RNA–Protein interactions for RNA: ENST00000389378.6

TNIP1-202, Transcript of TNFAIP3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TNIP1, Length 2,935 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-202ENST00000389378 NISCHQ9Y2I1 1504 aa32.19■■■□□ 2.74
TNIP1-202ENST00000389378 SHROOM4Q9ULL8 1493 aa28.47■■■□□ 2.15
TNIP1-202ENST00000389378 SUPT5HO00267 1087 aaKnown RBP28.14■■■□□ 2.1
TNIP1-202ENST00000389378 DCAF8L2P0C7V8 631 aa27.4■■□□□ 1.98
TNIP1-202ENST00000389378 MYO15BQ96JP2 1530 aa27.3■■□□□ 1.96
TNIP1-202ENST00000389378 CHIC1Q5VXU3 224 aa27.29■■□□□ 1.96
TNIP1-202ENST00000389378 ZCCHC6Q5VYS8 1495 aaKnown RBP27.25■■□□□ 1.95
TNIP1-202ENST00000389378 HRCP23327 699 aa27.2■■□□□ 1.94
TNIP1-202ENST00000389378 PCGF6Q9BYE7 350 aa27.16■■□□□ 1.94
TNIP1-202ENST00000389378 PPARGC1BQ86YN6 1023 aaKnown RBP26.93■■□□□ 1.9
TNIP1-202ENST00000389378 CCDC180Q9P1Z9 1646 aa26.83■■□□□ 1.89
TNIP1-202ENST00000389378 LOC105371045A0A1W2PR82 267 aa26.78■■□□□ 1.88
TNIP1-202ENST00000389378 DCAF1Q9Y4B6 1507 aa26.34■■□□□ 1.81
TNIP1-202ENST00000389378 TRIM26Q12899 539 aaPredicted RBP26.23■■□□□ 1.79
TNIP1-202ENST00000389378 EHMT2Q96KQ7 1210 aa26.13■■□□□ 1.77
TNIP1-202ENST00000389378 FAM9AQ8IZU1 332 aaPredicted RBP26.1■■□□□ 1.77
TNIP1-202ENST00000389378 TRIM41Q8WV44 630 aa25.97■■□□□ 1.75
TNIP1-202ENST00000389378 RSF1Q96T23 1441 aaPredicted RBP25.79■■□□□ 1.72
TNIP1-202ENST00000389378 ABCC9O60706 1549 aa25.77■■□□□ 1.72
TNIP1-202ENST00000389378 SCRIBQ14160 1630 aa25.75■■□□□ 1.71
TNIP1-202ENST00000389378 ZEB1P37275 1124 aaPredicted RBP25.7■■□□□ 1.7
TNIP1-202ENST00000389378 RB1CC1Q8TDY2 1594 aa25.61■■□□□ 1.69
TNIP1-202ENST00000389378 SCAF1Q9H7N4 1312 aaKnown RBP25.49■■□□□ 1.67
TNIP1-202ENST00000389378 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.4■■□□□ 1.66
TNIP1-202ENST00000389378 CECR2Q9BXF3 1484 aa25.35■■□□□ 1.65
TNIP1-202ENST00000389378 TTBK1Q5TCY1 1321 aaPredicted RBP25.34■■□□□ 1.65
TNIP1-202ENST00000389378 CCER1Q8TC90 406 aaPredicted RBP25.27■■□□□ 1.64
TNIP1-202ENST00000389378 MROH2BQ7Z745 1585 aa25.21■■□□□ 1.63
TNIP1-202ENST00000389378 PELP1Q8IZL8 1130 aaKnown RBP25.13■■□□□ 1.61
TNIP1-202ENST00000389378 WIZO95785 1651 aa25.1■■□□□ 1.61
TNIP1-202ENST00000389378 NEUROD1Q13562 356 aa25.05■■□□□ 1.6
TNIP1-202ENST00000389378 ACIN1Q9UKV3 1341 aaKnown RBP24.99■■□□□ 1.59
TNIP1-202ENST00000389378 DIEXFQ68CQ4 756 aaKnown RBP24.96■■□□□ 1.59
TNIP1-202ENST00000389378 GTF3C3Q9Y5Q9 886 aa24.86■■□□□ 1.57
TNIP1-202ENST00000389378 NACADO15069 1562 aa24.84■■□□□ 1.57
TNIP1-202ENST00000389378 ABCC8Q09428 1581 aa24.83■■□□□ 1.57
TNIP1-202ENST00000389378 CCDC88BA6NC98 1476 aa24.8■■□□□ 1.56
TNIP1-202ENST00000389378 UBTFP17480 764 aaKnown RBP24.77■■□□□ 1.56
TNIP1-202ENST00000389378 CENPBP07199 599 aaPredicted RBP24.74■■□□□ 1.55
TNIP1-202ENST00000389378 BAZ1AQ9NRL2 1556 aaPredicted RBP24.74■■□□□ 1.55
TNIP1-202ENST00000389378 SOGA1O94964 1423 aa24.72■■□□□ 1.55
TNIP1-202ENST00000389378 CEP162Q5TB80 1403 aa24.72■■□□□ 1.55
TNIP1-202ENST00000389378 YTHDC1Q96MU7 727 aaKnown RBP24.69■■□□□ 1.54
TNIP1-202ENST00000389378 EIF4G1Q04637 1599 aaKnown RBP24.66■■□□□ 1.54
TNIP1-202ENST00000389378 RUSC2Q8N2Y8 1516 aa24.61■■□□□ 1.53
TNIP1-202ENST00000389378 CSRNP3Q8WYN3 585 aa24.6■■□□□ 1.53
TNIP1-202ENST00000389378 HNRNPUL2Q1KMD3 747 aaKnown RBP24.58■■□□□ 1.53
TNIP1-202ENST00000389378 WRNQ14191 1432 aaPredicted RBP eCLIP24.57■■□□□ 1.52
TNIP1-202ENST00000389378 ZNF316A6NFI3 1004 aaPredicted RBP24.56■■□□□ 1.52
TNIP1-202ENST00000389378 TNIKQ9UKE5 1360 aa24.53■■□□□ 1.52
TNIP1-202ENST00000389378 RANGAP1P46060 587 aaPredicted RBP24.51■■□□□ 1.51
TNIP1-202ENST00000389378 TOP2AP11388 1531 aaKnown RBP24.5■■□□□ 1.51
TNIP1-202ENST00000389378 SMARCA2P51531 1590 aa24.45■■□□□ 1.51
TNIP1-202ENST00000389378 MIER1Q8N108 512 aa24.42■■□□□ 1.5
TNIP1-202ENST00000389378 SMARCA4P51532 1647 aa24.4■■□□□ 1.5
TNIP1-202ENST00000389378 PABPN1Q86U42 306 aaKnown RBP eCLIP24.38■■□□□ 1.49
TNIP1-202ENST00000389378 GOLGA3Q08378 1498 aa24.3■■□□□ 1.48
TNIP1-202ENST00000389378 EEA1Q15075 1411 aa24.27■■□□□ 1.48
TNIP1-202ENST00000389378 APLP2Q06481 763 aa24.22■■□□□ 1.47
TNIP1-202ENST00000389378 CLIP1P30622 1438 aa24.18■■□□□ 1.46
TNIP1-202ENST00000389378 UNC13AQ9UPW8 1703 aa24.1■■□□□ 1.45
TNIP1-202ENST00000389378 CEP164Q9UPV0 1460 aa24.09■■□□□ 1.45
TNIP1-202ENST00000389378 SYNJ1O43426 1573 aa24.06■■□□□ 1.44
TNIP1-202ENST00000389378 RAPGEF2Q9Y4G8 1499 aa24.03■■□□□ 1.44
TNIP1-202ENST00000389378 VPS8Q8N3P4 1428 aa24.02■■□□□ 1.44
TNIP1-202ENST00000389378 KIF21BO75037 1637 aa23.91■■□□□ 1.42
TNIP1-202ENST00000389378 KANK4Q5T7N3 995 aaPredicted RBP23.88■■□□□ 1.41
TNIP1-202ENST00000389378 ITGAEP38570 1179 aa23.87■■□□□ 1.41
TNIP1-202ENST00000389378 MYT1Q01538 1121 aa23.86■■□□□ 1.41
TNIP1-202ENST00000389378 BICRAQ9NZM4 1560 aa23.82■■□□□ 1.4
TNIP1-202ENST00000389378 DHX57Q6P158 1386 aaKnown RBP23.82■■□□□ 1.4
TNIP1-202ENST00000389378 BAZ1BQ9UIG0 1483 aaKnown RBP23.78■■□□□ 1.4
TNIP1-202ENST00000389378 ATAD2BQ9ULI0 1458 aa23.75■■□□□ 1.39
TNIP1-202ENST00000389378 SUPT16HQ9Y5B9 1047 aaKnown RBP23.73■■□□□ 1.39
TNIP1-202ENST00000389378 PEG3Q9GZU2 1588 aa23.68■■□□□ 1.38
TNIP1-202ENST00000389378 KCNH8Q96L42 1107 aa23.67■■□□□ 1.38
TNIP1-202ENST00000389378 ARAP1Q96P48 1450 aa23.64■■□□□ 1.38
TNIP1-202ENST00000389378 CLSPNQ9HAW4 1339 aa23.63■■□□□ 1.37
TNIP1-202ENST00000389378 TOP2BQ02880 1626 aa23.57■■□□□ 1.36
TNIP1-202ENST00000389378 BCANQ96GW7 911 aa23.55■■□□□ 1.36
TNIP1-202ENST00000389378 PRXQ9BXM0 1461 aa23.54■■□□□ 1.36
TNIP1-202ENST00000389378 CCNB3Q8WWL7 1395 aa23.5■■□□□ 1.35
TNIP1-202ENST00000389378 TSHZ2Q9NRE2 1034 aa23.47■■□□□ 1.35
TNIP1-202ENST00000389378 RRBP1Q9P2E9 1410 aaKnown RBP23.46■■□□□ 1.35
TNIP1-202ENST00000389378 DDX10Q13206 875 aaKnown RBP23.44■■□□□ 1.34
TNIP1-202ENST00000389378 HIRIP3Q9BW71 556 aaPredicted RBP23.44■■□□□ 1.34
TNIP1-202ENST00000389378 ERICH3Q5RHP9 1530 aa23.44■■□□□ 1.34
TNIP1-202ENST00000389378 SIN3AQ96ST3 1273 aa23.43■■□□□ 1.34
TNIP1-202ENST00000389378 RAB3GAP2Q9H2M9 1393 aa23.42■■□□□ 1.34
TNIP1-202ENST00000389378 ATP1B4Q9UN42 357 aaPredicted RBP23.42■■□□□ 1.34
TNIP1-202ENST00000389378 KIF27Q86VH2 1401 aa23.4■■□□□ 1.34
TNIP1-202ENST00000389378 FAM50AQ14320 339 aaKnown RBP23.39■■□□□ 1.33
TNIP1-202ENST00000389378 ARHGAP35Q9NRY4 1499 aa23.38■■□□□ 1.33
TNIP1-202ENST00000389378 CUX1P39880 1505 aa23.38■■□□□ 1.33
TNIP1-202ENST00000389378 BIVM-ERCC5R4GMW8 1640 aa23.38■■□□□ 1.33
TNIP1-202ENST00000389378 P3H3Q8IVL6 736 aa23.37■■□□□ 1.33
TNIP1-202ENST00000389378 FKBP8Q14318 412 aa23.34■■□□□ 1.33
TNIP1-202ENST00000389378 CUX2O14529 1486 aa23.27■■□□□ 1.32
TNIP1-202ENST00000389378 MAPKBP1O60336 1514 aa23.27■■□□□ 1.32
TNIP1-202ENST00000389378 TRIM52Q96A61 297 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms