77■■■□□ 2.36
SHF-202ENST00000458022 ERCC6L2Q5T890 1561 aa29.74■■■□□ 2.35
SHF-202ENST00000458022 NUP160Q12769 1436 aa29.73■■■□□ 2.35
SHF-202ENST00000458022 WRNQ14191 1432 aaPredicted RBP eCLIP29.68■■■□□ 2.34
SHF-202ENST00000458022 CEP170Q5SW79 1584 aa29.68■■■□□ 2.34
SHF-202ENST00000458022 ADAMTS12P58397 1594 aa29.66■■■□□ 2.34
SHF-202ENST00000458022 FHAD1B1AJZ9 1412 aa29.61■■■□□ 2.33
SHF-202ENST00000458022 SHROOM2Q13796 1616 aa29.6■■■□□ 2.33
SHF-202ENST00000458022 ERICH3Q5RHP9 1530 aa29.5■■■□□ 2.31
SHF-202ENST00000458022 TOP2BQ02880 1626 aa29.49■■■□□ 2.31
SHF-202ENST00000458022 BIVM-ERCC5R4GMW8 1640 aa29.47■■■□□ 2.31
SHF-202ENST00000458022 PRG4Q92954 1404 aaPredicted RBP29.45■■■□□ 2.31
SHF-202ENST00000458022 SUPT5HO00267 1087 aaKnown RBP29.4■■■□□ 2.3
SHF-202ENST00000458022 JPH4Q96JJ6 628 aa29.4■■■□□ 2.3
SHF-202ENST00000458022 KIF13AQ9H1H9 1805 aa29.38■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms