Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC29.43■■■□□ 2.3
DDX60Q8IY21 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC29.43■■■□□ 2.3
DDX60Q8IY21 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC29.43■■■□□ 2.3
DDX60Q8IY21 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
DDX60Q8IY21 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
DDX60Q8IY21 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC29.43■■■□□ 2.3
DDX60Q8IY21 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC29.43■■■□□ 2.3
DDX60Q8IY21 MIR4466-201ENST00000606121 54 ntBASIC29.42■■■□□ 2.3
DDX60Q8IY21 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC29.42■■■□□ 2.3
DDX60Q8IY21 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
DDX60Q8IY21 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC29.42■■■□□ 2.3
DDX60Q8IY21 AC010501.1-201ENST00000606270 1962 ntBASIC29.42■■■□□ 2.3
DDX60Q8IY21 TK2-202ENST00000417693 1046 ntTSL 2 BASIC29.42■■■□□ 2.3
DDX60Q8IY21 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
DDX60Q8IY21 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC29.41■■■□□ 2.3
DDX60Q8IY21 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC29.41■■■□□ 2.3
DDX60Q8IY21 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC29.41■■■□□ 2.3
DDX60Q8IY21 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
DDX60Q8IY21 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
DDX60Q8IY21 MIR638-201ENST00000385237 100 ntBASIC29.4■■■□□ 2.3
DDX60Q8IY21 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
DDX60Q8IY21 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
DDX60Q8IY21 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC29.4■■■□□ 2.3
DDX60Q8IY21 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC29.4■■■□□ 2.3
DDX60Q8IY21 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
DDX60Q8IY21 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC29.4■■■□□ 2.3
DDX60Q8IY21 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC29.4■■■□□ 2.3
DDX60Q8IY21 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC29.39■■■□□ 2.3
DDX60Q8IY21 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
DDX60Q8IY21 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
DDX60Q8IY21 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC29.39■■■□□ 2.3
DDX60Q8IY21 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.3
DDX60Q8IY21 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
DDX60Q8IY21 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
DDX60Q8IY21 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
DDX60Q8IY21 AC097639.1-201ENST00000565519 1891 ntBASIC29.38■■■□□ 2.29
DDX60Q8IY21 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC29.38■■■□□ 2.29
DDX60Q8IY21 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC29.38■■■□□ 2.29
DDX60Q8IY21 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
DDX60Q8IY21 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC29.38■■■□□ 2.29
DDX60Q8IY21 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC29.38■■■□□ 2.29
DDX60Q8IY21 MIR3621-201ENST00000580529 85 ntBASIC29.38■■■□□ 2.29
DDX60Q8IY21 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
DDX60Q8IY21 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC29.38■■■□□ 2.29
DDX60Q8IY21 RPP21-222ENST00000433076 577 ntTSL 2 BASIC29.37■■■□□ 2.29
DDX60Q8IY21 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC29.37■■■□□ 2.29
DDX60Q8IY21 RASSF1-AS1-201ENST00000629828 790 ntBASIC29.37■■■□□ 2.29
DDX60Q8IY21 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC29.37■■■□□ 2.29
DDX60Q8IY21 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC29.36■■■□□ 2.29
DDX60Q8IY21 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC29.36■■■□□ 2.29
DDX60Q8IY21 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
DDX60Q8IY21 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC29.35■■■□□ 2.29
DDX60Q8IY21 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
DDX60Q8IY21 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
DDX60Q8IY21 CD72-202ENST00000378430 585 ntTSL 3 BASIC29.35■■■□□ 2.29
DDX60Q8IY21 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC29.35■■■□□ 2.29
DDX60Q8IY21 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
DDX60Q8IY21 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
DDX60Q8IY21 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC29.35■■■□□ 2.29
DDX60Q8IY21 AL136116.3-201ENST00000402907 1138 ntBASIC29.34■■■□□ 2.29
DDX60Q8IY21 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC29.34■■■□□ 2.29
DDX60Q8IY21 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC29.34■■■□□ 2.29
DDX60Q8IY21 CLTA-210ENST00000540080 989 ntTSL 2 BASIC29.34■■■□□ 2.29
DDX60Q8IY21 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
DDX60Q8IY21 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
DDX60Q8IY21 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC29.34■■■□□ 2.29
DDX60Q8IY21 AC110285.6-201ENST00000617652 491 ntBASIC29.34■■■□□ 2.29
DDX60Q8IY21 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
DDX60Q8IY21 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
DDX60Q8IY21 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC29.33■■■□□ 2.29
DDX60Q8IY21 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
DDX60Q8IY21 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC29.33■■■□□ 2.29
DDX60Q8IY21 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC29.32■■■□□ 2.28
DDX60Q8IY21 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC29.32■■■□□ 2.28
DDX60Q8IY21 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC29.32■■■□□ 2.28
DDX60Q8IY21 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC29.32■■■□□ 2.28
DDX60Q8IY21 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC29.32■■■□□ 2.28
DDX60Q8IY21 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
DDX60Q8IY21 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC29.32■■■□□ 2.28
DDX60Q8IY21 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
DDX60Q8IY21 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC29.31■■■□□ 2.28
DDX60Q8IY21 CLTA-206ENST00000466396 695 ntTSL 2 BASIC29.31■■■□□ 2.28
DDX60Q8IY21 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC29.31■■■□□ 2.28
DDX60Q8IY21 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
DDX60Q8IY21 TFPT-201ENST00000391757 774 ntTSL 5 BASIC29.31■■■□□ 2.28
DDX60Q8IY21 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
DDX60Q8IY21 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC29.31■■■□□ 2.28
DDX60Q8IY21 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC29.31■■■□□ 2.28
DDX60Q8IY21 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
DDX60Q8IY21 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
DDX60Q8IY21 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
DDX60Q8IY21 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC29.29■■■□□ 2.28
DDX60Q8IY21 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC29.29■■■□□ 2.28
DDX60Q8IY21 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
DDX60Q8IY21 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC29.28■■■□□ 2.28
DDX60Q8IY21 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
DDX60Q8IY21 AC090877.2-201ENST00000558441 1738 ntBASIC29.28■■■□□ 2.28
DDX60Q8IY21 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
DDX60Q8IY21 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC29.28■■■□□ 2.28
DDX60Q8IY21 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms