Protein–RNA interactions for Protein: Q96MP5

ZSWIM3, Zinc finger SWIM domain-containing protein 3, humanhuman

Predictions only

Length 696 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM3Q96MP5 ERN1-208ENST00000606895 2068 ntBASIC24.5■■□□□ 1.51
ZSWIM3Q96MP5 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
ZSWIM3Q96MP5 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
ZSWIM3Q96MP5 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
ZSWIM3Q96MP5 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
ZSWIM3Q96MP5 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC24.5■■□□□ 1.51
ZSWIM3Q96MP5 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
ZSWIM3Q96MP5 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.49■■□□□ 1.51
ZSWIM3Q96MP5 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC24.49■■□□□ 1.51
ZSWIM3Q96MP5 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC24.49■■□□□ 1.51
ZSWIM3Q96MP5 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC24.49■■□□□ 1.51
ZSWIM3Q96MP5 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
ZSWIM3Q96MP5 RALB-208ENST00000631312 311 ntTSL 5 BASIC24.49■■□□□ 1.51
ZSWIM3Q96MP5 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
ZSWIM3Q96MP5 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
ZSWIM3Q96MP5 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
ZSWIM3Q96MP5 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC24.49■■□□□ 1.51
ZSWIM3Q96MP5 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
ZSWIM3Q96MP5 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
ZSWIM3Q96MP5 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
ZSWIM3Q96MP5 PKM-203ENST00000389093 2279 ntTSL 5 BASIC24.48■■□□□ 1.51
ZSWIM3Q96MP5 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
ZSWIM3Q96MP5 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC24.48■■□□□ 1.51
ZSWIM3Q96MP5 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC24.48■■□□□ 1.51
ZSWIM3Q96MP5 AL356740.2-201ENST00000601559 647 ntBASIC24.48■■□□□ 1.51
ZSWIM3Q96MP5 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
ZSWIM3Q96MP5 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC24.47■■□□□ 1.51
ZSWIM3Q96MP5 AC096887.2-201ENST00000623443 1957 ntBASIC24.47■■□□□ 1.51
ZSWIM3Q96MP5 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
ZSWIM3Q96MP5 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
ZSWIM3Q96MP5 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC24.47■■□□□ 1.51
ZSWIM3Q96MP5 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC24.47■■□□□ 1.51
ZSWIM3Q96MP5 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC24.47■■□□□ 1.51
ZSWIM3Q96MP5 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
ZSWIM3Q96MP5 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
ZSWIM3Q96MP5 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC24.47■■□□□ 1.51
ZSWIM3Q96MP5 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
ZSWIM3Q96MP5 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC24.46■■□□□ 1.51
ZSWIM3Q96MP5 QDPR-206ENST00000508623 601 ntTSL 3 BASIC24.46■■□□□ 1.51
ZSWIM3Q96MP5 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC24.46■■□□□ 1.51
ZSWIM3Q96MP5 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC24.45■■□□□ 1.51
ZSWIM3Q96MP5 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC24.45■■□□□ 1.5
ZSWIM3Q96MP5 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC24.45■■□□□ 1.5
ZSWIM3Q96MP5 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
ZSWIM3Q96MP5 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC24.45■■□□□ 1.5
ZSWIM3Q96MP5 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
ZSWIM3Q96MP5 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
ZSWIM3Q96MP5 CD72-202ENST00000378430 585 ntTSL 3 BASIC24.44■■□□□ 1.5
ZSWIM3Q96MP5 AC110285.6-201ENST00000617652 491 ntBASIC24.44■■□□□ 1.5
ZSWIM3Q96MP5 RASSF1-AS1-201ENST00000629828 790 ntBASIC24.44■■□□□ 1.5
ZSWIM3Q96MP5 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.44■■□□□ 1.5
ZSWIM3Q96MP5 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
ZSWIM3Q96MP5 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
ZSWIM3Q96MP5 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ZSWIM3Q96MP5 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
ZSWIM3Q96MP5 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
ZSWIM3Q96MP5 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
ZSWIM3Q96MP5 AK3-203ENST00000447596 705 ntTSL 2 BASIC24.43■■□□□ 1.5
ZSWIM3Q96MP5 AL512631.2-201ENST00000604634 923 ntBASIC24.43■■□□□ 1.5
ZSWIM3Q96MP5 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
ZSWIM3Q96MP5 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ZSWIM3Q96MP5 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
ZSWIM3Q96MP5 AC090877.2-201ENST00000558441 1738 ntBASIC24.42■■□□□ 1.5
ZSWIM3Q96MP5 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
ZSWIM3Q96MP5 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC24.42■■□□□ 1.5
ZSWIM3Q96MP5 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
ZSWIM3Q96MP5 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
ZSWIM3Q96MP5 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
ZSWIM3Q96MP5 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
ZSWIM3Q96MP5 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
ZSWIM3Q96MP5 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
ZSWIM3Q96MP5 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC24.41■■□□□ 1.5
ZSWIM3Q96MP5 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
ZSWIM3Q96MP5 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
ZSWIM3Q96MP5 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
ZSWIM3Q96MP5 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
ZSWIM3Q96MP5 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
ZSWIM3Q96MP5 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
ZSWIM3Q96MP5 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
ZSWIM3Q96MP5 AC096631.2-201ENST00000436136 790 ntBASIC24.4■■□□□ 1.5
ZSWIM3Q96MP5 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC24.4■■□□□ 1.5
ZSWIM3Q96MP5 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
ZSWIM3Q96MP5 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
ZSWIM3Q96MP5 CLTA-206ENST00000466396 695 ntTSL 2 BASIC24.39■■□□□ 1.49
ZSWIM3Q96MP5 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC24.39■■□□□ 1.49
ZSWIM3Q96MP5 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
ZSWIM3Q96MP5 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
ZSWIM3Q96MP5 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
ZSWIM3Q96MP5 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC24.39■■□□□ 1.49
ZSWIM3Q96MP5 AC097639.1-201ENST00000565519 1891 ntBASIC24.38■■□□□ 1.49
ZSWIM3Q96MP5 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC24.38■■□□□ 1.49
ZSWIM3Q96MP5 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC24.38■■□□□ 1.49
ZSWIM3Q96MP5 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC24.38■■□□□ 1.49
ZSWIM3Q96MP5 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
ZSWIM3Q96MP5 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC24.38■■□□□ 1.49
ZSWIM3Q96MP5 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC24.38■■□□□ 1.49
ZSWIM3Q96MP5 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
ZSWIM3Q96MP5 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
ZSWIM3Q96MP5 SNX5-217ENST00000606557 1087 ntBASIC24.37■■□□□ 1.49
ZSWIM3Q96MP5 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms