RNA–Protein interactions for RNA: ENST00000394555.6

EFEMP1-202, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFEMP1, Length 3,024 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-202ENST00000394555 NISCHQ9Y2I1 1504 aa31.79■■■□□ 2.68
EFEMP1-202ENST00000394555 SHROOM4Q9ULL8 1493 aa28.16■■■□□ 2.1
EFEMP1-202ENST00000394555 SUPT5HO00267 1087 aaKnown RBP27.95■■■□□ 2.06
EFEMP1-202ENST00000394555 HRCP23327 699 aa27.53■■■□□ 2
EFEMP1-202ENST00000394555 PCGF6Q9BYE7 350 aa27.29■■□□□ 1.96
EFEMP1-202ENST00000394555 MYO15BQ96JP2 1530 aa27.28■■□□□ 1.96
EFEMP1-202ENST00000394555 CHIC1Q5VXU3 224 aa27.23■■□□□ 1.95
EFEMP1-202ENST00000394555 PPARGC1BQ86YN6 1023 aaKnown RBP27.12■■□□□ 1.93
EFEMP1-202ENST00000394555 ZCCHC6Q5VYS8 1495 aaKnown RBP26.95■■□□□ 1.91
EFEMP1-202ENST00000394555 DCAF8L2P0C7V8 631 aa26.89■■□□□ 1.9
EFEMP1-202ENST00000394555 LOC105371045A0A1W2PR82 267 aa26.68■■□□□ 1.86
EFEMP1-202ENST00000394555 DCAF1Q9Y4B6 1507 aa26.51■■□□□ 1.83
EFEMP1-202ENST00000394555 CCDC180Q9P1Z9 1646 aa26.44■■□□□ 1.82
EFEMP1-202ENST00000394555 TRIM26Q12899 539 aaPredicted RBP26.39■■□□□ 1.81
EFEMP1-202ENST00000394555 ZEB1P37275 1124 aaPredicted RBP26■■□□□ 1.75
EFEMP1-202ENST00000394555 PELP1Q8IZL8 1130 aaKnown RBP25.93■■□□□ 1.74
EFEMP1-202ENST00000394555 SCAF1Q9H7N4 1312 aaKnown RBP25.89■■□□□ 1.74
EFEMP1-202ENST00000394555 FAM9AQ8IZU1 332 aaPredicted RBP25.89■■□□□ 1.74
EFEMP1-202ENST00000394555 EHMT2Q96KQ7 1210 aa25.87■■□□□ 1.73
EFEMP1-202ENST00000394555 TRIM41Q8WV44 630 aa25.82■■□□□ 1.72
EFEMP1-202ENST00000394555 ABCC9O60706 1549 aa25.54■■□□□ 1.68
EFEMP1-202ENST00000394555 RSF1Q96T23 1441 aaPredicted RBP25.52■■□□□ 1.68
EFEMP1-202ENST00000394555 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.42■■□□□ 1.66
EFEMP1-202ENST00000394555 RB1CC1Q8TDY2 1594 aa25.37■■□□□ 1.65
EFEMP1-202ENST00000394555 CCER1Q8TC90 406 aaPredicted RBP25.36■■□□□ 1.65
EFEMP1-202ENST00000394555 ACIN1Q9UKV3 1341 aaKnown RBP25.35■■□□□ 1.65
EFEMP1-202ENST00000394555 NEUROD1Q13562 356 aa25.34■■□□□ 1.65
EFEMP1-202ENST00000394555 SCRIBQ14160 1630 aa25.33■■□□□ 1.65
EFEMP1-202ENST00000394555 GTF3C3Q9Y5Q9 886 aa25.2■■□□□ 1.62
EFEMP1-202ENST00000394555 DIEXFQ68CQ4 756 aaKnown RBP25.17■■□□□ 1.62
EFEMP1-202ENST00000394555 TTBK1Q5TCY1 1321 aaPredicted RBP25.17■■□□□ 1.62
EFEMP1-202ENST00000394555 CENPBP07199 599 aaPredicted RBP25.11■■□□□ 1.61
EFEMP1-202ENST00000394555 CECR2Q9BXF3 1484 aa24.96■■□□□ 1.59
EFEMP1-202ENST00000394555 MROH2BQ7Z745 1585 aa24.86■■□□□ 1.57
EFEMP1-202ENST00000394555 YTHDC1Q96MU7 727 aaKnown RBP24.85■■□□□ 1.57
EFEMP1-202ENST00000394555 MYT1Q01538 1121 aa24.77■■□□□ 1.56
EFEMP1-202ENST00000394555 WIZO95785 1651 aa24.77■■□□□ 1.56
EFEMP1-202ENST00000394555 ZNF316A6NFI3 1004 aaPredicted RBP24.72■■□□□ 1.55
EFEMP1-202ENST00000394555 CEP162Q5TB80 1403 aa24.63■■□□□ 1.53
EFEMP1-202ENST00000394555 UBTFP17480 764 aaKnown RBP24.59■■□□□ 1.53
EFEMP1-202ENST00000394555 WRNQ14191 1432 aaPredicted RBP eCLIP24.58■■□□□ 1.53
EFEMP1-202ENST00000394555 MIER1Q8N108 512 aa24.56■■□□□ 1.52
EFEMP1-202ENST00000394555 CCDC88BA6NC98 1476 aa24.56■■□□□ 1.52
EFEMP1-202ENST00000394555 ABCC8Q09428 1581 aa24.56■■□□□ 1.52
EFEMP1-202ENST00000394555 HNRNPUL2Q1KMD3 747 aaKnown RBP24.5■■□□□ 1.51
EFEMP1-202ENST00000394555 SOGA1O94964 1423 aa24.5■■□□□ 1.51
EFEMP1-202ENST00000394555 BAZ1AQ9NRL2 1556 aaPredicted RBP24.48■■□□□ 1.51
EFEMP1-202ENST00000394555 EIF4G1Q04637 1599 aaKnown RBP24.46■■□□□ 1.51
EFEMP1-202ENST00000394555 TNIKQ9UKE5 1360 aa24.45■■□□□ 1.5
EFEMP1-202ENST00000394555 CSRNP3Q8WYN3 585 aa24.42■■□□□ 1.5
EFEMP1-202ENST00000394555 NACADO15069 1562 aa24.42■■□□□ 1.5
EFEMP1-202ENST00000394555 RUSC2Q8N2Y8 1516 aa24.35■■□□□ 1.49
EFEMP1-202ENST00000394555 TOP2AP11388 1531 aaKnown RBP24.22■■□□□ 1.47
EFEMP1-202ENST00000394555 RANGAP1P46060 587 aaPredicted RBP24.2■■□□□ 1.46
EFEMP1-202ENST00000394555 GOLGA3Q08378 1498 aa24.19■■□□□ 1.46
EFEMP1-202ENST00000394555 EEA1Q15075 1411 aa24.18■■□□□ 1.46
EFEMP1-202ENST00000394555 SMARCA2P51531 1590 aa24.16■■□□□ 1.46
EFEMP1-202ENST00000394555 APLP2Q06481 763 aa24.14■■□□□ 1.46
EFEMP1-202ENST00000394555 SMARCA4P51532 1647 aa24.05■■□□□ 1.44
EFEMP1-202ENST00000394555 CLIP1P30622 1438 aa24.05■■□□□ 1.44
EFEMP1-202ENST00000394555 SUPT16HQ9Y5B9 1047 aaKnown RBP24.02■■□□□ 1.44
EFEMP1-202ENST00000394555 CEP164Q9UPV0 1460 aa23.96■■□□□ 1.43
EFEMP1-202ENST00000394555 VPS8Q8N3P4 1428 aa23.94■■□□□ 1.42
EFEMP1-202ENST00000394555 CLSPNQ9HAW4 1339 aa23.82■■□□□ 1.4
EFEMP1-202ENST00000394555 DHX57Q6P158 1386 aaKnown RBP23.82■■□□□ 1.4
EFEMP1-202ENST00000394555 RAPGEF2Q9Y4G8 1499 aa23.81■■□□□ 1.4
EFEMP1-202ENST00000394555 TSHZ2Q9NRE2 1034 aa23.81■■□□□ 1.4
EFEMP1-202ENST00000394555 KIF21BO75037 1637 aa23.8■■□□□ 1.4
EFEMP1-202ENST00000394555 SYNJ1O43426 1573 aa23.79■■□□□ 1.4
EFEMP1-202ENST00000394555 PABPN1Q86U42 306 aaKnown RBP eCLIP23.77■■□□□ 1.4
EFEMP1-202ENST00000394555 BCANQ96GW7 911 aa23.71■■□□□ 1.39
EFEMP1-202ENST00000394555 KCNH8Q96L42 1107 aa23.71■■□□□ 1.39
EFEMP1-202ENST00000394555 KANK4Q5T7N3 995 aaPredicted RBP23.7■■□□□ 1.38
EFEMP1-202ENST00000394555 ITGAEP38570 1179 aa23.69■■□□□ 1.38
EFEMP1-202ENST00000394555 BAZ1BQ9UIG0 1483 aaKnown RBP23.68■■□□□ 1.38
EFEMP1-202ENST00000394555 ANP32EQ9BTT0 268 aa23.67■■□□□ 1.38
EFEMP1-202ENST00000394555 UNC13AQ9UPW8 1703 aa23.61■■□□□ 1.37
EFEMP1-202ENST00000394555 FKBP8Q14318 412 aa23.54■■□□□ 1.36
EFEMP1-202ENST00000394555 ARAP1Q96P48 1450 aa23.48■■□□□ 1.35
EFEMP1-202ENST00000394555 DDX10Q13206 875 aaKnown RBP23.47■■□□□ 1.35
EFEMP1-202ENST00000394555 CCNB3Q8WWL7 1395 aa23.42■■□□□ 1.34
EFEMP1-202ENST00000394555 RRBP1Q9P2E9 1410 aaKnown RBP23.42■■□□□ 1.34
EFEMP1-202ENST00000394555 BCL11AQ9H165 835 aa23.38■■□□□ 1.33
EFEMP1-202ENST00000394555 PEG3Q9GZU2 1588 aa23.36■■□□□ 1.33
EFEMP1-202ENST00000394555 RAB3GAP2Q9H2M9 1393 aa23.36■■□□□ 1.33
EFEMP1-202ENST00000394555 HIRIP3Q9BW71 556 aaPredicted RBP23.35■■□□□ 1.33
EFEMP1-202ENST00000394555 NEFLP07196 543 aa23.35■■□□□ 1.33
EFEMP1-202ENST00000394555 ATAD2BQ9ULI0 1458 aa23.35■■□□□ 1.33
EFEMP1-202ENST00000394555 TRIM52Q96A61 297 aa23.34■■□□□ 1.33
EFEMP1-202ENST00000394555 SIN3AQ96ST3 1273 aa23.34■■□□□ 1.33
EFEMP1-202ENST00000394555 PRXQ9BXM0 1461 aa23.34■■□□□ 1.33
EFEMP1-202ENST00000394555 TOP2BQ02880 1626 aa23.32■■□□□ 1.32
EFEMP1-202ENST00000394555 BICRAQ9NZM4 1560 aa23.31■■□□□ 1.32
EFEMP1-202ENST00000394555 RBM19Q9Y4C8 960 aaKnown RBP23.31■■□□□ 1.32
EFEMP1-202ENST00000394555 ERICH3Q5RHP9 1530 aa23.29■■□□□ 1.32
EFEMP1-202ENST00000394555 CUX2O14529 1486 aa23.29■■□□□ 1.32
EFEMP1-202ENST00000394555 MAPKBP1O60336 1514 aa23.24■■□□□ 1.31
EFEMP1-202ENST00000394555 FAM50AQ14320 339 aaKnown RBP23.23■■□□□ 1.31
EFEMP1-202ENST00000394555 WDR97A6NE52 1622 aa23.21■■□□□ 1.31
EFEMP1-202ENST00000394555 PPP1R15AO75807 674 aaPredicted RBP23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms