RNA–Protein interactions for RNA: ENST00000621736.4

NR2E3-204, Transcript of nuclear receptor subfamily 2 group E member 3, humanhuman

TSL 2 BASIC

Gene NR2E3, Length 2,032 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR2E3-204ENST00000621736 NISCHQ9Y2I1 1504 aa38.58■■■■□ 3.77
NR2E3-204ENST00000621736 CCDC180Q9P1Z9 1646 aa34.28■■■■□ 3.08
NR2E3-204ENST00000621736 ABCC9O60706 1549 aa33.49■■■□□ 2.95
NR2E3-204ENST00000621736 RB1CC1Q8TDY2 1594 aa32.23■■■□□ 2.75
NR2E3-204ENST00000621736 NACADO15069 1562 aa32.2■■■□□ 2.75
NR2E3-204ENST00000621736 DCAF8L2P0C7V8 631 aa32.17■■■□□ 2.74
NR2E3-204ENST00000621736 ZCCHC6Q5VYS8 1495 aaKnown RBP32.15■■■□□ 2.74
NR2E3-204ENST00000621736 MYO15BQ96JP2 1530 aa32.03■■■□□ 2.72
NR2E3-204ENST00000621736 DCAF1Q9Y4B6 1507 aa31.92■■■□□ 2.7
NR2E3-204ENST00000621736 UNC13AQ9UPW8 1703 aa31.57■■■□□ 2.64
NR2E3-204ENST00000621736 PABPN1Q86U42 306 aaKnown RBP eCLIP31.3■■■□□ 2.6
NR2E3-204ENST00000621736 BICRAQ9NZM4 1560 aa31.3■■■□□ 2.6
NR2E3-204ENST00000621736 SCRIBQ14160 1630 aa31.29■■■□□ 2.6
NR2E3-204ENST00000621736 SHROOM4Q9ULL8 1493 aa30.91■■■□□ 2.54
NR2E3-204ENST00000621736 DNAJC5BQ9UF47 199 aa30.72■■■□□ 2.51
NR2E3-204ENST00000621736 EIF4G1Q04637 1599 aaKnown RBP30.44■■■□□ 2.46
NR2E3-204ENST00000621736 CC2D2AQ9P2K1 1620 aa30.31■■■□□ 2.44
NR2E3-204ENST00000621736 CECR2Q9BXF3 1484 aa30.08■■■□□ 2.41
NR2E3-204ENST00000621736 SMARCA4P51532 1647 aa29.94■■■□□ 2.38
NR2E3-204ENST00000621736 BAZ1AQ9NRL2 1556 aaPredicted RBP29.89■■■□□ 2.38
NR2E3-204ENST00000621736 ATAD2BQ9ULI0 1458 aa29.75■■■□□ 2.35
NR2E3-204ENST00000621736 MROH2BQ7Z745 1585 aa29.75■■■□□ 2.35
NR2E3-204ENST00000621736 NCAPD3P42695 1498 aa29.72■■■□□ 2.35
NR2E3-204ENST00000621736 SMARCA2P51531 1590 aa29.7■■■□□ 2.35
NR2E3-204ENST00000621736 PEG3Q9GZU2 1588 aa29.64■■■□□ 2.34
NR2E3-204ENST00000621736 HMGXB3Q12766 1538 aa29.58■■■□□ 2.33
NR2E3-204ENST00000621736 BAZ1BQ9UIG0 1483 aaKnown RBP29.49■■■□□ 2.31
NR2E3-204ENST00000621736 WIZO95785 1651 aa29.44■■■□□ 2.3
NR2E3-204ENST00000621736 RSF1Q96T23 1441 aaPredicted RBP29.41■■■□□ 2.3
NR2E3-204ENST00000621736 TOP2AP11388 1531 aaKnown RBP29.11■■■□□ 2.25
NR2E3-204ENST00000621736 NESP48681 1621 aa29.01■■■□□ 2.24
NR2E3-204ENST00000621736 LAMC3Q9Y6N6 1575 aa28.93■■■□□ 2.22
NR2E3-204ENST00000621736 CADPSQ9ULU8 1353 aa28.85■■■□□ 2.21
NR2E3-204ENST00000621736 ERCC6Q03468 1493 aa28.83■■■□□ 2.21
NR2E3-204ENST00000621736 CCDC88BA6NC98 1476 aa28.77■■■□□ 2.2
NR2E3-204ENST00000621736 PDS5BQ9NTI5 1447 aa28.71■■■□□ 2.19
NR2E3-204ENST00000621736 CFTRP13569 1480 aa28.7■■■□□ 2.18
NR2E3-204ENST00000621736 KIF21AQ7Z4S6 1674 aa28.69■■■□□ 2.18
NR2E3-204ENST00000621736 SUPT5HO00267 1087 aaKnown RBP28.68■■■□□ 2.18
NR2E3-204ENST00000621736 THOC2Q8NI27 1593 aaKnown RBP28.57■■■□□ 2.16
NR2E3-204ENST00000621736 CUX2O14529 1486 aa28.52■■■□□ 2.16
NR2E3-204ENST00000621736 FANCD2Q9BXW9 1451 aa28.52■■■□□ 2.16
NR2E3-204ENST00000621736 PRDM2Q13029 1718 aa28.52■■■□□ 2.16
NR2E3-204ENST00000621736 CEP164Q9UPV0 1460 aa28.48■■■□□ 2.15
NR2E3-204ENST00000621736 MRC2Q9UBG0 1479 aa28.43■■■□□ 2.14
NR2E3-204ENST00000621736 WDR62O43379 1518 aa28.35■■■□□ 2.13
NR2E3-204ENST00000621736 URB2Q14146 1524 aaKnown RBP28.26■■■□□ 2.11
NR2E3-204ENST00000621736 TOPBP1Q92547 1522 aa28.08■■■□□ 2.09
NR2E3-204ENST00000621736 ABCC8Q09428 1581 aa28.05■■■□□ 2.08
NR2E3-204ENST00000621736 DNMBPQ6XZF7 1577 aa28.05■■■□□ 2.08
NR2E3-204ENST00000621736 CUX1P39880 1505 aa27.9■■■□□ 2.06
NR2E3-204ENST00000621736 IFT140Q96RY7 1462 aa27.88■■■□□ 2.05
NR2E3-204ENST00000621736 POLA1P09884 1462 aaPredicted RBP27.85■■■□□ 2.05
NR2E3-204ENST00000621736 TARBP1Q13395 1621 aaKnown RBP27.79■■■□□ 2.04
NR2E3-204ENST00000621736 FGD5Q6ZNL6 1462 aa27.79■■■□□ 2.04
NR2E3-204ENST00000621736 ZNF608Q9ULD9 1512 aaPredicted RBP27.77■■■□□ 2.04
NR2E3-204ENST00000621736 RAD54L2Q9Y4B4 1467 aa27.74■■■□□ 2.03
NR2E3-204ENST00000621736 SOGA1O94964 1423 aa27.72■■■□□ 2.03
NR2E3-204ENST00000621736 WRNQ14191 1432 aaPredicted RBP eCLIP27.72■■■□□ 2.03
NR2E3-204ENST00000621736 SYNJ1O43426 1573 aa27.68■■■□□ 2.02
NR2E3-204ENST00000621736 BIVM-ERCC5R4GMW8 1640 aa27.68■■■□□ 2.02
NR2E3-204ENST00000621736 EIF4G3O43432 1585 aaKnown RBP27.67■■■□□ 2.02
NR2E3-204ENST00000621736 TOP2BQ02880 1626 aa27.67■■■□□ 2.02
NR2E3-204ENST00000621736 AQRO60306 1485 aaKnown RBP eCLIP27.62■■■□□ 2.01
NR2E3-204ENST00000621736 WDR97A6NE52 1622 aa27.59■■■□□ 2.01
NR2E3-204ENST00000621736 DNAJC5Q9H3Z4 198 aa27.59■■■□□ 2.01
NR2E3-204ENST00000621736 TDRD9Q8NDG6 1382 aaKnown RBP27.56■■■□□ 2
NR2E3-204ENST00000621736 ABCA10Q8WWZ4 1543 aa27.52■■■□□ 2
NR2E3-204ENST00000621736 ABCA5Q8WWZ7 1642 aa27.42■■□□□ 1.98
NR2E3-204ENST00000621736 GAPVD1Q14C86 1478 aa27.4■■□□□ 1.98
NR2E3-204ENST00000621736 GRIN2BQ13224 1484 aa27.39■■□□□ 1.97
NR2E3-204ENST00000621736 PBRM1Q86U86 1689 aa27.38■■□□□ 1.97
NR2E3-204ENST00000621736 SNAPC4Q5SXM2 1469 aa27.35■■□□□ 1.97
NR2E3-204ENST00000621736 OSCARQ8IYS5 282 aa27.34■■□□□ 1.97
NR2E3-204ENST00000621736 CHD1O14646 1710 aa27.33■■□□□ 1.97
NR2E3-204ENST00000621736 MAGI1Q96QZ7 1491 aaPredicted RBP27.31■■□□□ 1.96
NR2E3-204ENST00000621736 FBLN2P98095 1184 aa27.24■■□□□ 1.95
NR2E3-204ENST00000621736 SYNJ2O15056 1496 aa27.21■■□□□ 1.95
NR2E3-204ENST00000621736 ERICH3Q5RHP9 1530 aa27.18■■□□□ 1.94
NR2E3-204ENST00000621736 CHMP7Q8WUX9 453 aaPredicted RBP27.17■■□□□ 1.94
NR2E3-204ENST00000621736 ADAMTS12P58397 1594 aa27.15■■□□□ 1.94
NR2E3-204ENST00000621736 KIF27Q86VH2 1401 aa27.12■■□□□ 1.93
NR2E3-204ENST00000621736 FHAD1B1AJZ9 1412 aa27.09■■□□□ 1.93
NR2E3-204ENST00000621736 TRIM41Q8WV44 630 aa27.07■■□□□ 1.92
NR2E3-204ENST00000621736 GRIN2AQ12879 1464 aa27.05■■□□□ 1.92
NR2E3-204ENST00000621736 IGF1RP08069 1367 aa27.03■■□□□ 1.92
NR2E3-204ENST00000621736 CLASP1Q7Z460 1538 aa27.02■■□□□ 1.92
NR2E3-204ENST00000621736 CUL7Q14999 1698 aa26.96■■□□□ 1.91
NR2E3-204ENST00000621736 RUSC2Q8N2Y8 1516 aa26.95■■□□□ 1.9
NR2E3-204ENST00000621736 RIMBP3CA6NJZ7 1639 aa26.94■■□□□ 1.9
NR2E3-204ENST00000621736 RIMBP3BA6NNM3 1639 aa26.94■■□□□ 1.9
NR2E3-204ENST00000621736 RIMBP3Q9UFD9 1639 aa26.94■■□□□ 1.9
NR2E3-204ENST00000621736 CEP170Q5SW79 1584 aa26.93■■□□□ 1.9
NR2E3-204ENST00000621736 NUP160Q12769 1436 aa26.93■■□□□ 1.9
NR2E3-204ENST00000621736 ARHGEF11O15085 1522 aa26.93■■□□□ 1.9
NR2E3-204ENST00000621736 CARMIL1Q5VZK9 1371 aa26.86■■□□□ 1.89
NR2E3-204ENST00000621736 CHIC1Q5VXU3 224 aa26.81■■□□□ 1.88
NR2E3-204ENST00000621736 SHROOM2Q13796 1616 aa26.74■■□□□ 1.87
NR2E3-204ENST00000621736 ARAP1Q96P48 1450 aa26.72■■□□□ 1.87
NR2E3-204ENST00000621736 RAPGEF2Q9Y4G8 1499 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms