Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC43.28■■■■■ 4.52
DDX60Q8IY21 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC42.42■■■■■ 4.38
DDX60Q8IY21 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC42.13■■■■■ 4.33
DDX60Q8IY21 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC41.92■■■■■ 4.3
DDX60Q8IY21 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC41.87■■■■■ 4.29
DDX60Q8IY21 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC41.84■■■■■ 4.29
DDX60Q8IY21 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC41.83■■■■■ 4.29
DDX60Q8IY21 AL356512.1-201ENST00000607453 1739 ntBASIC41.62■■■■■ 4.25
DDX60Q8IY21 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC40.69■■■■■ 4.1
DDX60Q8IY21 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC40.68■■■■■ 4.1
DDX60Q8IY21 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC40.64■■■■■ 4.1
DDX60Q8IY21 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC40.62■■■■■ 4.09
DDX60Q8IY21 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC40.56■■■■■ 4.08
DDX60Q8IY21 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC40.54■■■■■ 4.08
DDX60Q8IY21 HES6-203ENST00000409160 1600 ntTSL 2 BASIC40.47■■■■■ 4.07
DDX60Q8IY21 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC40.18■■■■■ 4.02
DDX60Q8IY21 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC40.16■■■■■ 4.02
DDX60Q8IY21 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC40.1■■■■■ 4.01
DDX60Q8IY21 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC40.03■■■■■ 4
DDX60Q8IY21 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC39.94■■■■□ 3.98
DDX60Q8IY21 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC39.86■■■■□ 3.97
DDX60Q8IY21 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC39.83■■■■□ 3.97
DDX60Q8IY21 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC39.72■■■■□ 3.95
DDX60Q8IY21 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC39.47■■■■□ 3.91
DDX60Q8IY21 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC39.46■■■■□ 3.91
DDX60Q8IY21 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC39.46■■■■□ 3.91
DDX60Q8IY21 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC39.31■■■■□ 3.88
DDX60Q8IY21 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC39.2■■■■□ 3.87
DDX60Q8IY21 INO80B-203ENST00000409917 796 ntTSL 2 BASIC39.06■■■■□ 3.84
DDX60Q8IY21 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC38.96■■■■□ 3.83
DDX60Q8IY21 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC38.93■■■■□ 3.82
DDX60Q8IY21 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC38.89■■■■□ 3.82
DDX60Q8IY21 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC38.86■■■■□ 3.81
DDX60Q8IY21 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC38.8■■■■□ 3.8
DDX60Q8IY21 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC38.73■■■■□ 3.79
DDX60Q8IY21 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC38.72■■■■□ 3.79
DDX60Q8IY21 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC38.72■■■■□ 3.79
DDX60Q8IY21 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC38.63■■■■□ 3.78
DDX60Q8IY21 AC015813.7-201ENST00000623294 581 ntBASIC38.58■■■■□ 3.77
DDX60Q8IY21 AC006077.2-201ENST00000623591 457 ntBASIC38.56■■■■□ 3.76
DDX60Q8IY21 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC38.49■■■■□ 3.75
DDX60Q8IY21 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC38.49■■■■□ 3.75
DDX60Q8IY21 ZNRF2P1-201ENST00000441407 443 ntBASIC38.43■■■■□ 3.74
DDX60Q8IY21 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC38.33■■■■□ 3.73
DDX60Q8IY21 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC38.31■■■■□ 3.72
DDX60Q8IY21 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC38■■■■□ 3.67
DDX60Q8IY21 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC37.95■■■■□ 3.67
DDX60Q8IY21 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC37.94■■■■□ 3.66
DDX60Q8IY21 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC37.92■■■■□ 3.66
DDX60Q8IY21 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC37.9■■■■□ 3.66
DDX60Q8IY21 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC37.77■■■■□ 3.64
DDX60Q8IY21 AP002365.1-201ENST00000603448 772 ntBASIC37.7■■■■□ 3.63
DDX60Q8IY21 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC37.65■■■■□ 3.62
DDX60Q8IY21 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC37.64■■■■□ 3.62
DDX60Q8IY21 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC37.63■■■■□ 3.61
DDX60Q8IY21 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC37.51■■■■□ 3.6
DDX60Q8IY21 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC37.5■■■■□ 3.59
DDX60Q8IY21 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC37.49■■■■□ 3.59
DDX60Q8IY21 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC37.49■■■■□ 3.59
DDX60Q8IY21 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC37.48■■■■□ 3.59
DDX60Q8IY21 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC37.46■■■■□ 3.59
DDX60Q8IY21 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC37.46■■■■□ 3.59
DDX60Q8IY21 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC37.45■■■■□ 3.59
DDX60Q8IY21 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC37.44■■■■□ 3.58
DDX60Q8IY21 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC37.43■■■■□ 3.58
DDX60Q8IY21 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC37.38■■■■□ 3.57
DDX60Q8IY21 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC37.38■■■■□ 3.57
DDX60Q8IY21 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC37.38■■■■□ 3.57
DDX60Q8IY21 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC37.27■■■■□ 3.56
DDX60Q8IY21 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC37.21■■■■□ 3.55
DDX60Q8IY21 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC37.21■■■■□ 3.55
DDX60Q8IY21 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC37.2■■■■□ 3.55
DDX60Q8IY21 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC37.19■■■■□ 3.54
DDX60Q8IY21 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC37.19■■■■□ 3.54
DDX60Q8IY21 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC37.18■■■■□ 3.54
DDX60Q8IY21 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC37.17■■■■□ 3.54
DDX60Q8IY21 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC37.16■■■■□ 3.54
DDX60Q8IY21 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC37.11■■■■□ 3.53
DDX60Q8IY21 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC37.07■■■■□ 3.52
DDX60Q8IY21 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC37.06■■■■□ 3.52
DDX60Q8IY21 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC37.03■■■■□ 3.52
DDX60Q8IY21 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC37.03■■■■□ 3.52
DDX60Q8IY21 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC37.02■■■■□ 3.52
DDX60Q8IY21 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC37.02■■■■□ 3.52
DDX60Q8IY21 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC36.99■■■■□ 3.51
DDX60Q8IY21 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC36.96■■■■□ 3.51
DDX60Q8IY21 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC36.93■■■■□ 3.5
DDX60Q8IY21 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC36.88■■■■□ 3.49
DDX60Q8IY21 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC36.86■■■■□ 3.49
DDX60Q8IY21 DYNLL1-208ENST00000550178 581 ntBASIC36.86■■■■□ 3.49
DDX60Q8IY21 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC36.85■■■■□ 3.49
DDX60Q8IY21 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC36.82■■■■□ 3.49
DDX60Q8IY21 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC36.82■■■■□ 3.48
DDX60Q8IY21 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC36.81■■■■□ 3.48
DDX60Q8IY21 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC36.79■■■■□ 3.48
DDX60Q8IY21 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC36.79■■■■□ 3.48
DDX60Q8IY21 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC36.78■■■■□ 3.48
DDX60Q8IY21 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC36.68■■■■□ 3.46
DDX60Q8IY21 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC36.66■■■■□ 3.46
DDX60Q8IY21 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC36.65■■■■□ 3.46
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms