Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.226e-8■■■■□ 26
SND1Q7KZF4 SLC39A14-207ENST00000518348 1086 ntTSL 211.89□□□□□ -0.519e-19■■■■□ 26
SND1Q7KZF4 SLC1A2-204ENST00000449068 685 ntTSL 312.7□□□□□ -0.384e-14■■■■□ 26
SND1Q7KZF4 CD164-209ENST00000512212 590 ntTSL 214.72□□□□□ -0.055e-10■■■■□ 26
SND1Q7KZF4 GLMP-203ENST00000461597 658 ntTSL 316.36■□□□□ 0.215e-8■■■■□ 26
SND1Q7KZF4 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.68e-7■■■■□ 25.9
SND1Q7KZF4 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC7.71□□□□□ -1.188e-7■■■■□ 25.9
SND1Q7KZF4 MGST1-219ENST00000624056 1842 nt8.81□□□□□ -13e-12■■■■□ 25.9
SND1Q7KZF4 SERPINH1-207ENST00000526397 882 ntTSL 518.02■□□□□ 0.486e-18■■■■□ 25.9
SND1Q7KZF4 SERPINH1-204ENST00000525611 974 ntTSL 518.02■□□□□ 0.486e-18■■■■□ 25.9
SND1Q7KZF4 SMOC1-203ENST00000553839 551 ntTSL 511.55□□□□□ -0.561e-6■■■■□ 25.9
SND1Q7KZF4 KRT19-205ENST00000471565 654 ntTSL 217.6■□□□□ 0.411e-8■■■■□ 25.9
SND1Q7KZF4 CD81-208ENST00000492252 1136 ntTSL 318.44■□□□□ 0.541e-13■■■■□ 25.9
SND1Q7KZF4 GPAA1-216ENST00000531593 543 ntTSL 316.87■□□□□ 0.293e-9■■■■□ 25.9
SND1Q7KZF4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.112e-6■■■■□ 25.9
SND1Q7KZF4 UGGT1-203ENST00000418197 599 ntTSL 510.01□□□□□ -0.819e-7■■■■□ 25.9
SND1Q7KZF4 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.251e-323■■■■□ 25.8
SND1Q7KZF4 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.181e-323■■■■□ 25.8
SND1Q7KZF4 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.49■■□□□ 1.031e-323■■■■□ 25.8
SND1Q7KZF4 SLC38A2-201ENST00000256689 4888 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.751e-21■■■■□ 25.8
SND1Q7KZF4 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC6.16□□□□□ -1.421e-21■■■■□ 25.8
SND1Q7KZF4 SLC38A2-208ENST00000549258 4384 ntTSL 24.53□□□□□ -1.681e-21■■■■□ 25.8
SND1Q7KZF4 TGFBI-213ENST00000514554 1691 ntTSL 516.68■□□□□ 0.261e-10■■■■□ 25.8
SND1Q7KZF4 LMAN2L-209ENST00000480869 569 ntTSL 415.77■□□□□ 0.121e-6■■■■□ 25.8
SND1Q7KZF4 PLOD3-204ENST00000424135 565 ntTSL 512.11□□□□□ -0.477e-8■■■■□ 25.8
SND1Q7KZF4 GPAA1-209ENST00000527653 856 ntTSL 219.98■□□□□ 0.793e-9■■■■□ 25.8
SND1Q7KZF4 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.192e-9■■■■□ 25.7
SND1Q7KZF4 PSMA3-204ENST00000553677 363 ntTSL 56.15□□□□□ -1.422e-7■■■■□ 25.7
SND1Q7KZF4 SOSTDC1-201ENST00000307068 1869 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.821e-8■■■■□ 25.7
SND1Q7KZF4 SOSTDC1-202ENST00000396652 2411 ntTSL 2 BASIC9.04□□□□□ -0.961e-8■■■■□ 25.7
SND1Q7KZF4 ADM-207ENST00000530439 1839 ntTSL 2 BASIC22.06■■□□□ 1.124e-9■■■■□ 25.7
SND1Q7KZF4 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.044e-9■■■■□ 25.7
SND1Q7KZF4 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.45■□□□□ 0.544e-9■■■■□ 25.7
SND1Q7KZF4 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.474e-9■■■■□ 25.7
SND1Q7KZF4 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.14e-9■■■■□ 25.7
SND1Q7KZF4 ADM-204ENST00000526492 641 ntTSL 3 BASIC12.17□□□□□ -0.464e-9■■■■□ 25.7
SND1Q7KZF4 SLC2A3-207ENST00000495813 1784 ntTSL 210.16□□□□□ -0.784e-9■■■■□ 25.7
SND1Q7KZF4 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.52■□□□□ 0.235e-10■■■■□ 25.7
SND1Q7KZF4 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.195e-10■■■■□ 25.7
SND1Q7KZF4 GRN-222ENST00000639447 1314 ntTSL 2 BASIC15.17■□□□□ 0.025e-10■■■■□ 25.7
SND1Q7KZF4 CEPT1-204ENST00000473474 764 ntTSL 56.92□□□□□ -1.31e-6■■■■□ 25.7
SND1Q7KZF4 LRG1-202ENST00000586883 571 ntTSL 410.1□□□□□ -0.794e-9■■■■□ 25.7
SND1Q7KZF4 PSAP-206ENST00000633965 500 ntTSL 58.23□□□□□ -1.092e-34■■■■□ 25.7
SND1Q7KZF4 SUN1-223ENST00000459810 569 ntTSL 420.3■□□□□ 0.848e-8■■■■□ 25.6
SND1Q7KZF4 SLC11A2-225ENST00000551215 609 ntTSL 58.86□□□□□ -0.999e-7■■■■□ 25.6
SND1Q7KZF4 MATN3-203ENST00000478482 793 ntTSL 38.43□□□□□ -1.061e-20■■■■□ 25.6
SND1Q7KZF4 CES1-209ENST00000569260 499 ntTSL 54.85□□□□□ -1.633e-14■■■■□ 25.6
SND1Q7KZF4 TPP1-203ENST00000436873 560 ntTSL 416.22■□□□□ 0.195e-9■■■■□ 25.6
SND1Q7KZF4 TM9SF1-211ENST00000531406 1089 ntTSL 213.22□□□□□ -0.294e-9■■■■□ 25.6
SND1Q7KZF4 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.323e-6■■■■□ 25.6
SND1Q7KZF4 SERPINA5-211ENST00000556730 1463 ntTSL 211.25□□□□□ -0.614e-13■■■■□ 25.6
SND1Q7KZF4 GNS-206ENST00000541781 1846 ntTSL 55.96□□□□□ -1.464e-7■■■■□ 25.6
SND1Q7KZF4 LAPTM5-202ENST00000464569 953 ntTSL 517.49■□□□□ 0.392e-7■■■■□ 25.6
SND1Q7KZF4 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.322e-7■■■■□ 25.6
SND1Q7KZF4 PLD3-213ENST00000488311 750 ntTSL 212.58□□□□□ -0.41e-10■■■■□ 25.6
SND1Q7KZF4 TMEM14C-204ENST00000495549 479 ntTSL 212.25□□□□□ -0.455e-10■■■■□ 25.6
SND1Q7KZF4 C4BPA-201ENST00000367070 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.888e-7■■■■□ 25.6
SND1Q7KZF4 LEMD2-202ENST00000421671 2323 ntTSL 323.79■■□□□ 1.47e-7■■■■□ 25.6
SND1Q7KZF4 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 17e-7■■■■□ 25.6
SND1Q7KZF4 FOXRED2-205ENST00000423980 567 ntTSL 420.52■□□□□ 0.889e-7■■■■□ 25.6
SND1Q7KZF4 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.837e-7■■■■□ 25.6
SND1Q7KZF4 FKBP9-213ENST00000494374 1549 ntTSL 519.64■□□□□ 0.737e-7■■■■□ 25.6
SND1Q7KZF4 TAP1-203ENST00000487296 1031 ntTSL 519.47■□□□□ 0.717e-7■■■■□ 25.6
SND1Q7KZF4 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.43■□□□□ 0.77e-7■■■■□ 25.6
SND1Q7KZF4 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.677e-7■■■■□ 25.6
SND1Q7KZF4 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.587e-7■■■■□ 25.6
SND1Q7KZF4 KDELC1-202ENST00000460338 2083 ntTSL 518.46■□□□□ 0.557e-7■■■■□ 25.6
SND1Q7KZF4 LEMD2-206ENST00000506578 1684 ntTSL 518.18■□□□□ 0.57e-7■■■■□ 25.6
SND1Q7KZF4 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.86■□□□□ 0.457e-7■■■■□ 25.6
SND1Q7KZF4 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.427e-7■■■■□ 25.6
SND1Q7KZF4 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.377e-7■■■■□ 25.6
SND1Q7KZF4 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.377e-7■■■■□ 25.6
SND1Q7KZF4 ITGB2-209ENST00000475170 2125 ntTSL 217.32■□□□□ 0.367e-7■■■■□ 25.6
SND1Q7KZF4 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.79■□□□□ 0.287e-7■■■■□ 25.6
SND1Q7KZF4 ITGB2-222ENST00000523323 2823 ntTSL 216.37■□□□□ 0.217e-7■■■■□ 25.6
SND1Q7KZF4 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.177e-7■■■■□ 25.6
SND1Q7KZF4 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.167e-7■■■■□ 25.6
SND1Q7KZF4 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.167e-7■■■■□ 25.6
SND1Q7KZF4 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.097e-7■■■■□ 25.6
SND1Q7KZF4 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC15.55■□□□□ 0.087e-7■■■■□ 25.6
SND1Q7KZF4 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC15.28■□□□□ 0.047e-7■■■■□ 25.6
SND1Q7KZF4 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.037e-7■■■■□ 25.6
SND1Q7KZF4 ITGB2-212ENST00000498666 4781 ntTSL 1 (best)15.06■□□□□ 07e-7■■■■□ 25.6
SND1Q7KZF4 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.017e-7■■■■□ 25.6
SND1Q7KZF4 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.057e-7■■■■□ 25.6
SND1Q7KZF4 LEMD2-209ENST00000511171 4870 ntTSL 214.02□□□□□ -0.177e-7■■■■□ 25.6
SND1Q7KZF4 PIP4K2C-204ENST00000548264 403 ntTSL 313.89□□□□□ -0.197e-7■■■■□ 25.6
SND1Q7KZF4 CD99L2-203ENST00000370377 3604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.217e-7■■■■□ 25.6
SND1Q7KZF4 ADGRE5-203ENST00000358600 2751 ntTSL 1 (best) BASIC13.54□□□□□ -0.248e-8■■■■□ 25.6
SND1Q7KZF4 ITGB2-210ENST00000479202 704 ntTSL 213.29□□□□□ -0.287e-7■■■■□ 25.6
SND1Q7KZF4 FKBP9-208ENST00000472007 703 ntTSL 313.18□□□□□ -0.37e-7■■■■□ 25.6
SND1Q7KZF4 PIP4K2C-203ENST00000540759 2876 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.317e-7■■■■□ 25.6
SND1Q7KZF4 LEMD2-207ENST00000508327 1306 ntTSL 2 BASIC12.75□□□□□ -0.377e-7■■■■□ 25.6
SND1Q7KZF4 FKBP9-212ENST00000490776 2699 ntTSL 2 BASIC12.72□□□□□ -0.377e-7■■■■□ 25.6
SND1Q7KZF4 ADGRE5-202ENST00000357355 3054 ntTSL 1 (best) BASIC12.69□□□□□ -0.388e-8■■■■□ 25.6
SND1Q7KZF4 FKBP9-205ENST00000468510 653 ntTSL 212.61□□□□□ -0.397e-7■■■■□ 25.6
SND1Q7KZF4 TAP1-202ENST00000486332 2542 ntTSL 212.53□□□□□ -0.47e-7■■■■□ 25.6
SND1Q7KZF4 ADGRE5-201ENST00000242786 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.448e-8■■■■□ 25.6
SND1Q7KZF4 CD99L2-201ENST00000346693 4935 ntTSL 1 (best)11.98□□□□□ -0.497e-7■■■■□ 25.6
SND1Q7KZF4 FKBP9-202ENST00000418354 780 ntTSL 211.76□□□□□ -0.537e-7■■■■□ 25.6
Retrieved 100 of 13,567 protein–RNA pairs in 77.2 ms