RNA–Protein interactions for RNA: ENST00000261205.8

SYT1-201, Transcript of synaptotagmin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYT1, Length 4,808 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-201ENST00000261205 NISCHQ9Y2I1 1504 aa29.92■■■□□ 2.38
SYT1-201ENST00000261205 DCAF8L2P0C7V8 631 aa28.61■■■□□ 2.17
SYT1-201ENST00000261205 SUPT5HO00267 1087 aaKnown RBP26.77■■□□□ 1.88
SYT1-201ENST00000261205 SHROOM4Q9ULL8 1493 aa26.76■■□□□ 1.87
SYT1-201ENST00000261205 ABCC9O60706 1549 aa25.53■■□□□ 1.68
SYT1-201ENST00000261205 FAM9AQ8IZU1 332 aaPredicted RBP25.33■■□□□ 1.65
SYT1-201ENST00000261205 CCDC180Q9P1Z9 1646 aa25.26■■□□□ 1.63
SYT1-201ENST00000261205 APLP2Q06481 763 aa25.2■■□□□ 1.62
SYT1-201ENST00000261205 TRIM41Q8WV44 630 aa25.17■■□□□ 1.62
SYT1-201ENST00000261205 EHMT2Q96KQ7 1210 aa25.07■■□□□ 1.6
SYT1-201ENST00000261205 PABPN1Q86U42 306 aaKnown RBP eCLIP24.84■■□□□ 1.57
SYT1-201ENST00000261205 ZCCHC6Q5VYS8 1495 aaKnown RBP24.83■■□□□ 1.57
SYT1-201ENST00000261205 UBTFP17480 764 aaKnown RBP24.64■■□□□ 1.54
SYT1-201ENST00000261205 RB1CC1Q8TDY2 1594 aa24.46■■□□□ 1.51
SYT1-201ENST00000261205 RANGAP1P46060 587 aaPredicted RBP24.41■■□□□ 1.5
SYT1-201ENST00000261205 NACADO15069 1562 aa24.38■■□□□ 1.49
SYT1-201ENST00000261205 SCRIBQ14160 1630 aa24.37■■□□□ 1.49
SYT1-201ENST00000261205 ATP1B4Q9UN42 357 aaPredicted RBP24.34■■□□□ 1.49
SYT1-201ENST00000261205 CHIC1Q5VXU3 224 aa24.31■■□□□ 1.48
SYT1-201ENST00000261205 DCAF1Q9Y4B6 1507 aa24.18■■□□□ 1.46
SYT1-201ENST00000261205 TTBK1Q5TCY1 1321 aaPredicted RBP24.13■■□□□ 1.45
SYT1-201ENST00000261205 PCGF6Q9BYE7 350 aa24.05■■□□□ 1.44
SYT1-201ENST00000261205 ZEB1P37275 1124 aaPredicted RBP23.99■■□□□ 1.43
SYT1-201ENST00000261205 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.83■■□□□ 1.4
SYT1-201ENST00000261205 HNRNPUL2Q1KMD3 747 aaKnown RBP23.83■■□□□ 1.4
SYT1-201ENST00000261205 CCER1Q8TC90 406 aaPredicted RBP23.8■■□□□ 1.4
SYT1-201ENST00000261205 MYO15BQ96JP2 1530 aa23.76■■□□□ 1.39
SYT1-201ENST00000261205 LOC105371045A0A1W2PR82 267 aa23.73■■□□□ 1.39
SYT1-201ENST00000261205 TRIM26Q12899 539 aaPredicted RBP23.71■■□□□ 1.39
SYT1-201ENST00000261205 CSRNP3Q8WYN3 585 aa23.59■■□□□ 1.37
SYT1-201ENST00000261205 RSF1Q96T23 1441 aaPredicted RBP23.57■■□□□ 1.36
SYT1-201ENST00000261205 BAZ1AQ9NRL2 1556 aaPredicted RBP23.54■■□□□ 1.36
SYT1-201ENST00000261205 MYT1LQ9UL68 1186 aa23.5■■□□□ 1.35
SYT1-201ENST00000261205 PPARGC1BQ86YN6 1023 aaKnown RBP23.49■■□□□ 1.35
SYT1-201ENST00000261205 BAZ1BQ9UIG0 1483 aaKnown RBP23.49■■□□□ 1.35
SYT1-201ENST00000261205 FBLN2P98095 1184 aa23.48■■□□□ 1.35
SYT1-201ENST00000261205 PELP1Q8IZL8 1130 aaKnown RBP23.38■■□□□ 1.33
SYT1-201ENST00000261205 ITGAEP38570 1179 aa23.35■■□□□ 1.33
SYT1-201ENST00000261205 CDK11AQ9UQ88 783 aaPredicted RBP23.21■■□□□ 1.31
SYT1-201ENST00000261205 CECR2Q9BXF3 1484 aa23.2■■□□□ 1.3
SYT1-201ENST00000261205 EEA1Q15075 1411 aa23.18■■□□□ 1.3
SYT1-201ENST00000261205 SMARCA2P51531 1590 aa23.16■■□□□ 1.3
SYT1-201ENST00000261205 FAM50AQ14320 339 aaKnown RBP23.16■■□□□ 1.3
SYT1-201ENST00000261205 WRNQ14191 1432 aaPredicted RBP eCLIP23.09■■□□□ 1.29
SYT1-201ENST00000261205 CENPBP07199 599 aaPredicted RBP23.04■■□□□ 1.28
SYT1-201ENST00000261205 P3H3Q8IVL6 736 aa23.02■■□□□ 1.28
SYT1-201ENST00000261205 CHMP7Q8WUX9 453 aaPredicted RBP23.01■■□□□ 1.27
SYT1-201ENST00000261205 MROH2BQ7Z745 1585 aa22.98■■□□□ 1.27
SYT1-201ENST00000261205 NPM1P06748 294 aaKnown RBP eCLIP22.96■■□□□ 1.27
SYT1-201ENST00000261205 ERCC6Q03468 1493 aa22.94■■□□□ 1.26
SYT1-201ENST00000261205 KIF27Q86VH2 1401 aa22.94■■□□□ 1.26
SYT1-201ENST00000261205 TRIM52Q96A61 297 aa22.92■■□□□ 1.26
SYT1-201ENST00000261205 HRCP23327 699 aa22.87■■□□□ 1.25
SYT1-201ENST00000261205 PDS5BQ9NTI5 1447 aa22.86■■□□□ 1.25
SYT1-201ENST00000261205 GOLGA3Q08378 1498 aa22.81■■□□□ 1.24
SYT1-201ENST00000261205 TOP2AP11388 1531 aaKnown RBP22.8■■□□□ 1.24
SYT1-201ENST00000261205 CCDC88BA6NC98 1476 aa22.79■■□□□ 1.24
SYT1-201ENST00000261205 ATAD2BQ9ULI0 1458 aa22.76■■□□□ 1.23
SYT1-201ENST00000261205 CLIP1P30622 1438 aa22.74■■□□□ 1.23
SYT1-201ENST00000261205 ARID3CA6NKF2 412 aa22.73■■□□□ 1.23
SYT1-201ENST00000261205 CEP164Q9UPV0 1460 aa22.72■■□□□ 1.23
SYT1-201ENST00000261205 SMARCA4P51532 1647 aa22.7■■□□□ 1.22
SYT1-201ENST00000261205 ZNF777Q9ULD5 760 aaPredicted RBP22.68■■□□□ 1.22
SYT1-201ENST00000261205 CADPSQ9ULU8 1353 aa22.68■■□□□ 1.22
SYT1-201ENST00000261205 POLR3GLQ9BT43 218 aa22.64■■□□□ 1.22
SYT1-201ENST00000261205 MTUS2Q5JR59 1369 aa22.62■■□□□ 1.21
SYT1-201ENST00000261205 TNIKQ9UKE5 1360 aa22.62■■□□□ 1.21
SYT1-201ENST00000261205 NEFLP07196 543 aa22.61■■□□□ 1.21
SYT1-201ENST00000261205 WIZO95785 1651 aa22.58■■□□□ 1.2
SYT1-201ENST00000261205 CUX2O14529 1486 aa22.56■■□□□ 1.2
SYT1-201ENST00000261205 ACIN1Q9UKV3 1341 aaKnown RBP22.54■■□□□ 1.2
SYT1-201ENST00000261205 NEUROD1Q13562 356 aa22.54■■□□□ 1.2
SYT1-201ENST00000261205 CARMIL1Q5VZK9 1371 aa22.53■■□□□ 1.2
SYT1-201ENST00000261205 PLEKHD1A6NEE1 506 aa22.52■■□□□ 1.2
SYT1-201ENST00000261205 CEP162Q5TB80 1403 aa22.51■■□□□ 1.19
SYT1-201ENST00000261205 ESF1Q9H501 851 aaKnown RBP22.51■■□□□ 1.19
SYT1-201ENST00000261205 TSPY4P0CV99 314 aa22.5■■□□□ 1.19
SYT1-201ENST00000261205 TSPY10P0CW01 314 aa22.5■■□□□ 1.19
SYT1-201ENST00000261205 SOGA1O94964 1423 aa22.47■■□□□ 1.19
SYT1-201ENST00000261205 NCAPD3P42695 1498 aa22.46■■□□□ 1.19
SYT1-201ENST00000261205 ABCC8Q09428 1581 aa22.45■■□□□ 1.18
SYT1-201ENST00000261205 FHAD1B1AJZ9 1412 aa22.4■■□□□ 1.18
SYT1-201ENST00000261205 SLC4A1APQ9BWU0 796 aaKnown RBP22.38■■□□□ 1.17
SYT1-201ENST00000261205 YTHDC1Q96MU7 727 aaKnown RBP22.37■■□□□ 1.17
SYT1-201ENST00000261205 EIF4G1Q04637 1599 aaKnown RBP22.36■■□□□ 1.17
SYT1-201ENST00000261205 ZNF326Q5BKZ1 582 aaKnown RBP22.34■■□□□ 1.17
SYT1-201ENST00000261205 FANCD2Q9BXW9 1451 aa22.29■■□□□ 1.16
SYT1-201ENST00000261205 CARMIL2Q6F5E8 1435 aa22.28■■□□□ 1.16
SYT1-201ENST00000261205 DIEXFQ68CQ4 756 aaKnown RBP22.26■■□□□ 1.15
SYT1-201ENST00000261205 TDRD9Q8NDG6 1382 aaKnown RBP22.25■■□□□ 1.15
SYT1-201ENST00000261205 TONSLQ96HA7 1378 aa22.23■■□□□ 1.15
SYT1-201ENST00000261205 KCNH8Q96L42 1107 aa22.23■■□□□ 1.15
SYT1-201ENST00000261205 BCANQ96GW7 911 aa22.22■■□□□ 1.15
SYT1-201ENST00000261205 CHIC2Q9UKJ5 165 aa22.21■■□□□ 1.15
SYT1-201ENST00000261205 CFDP1Q9UEE9 299 aaPredicted RBP22.21■■□□□ 1.15
SYT1-201ENST00000261205 STAG3Q9UJ98 1225 aa22.2■■□□□ 1.14
SYT1-201ENST00000261205 ANP32CO43423 234 aa22.15■■□□□ 1.14
SYT1-201ENST00000261205 ZNF316A6NFI3 1004 aaPredicted RBP22.15■■□□□ 1.14
SYT1-201ENST00000261205 RAPGEF2Q9Y4G8 1499 aa22.13■■□□□ 1.13
SYT1-201ENST00000261205 CNGB1Q14028 1251 aaPredicted RBP22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms