RNA–Protein interactions for RNA: ENST00000531327.5

SLC1A4-205, Transcript of solute carrier family 1 member 4, humanhuman

TSL 2 BASIC

Gene SLC1A4, Length 1,217 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-205ENST00000531327 NISCHQ9Y2I1 1504 aa37.41■■■■□ 3.58
SLC1A4-205ENST00000531327 CCDC180Q9P1Z9 1646 aa33.06■■■□□ 2.88
SLC1A4-205ENST00000531327 ABCC9O60706 1549 aa31.83■■■□□ 2.69
SLC1A4-205ENST00000531327 ZCCHC6Q5VYS8 1495 aaKnown RBP31.31■■■□□ 2.6
SLC1A4-205ENST00000531327 DCAF8L2P0C7V8 631 aa31.01■■■□□ 2.55
SLC1A4-205ENST00000531327 DCAF1Q9Y4B6 1507 aa30.95■■■□□ 2.55
SLC1A4-205ENST00000531327 NACADO15069 1562 aa30.91■■■□□ 2.54
SLC1A4-205ENST00000531327 MYO15BQ96JP2 1530 aa30.86■■■□□ 2.53
SLC1A4-205ENST00000531327 RB1CC1Q8TDY2 1594 aa30.84■■■□□ 2.53
SLC1A4-205ENST00000531327 SCRIBQ14160 1630 aa30.26■■■□□ 2.44
SLC1A4-205ENST00000531327 UNC13AQ9UPW8 1703 aa30.18■■■□□ 2.42
SLC1A4-205ENST00000531327 SHROOM4Q9ULL8 1493 aa29.94■■■□□ 2.38
SLC1A4-205ENST00000531327 BICRAQ9NZM4 1560 aa29.88■■■□□ 2.37
SLC1A4-205ENST00000531327 PABPN1Q86U42 306 aaKnown RBP eCLIP29.79■■■□□ 2.36
SLC1A4-205ENST00000531327 CECR2Q9BXF3 1484 aa29.08■■■□□ 2.25
SLC1A4-205ENST00000531327 EIF4G1Q04637 1599 aaKnown RBP29.07■■■□□ 2.24
SLC1A4-205ENST00000531327 BAZ1AQ9NRL2 1556 aaPredicted RBP28.98■■■□□ 2.23
SLC1A4-205ENST00000531327 SMARCA4P51532 1647 aa28.95■■■□□ 2.23
SLC1A4-205ENST00000531327 MROH2BQ7Z745 1585 aa28.86■■■□□ 2.21
SLC1A4-205ENST00000531327 CC2D2AQ9P2K1 1620 aa28.81■■■□□ 2.2
SLC1A4-205ENST00000531327 RSF1Q96T23 1441 aaPredicted RBP28.69■■■□□ 2.18
SLC1A4-205ENST00000531327 SMARCA2P51531 1590 aa28.62■■■□□ 2.17
SLC1A4-205ENST00000531327 PEG3Q9GZU2 1588 aa28.62■■■□□ 2.17
SLC1A4-205ENST00000531327 ATAD2BQ9ULI0 1458 aa28.6■■■□□ 2.17
SLC1A4-205ENST00000531327 DNAJC5BQ9UF47 199 aa28.6■■■□□ 2.17
SLC1A4-205ENST00000531327 WIZO95785 1651 aa28.6■■■□□ 2.17
SLC1A4-205ENST00000531327 NCAPD3P42695 1498 aa28.47■■■□□ 2.15
SLC1A4-205ENST00000531327 HMGXB3Q12766 1538 aa28.45■■■□□ 2.15
SLC1A4-205ENST00000531327 BAZ1BQ9UIG0 1483 aaKnown RBP28.45■■■□□ 2.14
SLC1A4-205ENST00000531327 SUPT5HO00267 1087 aaKnown RBP28.39■■■□□ 2.14
SLC1A4-205ENST00000531327 TOP2AP11388 1531 aaKnown RBP28.33■■■□□ 2.13
SLC1A4-205ENST00000531327 CCDC88BA6NC98 1476 aa27.95■■■□□ 2.06
SLC1A4-205ENST00000531327 LAMC3Q9Y6N6 1575 aa27.7■■■□□ 2.03
SLC1A4-205ENST00000531327 NESP48681 1621 aa27.7■■■□□ 2.02
SLC1A4-205ENST00000531327 CADPSQ9ULU8 1353 aa27.68■■■□□ 2.02
SLC1A4-205ENST00000531327 CFTRP13569 1480 aa27.64■■■□□ 2.02
SLC1A4-205ENST00000531327 PRDM2Q13029 1718 aa27.57■■■□□ 2
SLC1A4-205ENST00000531327 PDS5BQ9NTI5 1447 aa27.46■■□□□ 1.99
SLC1A4-205ENST00000531327 KIF21AQ7Z4S6 1674 aa27.43■■□□□ 1.98
SLC1A4-205ENST00000531327 FANCD2Q9BXW9 1451 aa27.42■■□□□ 1.98
SLC1A4-205ENST00000531327 ERCC6Q03468 1493 aa27.41■■□□□ 1.98
SLC1A4-205ENST00000531327 CEP164Q9UPV0 1460 aa27.36■■□□□ 1.97
SLC1A4-205ENST00000531327 MRC2Q9UBG0 1479 aa27.19■■□□□ 1.94
SLC1A4-205ENST00000531327 THOC2Q8NI27 1593 aaKnown RBP27.19■■□□□ 1.94
SLC1A4-205ENST00000531327 ABCC8Q09428 1581 aa27.16■■□□□ 1.94
SLC1A4-205ENST00000531327 URB2Q14146 1524 aaKnown RBP27.11■■□□□ 1.93
SLC1A4-205ENST00000531327 WDR62O43379 1518 aa27.08■■□□□ 1.93
SLC1A4-205ENST00000531327 DNMBPQ6XZF7 1577 aa27.08■■□□□ 1.93
SLC1A4-205ENST00000531327 WRNQ14191 1432 aaPredicted RBP eCLIP27.07■■□□□ 1.92
SLC1A4-205ENST00000531327 CUX1P39880 1505 aa27.06■■□□□ 1.92
SLC1A4-205ENST00000531327 TOPBP1Q92547 1522 aa27.04■■□□□ 1.92
SLC1A4-205ENST00000531327 SYNJ1O43426 1573 aa27.01■■□□□ 1.92
SLC1A4-205ENST00000531327 BIVM-ERCC5R4GMW8 1640 aa26.98■■□□□ 1.91
SLC1A4-205ENST00000531327 TOP2BQ02880 1626 aa26.97■■□□□ 1.91
SLC1A4-205ENST00000531327 FGD5Q6ZNL6 1462 aa26.88■■□□□ 1.89
SLC1A4-205ENST00000531327 CUX2O14529 1486 aa26.87■■□□□ 1.89
SLC1A4-205ENST00000531327 POLA1P09884 1462 aaPredicted RBP26.86■■□□□ 1.89
SLC1A4-205ENST00000531327 CHIC1Q5VXU3 224 aa26.76■■□□□ 1.87
SLC1A4-205ENST00000531327 TRIM41Q8WV44 630 aa26.76■■□□□ 1.87
SLC1A4-205ENST00000531327 IFT140Q96RY7 1462 aa26.73■■□□□ 1.87
SLC1A4-205ENST00000531327 RAD54L2Q9Y4B4 1467 aa26.73■■□□□ 1.87
SLC1A4-205ENST00000531327 TARBP1Q13395 1621 aaKnown RBP26.71■■□□□ 1.87
SLC1A4-205ENST00000531327 SOGA1O94964 1423 aa26.71■■□□□ 1.87
SLC1A4-205ENST00000531327 WDR97A6NE52 1622 aa26.67■■□□□ 1.86
SLC1A4-205ENST00000531327 ABCA10Q8WWZ4 1543 aa26.61■■□□□ 1.85
SLC1A4-205ENST00000531327 ZNF608Q9ULD9 1512 aaPredicted RBP26.57■■□□□ 1.84
SLC1A4-205ENST00000531327 EIF4G3O43432 1585 aaKnown RBP26.55■■□□□ 1.84
SLC1A4-205ENST00000531327 ABCA5Q8WWZ7 1642 aa26.51■■□□□ 1.83
SLC1A4-205ENST00000531327 TDRD9Q8NDG6 1382 aaKnown RBP26.51■■□□□ 1.83
SLC1A4-205ENST00000531327 AQRO60306 1485 aaKnown RBP eCLIP26.47■■□□□ 1.83
SLC1A4-205ENST00000531327 KIF27Q86VH2 1401 aa26.45■■□□□ 1.82
SLC1A4-205ENST00000531327 GAPVD1Q14C86 1478 aa26.44■■□□□ 1.82
SLC1A4-205ENST00000531327 PBRM1Q86U86 1689 aa26.43■■□□□ 1.82
SLC1A4-205ENST00000531327 RUSC2Q8N2Y8 1516 aa26.38■■□□□ 1.81
SLC1A4-205ENST00000531327 GRIN2BQ13224 1484 aa26.36■■□□□ 1.81
SLC1A4-205ENST00000531327 ERICH3Q5RHP9 1530 aa26.32■■□□□ 1.8
SLC1A4-205ENST00000531327 EEA1Q15075 1411 aa26.3■■□□□ 1.8
SLC1A4-205ENST00000531327 SNAPC4Q5SXM2 1469 aa26.3■■□□□ 1.8
SLC1A4-205ENST00000531327 MAGI1Q96QZ7 1491 aaPredicted RBP26.24■■□□□ 1.79
SLC1A4-205ENST00000531327 FAM9AQ8IZU1 332 aaPredicted RBP26.24■■□□□ 1.79
SLC1A4-205ENST00000531327 ADAMTS12P58397 1594 aa26.24■■□□□ 1.79
SLC1A4-205ENST00000531327 CUL7Q14999 1698 aa26.23■■□□□ 1.79
SLC1A4-205ENST00000531327 IGF1RP08069 1367 aa26.21■■□□□ 1.79
SLC1A4-205ENST00000531327 FHAD1B1AJZ9 1412 aa26.14■■□□□ 1.78
SLC1A4-205ENST00000531327 SYNJ2O15056 1496 aa26.13■■□□□ 1.77
SLC1A4-205ENST00000531327 CSRNP3Q8WYN3 585 aa26.12■■□□□ 1.77
SLC1A4-205ENST00000531327 CHD1O14646 1710 aa26.11■■□□□ 1.77
SLC1A4-205ENST00000531327 CARMIL1Q5VZK9 1371 aa26.09■■□□□ 1.77
SLC1A4-205ENST00000531327 PRXQ9BXM0 1461 aa26.06■■□□□ 1.76
SLC1A4-205ENST00000531327 FBLN2P98095 1184 aa26.05■■□□□ 1.76
SLC1A4-205ENST00000531327 GRIN2AQ12879 1464 aa26.04■■□□□ 1.76
SLC1A4-205ENST00000531327 RAPGEF2Q9Y4G8 1499 aa26.04■■□□□ 1.76
SLC1A4-205ENST00000531327 KIF21BO75037 1637 aa26.03■■□□□ 1.76
SLC1A4-205ENST00000531327 CHMP7Q8WUX9 453 aaPredicted RBP26.03■■□□□ 1.76
SLC1A4-205ENST00000531327 GOLGA3Q08378 1498 aa25.92■■□□□ 1.74
SLC1A4-205ENST00000531327 CEP170Q5SW79 1584 aa25.91■■□□□ 1.74
SLC1A4-205ENST00000531327 EHMT2Q96KQ7 1210 aa25.9■■□□□ 1.74
SLC1A4-205ENST00000531327 NUP160Q12769 1436 aa25.88■■□□□ 1.73
SLC1A4-205ENST00000531327 CTTNBP2Q8WZ74 1663 aa25.83■■□□□ 1.73
SLC1A4-205ENST00000531327 CLASP1Q7Z460 1538 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms