RNA–Protein interactions for RNA: ENST00000619876.4

RDM1-227, Transcript of RAD52 motif containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RDM1, Length 1,491 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDM1-227ENST00000619876 NISCHQ9Y2I1 1504 aa39.06■■■■□ 3.84
RDM1-227ENST00000619876 CCDC180Q9P1Z9 1646 aa34.82■■■■□ 3.16
RDM1-227ENST00000619876 ABCC9O60706 1549 aa34.36■■■■□ 3.09
RDM1-227ENST00000619876 RB1CC1Q8TDY2 1594 aa32.97■■■□□ 2.87
RDM1-227ENST00000619876 NACADO15069 1562 aa32.86■■■□□ 2.85
RDM1-227ENST00000619876 DCAF8L2P0C7V8 631 aa32.82■■■□□ 2.84
RDM1-227ENST00000619876 MYO15BQ96JP2 1530 aa32.62■■■□□ 2.81
RDM1-227ENST00000619876 ZCCHC6Q5VYS8 1495 aaKnown RBP32.47■■■□□ 2.79
RDM1-227ENST00000619876 DCAF1Q9Y4B6 1507 aa32.35■■■□□ 2.77
RDM1-227ENST00000619876 PABPN1Q86U42 306 aaKnown RBP eCLIP32.07■■■□□ 2.72
RDM1-227ENST00000619876 UNC13AQ9UPW8 1703 aa32.02■■■□□ 2.72
RDM1-227ENST00000619876 BICRAQ9NZM4 1560 aa31.87■■■□□ 2.69
RDM1-227ENST00000619876 DNAJC5BQ9UF47 199 aa31.76■■■□□ 2.67
RDM1-227ENST00000619876 SCRIBQ14160 1630 aa31.71■■■□□ 2.67
RDM1-227ENST00000619876 SHROOM4Q9ULL8 1493 aa31.69■■■□□ 2.66
RDM1-227ENST00000619876 EIF4G1Q04637 1599 aaKnown RBP31.12■■■□□ 2.57
RDM1-227ENST00000619876 CC2D2AQ9P2K1 1620 aa31.04■■■□□ 2.56
RDM1-227ENST00000619876 CECR2Q9BXF3 1484 aa30.94■■■□□ 2.54
RDM1-227ENST00000619876 NCAPD3P42695 1498 aa30.34■■■□□ 2.45
RDM1-227ENST00000619876 SMARCA4P51532 1647 aa30.33■■■□□ 2.45
RDM1-227ENST00000619876 BAZ1AQ9NRL2 1556 aaPredicted RBP30.33■■■□□ 2.45
RDM1-227ENST00000619876 ATAD2BQ9ULI0 1458 aa30.28■■■□□ 2.44
RDM1-227ENST00000619876 SMARCA2P51531 1590 aa30.26■■■□□ 2.44
RDM1-227ENST00000619876 HMGXB3Q12766 1538 aa30.14■■■□□ 2.42
RDM1-227ENST00000619876 PEG3Q9GZU2 1588 aa30.08■■■□□ 2.41
RDM1-227ENST00000619876 MROH2BQ7Z745 1585 aa30.05■■■□□ 2.4
RDM1-227ENST00000619876 BAZ1BQ9UIG0 1483 aaKnown RBP30.04■■■□□ 2.4
RDM1-227ENST00000619876 ERCC6Q03468 1493 aa29.71■■■□□ 2.35
RDM1-227ENST00000619876 WIZO95785 1651 aa29.67■■■□□ 2.34
RDM1-227ENST00000619876 RSF1Q96T23 1441 aaPredicted RBP29.66■■■□□ 2.34
RDM1-227ENST00000619876 NESP48681 1621 aa29.6■■■□□ 2.33
RDM1-227ENST00000619876 LAMC3Q9Y6N6 1575 aa29.56■■■□□ 2.32
RDM1-227ENST00000619876 CUX2O14529 1486 aa29.49■■■□□ 2.31
RDM1-227ENST00000619876 CADPSQ9ULU8 1353 aa29.46■■■□□ 2.31
RDM1-227ENST00000619876 PDS5BQ9NTI5 1447 aa29.44■■■□□ 2.3
RDM1-227ENST00000619876 TOP2AP11388 1531 aaKnown RBP29.42■■■□□ 2.3
RDM1-227ENST00000619876 THOC2Q8NI27 1593 aaKnown RBP29.21■■■□□ 2.27
RDM1-227ENST00000619876 KIF21AQ7Z4S6 1674 aa29.2■■■□□ 2.27
RDM1-227ENST00000619876 CFTRP13569 1480 aa29.2■■■□□ 2.27
RDM1-227ENST00000619876 MRC2Q9UBG0 1479 aa29.1■■■□□ 2.25
RDM1-227ENST00000619876 CEP164Q9UPV0 1460 aa29.09■■■□□ 2.25
RDM1-227ENST00000619876 FANCD2Q9BXW9 1451 aa29.08■■■□□ 2.25
RDM1-227ENST00000619876 CCDC88BA6NC98 1476 aa29.07■■■□□ 2.24
RDM1-227ENST00000619876 WDR62O43379 1518 aa28.98■■■□□ 2.23
RDM1-227ENST00000619876 DNAJC5Q9H3Z4 198 aa28.92■■■□□ 2.22
RDM1-227ENST00000619876 PRDM2Q13029 1718 aa28.81■■■□□ 2.2
RDM1-227ENST00000619876 URB2Q14146 1524 aaKnown RBP28.76■■■□□ 2.2
RDM1-227ENST00000619876 SUPT5HO00267 1087 aaKnown RBP28.73■■■□□ 2.19
RDM1-227ENST00000619876 ABCC8Q09428 1581 aa28.64■■■□□ 2.18
RDM1-227ENST00000619876 TOPBP1Q92547 1522 aa28.57■■■□□ 2.16
RDM1-227ENST00000619876 DNMBPQ6XZF7 1577 aa28.52■■■□□ 2.16
RDM1-227ENST00000619876 IFT140Q96RY7 1462 aa28.51■■■□□ 2.16
RDM1-227ENST00000619876 AEBP2Q6ZN18 517 aaPredicted RBP28.46■■■□□ 2.15
RDM1-227ENST00000619876 ZNF608Q9ULD9 1512 aaPredicted RBP28.32■■■□□ 2.12
RDM1-227ENST00000619876 POLA1P09884 1462 aaPredicted RBP28.31■■■□□ 2.12
RDM1-227ENST00000619876 OSCARQ8IYS5 282 aa28.27■■■□□ 2.12
RDM1-227ENST00000619876 TARBP1Q13395 1621 aaKnown RBP28.23■■■□□ 2.11
RDM1-227ENST00000619876 SOGA1O94964 1423 aa28.23■■■□□ 2.11
RDM1-227ENST00000619876 CUX1P39880 1505 aa28.21■■■□□ 2.11
RDM1-227ENST00000619876 FGD5Q6ZNL6 1462 aa28.2■■■□□ 2.1
RDM1-227ENST00000619876 EIF4G3O43432 1585 aaKnown RBP28.19■■■□□ 2.1
RDM1-227ENST00000619876 AQRO60306 1485 aaKnown RBP eCLIP28.17■■■□□ 2.11e-6■■■■□ 21.5
RDM1-227ENST00000619876 RAD54L2Q9Y4B4 1467 aa28.16■■■□□ 2.1
RDM1-227ENST00000619876 TDRD9Q8NDG6 1382 aaKnown RBP28.09■■■□□ 2.09
RDM1-227ENST00000619876 WDR97A6NE52 1622 aa28.09■■■□□ 2.09
RDM1-227ENST00000619876 WRNQ14191 1432 aaPredicted RBP eCLIP28.01■■■□□ 2.07
RDM1-227ENST00000619876 FBLN2P98095 1184 aa27.96■■■□□ 2.07
RDM1-227ENST00000619876 GRIN2BQ13224 1484 aa27.95■■■□□ 2.06
RDM1-227ENST00000619876 ABCA10Q8WWZ4 1543 aa27.94■■■□□ 2.06
RDM1-227ENST00000619876 TOP2BQ02880 1626 aa27.92■■■□□ 2.06
RDM1-227ENST00000619876 MAGI1Q96QZ7 1491 aaPredicted RBP27.9■■■□□ 2.06
RDM1-227ENST00000619876 SNAPC4Q5SXM2 1469 aa27.89■■■□□ 2.06
RDM1-227ENST00000619876 BIVM-ERCC5R4GMW8 1640 aa27.89■■■□□ 2.06
RDM1-227ENST00000619876 GAPVD1Q14C86 1478 aa27.89■■■□□ 2.05
RDM1-227ENST00000619876 CHMP7Q8WUX9 453 aaPredicted RBP27.87■■■□□ 2.05
RDM1-227ENST00000619876 SYNJ1O43426 1573 aa27.85■■■□□ 2.05
RDM1-227ENST00000619876 TRIM41Q8WV44 630 aa27.83■■■□□ 2.05
RDM1-227ENST00000619876 CHD1O14646 1710 aa27.83■■■□□ 2.05
RDM1-227ENST00000619876 SYNJ2O15056 1496 aa27.79■■■□□ 2.04
RDM1-227ENST00000619876 ABCA5Q8WWZ7 1642 aa27.78■■■□□ 2.04
RDM1-227ENST00000619876 PBRM1Q86U86 1689 aa27.73■■■□□ 2.03
RDM1-227ENST00000619876 ARHGEF11O15085 1522 aa27.72■■■□□ 2.03
RDM1-227ENST00000619876 RIMBP3CA6NJZ7 1639 aa27.69■■■□□ 2.02
RDM1-227ENST00000619876 RIMBP3BA6NNM3 1639 aa27.69■■■□□ 2.02
RDM1-227ENST00000619876 RIMBP3Q9UFD9 1639 aa27.69■■■□□ 2.02
RDM1-227ENST00000619876 ERICH3Q5RHP9 1530 aa27.61■■■□□ 2.01
RDM1-227ENST00000619876 CLASP1Q7Z460 1538 aa27.59■■■□□ 2.01
RDM1-227ENST00000619876 FHAD1B1AJZ9 1412 aa27.58■■■□□ 2.01
RDM1-227ENST00000619876 GRIN2AQ12879 1464 aa27.56■■■□□ 2
RDM1-227ENST00000619876 ADAMTS12P58397 1594 aa27.55■■■□□ 2
RDM1-227ENST00000619876 CYB5RLQ6IPT4 315 aa27.52■■■□□ 2
RDM1-227ENST00000619876 KIF27Q86VH2 1401 aa27.48■■□□□ 1.99
RDM1-227ENST00000619876 ARAP1Q96P48 1450 aa27.45■■□□□ 1.99
RDM1-227ENST00000619876 NUP160Q12769 1436 aa27.45■■□□□ 1.98
RDM1-227ENST00000619876 IGF1RP08069 1367 aa27.36■■□□□ 1.97
RDM1-227ENST00000619876 CEP170Q5SW79 1584 aa27.36■■□□□ 1.97
RDM1-227ENST00000619876 CUL7Q14999 1698 aa27.27■■□□□ 1.96
RDM1-227ENST00000619876 CARMIL1Q5VZK9 1371 aa27.21■■□□□ 1.95
RDM1-227ENST00000619876 JPH4Q96JJ6 628 aa27.21■■□□□ 1.95
RDM1-227ENST00000619876 SHROOM2Q13796 1616 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms