RNA–Protein interactions for RNA: ENST00000471565.2

KRT19-205, Transcript of keratin 19, humanhuman

TSL 2

Gene KRT19, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT19-205ENST00000471565 NISCHQ9Y2I1 1504 aa41.16■■■■■ 4.18
KRT19-205ENST00000471565 CCDC180Q9P1Z9 1646 aa36.48■■■■□ 3.43
KRT19-205ENST00000471565 ABCC9O60706 1549 aa35.82■■■■□ 3.32
KRT19-205ENST00000471565 DCAF8L2P0C7V8 631 aa34.51■■■■□ 3.12
KRT19-205ENST00000471565 RB1CC1Q8TDY2 1594 aa34.37■■■■□ 3.09
KRT19-205ENST00000471565 NACADO15069 1562 aa34.32■■■■□ 3.09
KRT19-205ENST00000471565 ZCCHC6Q5VYS8 1495 aaKnown RBP34.28■■■■□ 3.08
KRT19-205ENST00000471565 MYO15BQ96JP2 1530 aa34.1■■■■□ 3.05
KRT19-205ENST00000471565 DCAF1Q9Y4B6 1507 aa33.99■■■■□ 3.03
KRT19-205ENST00000471565 UNC13AQ9UPW8 1703 aa33.57■■■□□ 2.96
KRT19-205ENST00000471565 PABPN1Q86U42 306 aaKnown RBP eCLIP33.53■■■□□ 2.96
KRT19-205ENST00000471565 SCRIBQ14160 1630 aa33.41■■■□□ 2.94
KRT19-205ENST00000471565 BICRAQ9NZM4 1560 aa33.36■■■□□ 2.93
KRT19-205ENST00000471565 SHROOM4Q9ULL8 1493 aa32.92■■■□□ 2.86
KRT19-205ENST00000471565 DNAJC5BQ9UF47 199 aa32.89■■■□□ 2.86
KRT19-205ENST00000471565 EIF4G1Q04637 1599 aaKnown RBP32.48■■■□□ 2.79
KRT19-205ENST00000471565 CC2D2AQ9P2K1 1620 aa32.34■■■□□ 2.77
KRT19-205ENST00000471565 CECR2Q9BXF3 1484 aa32.15■■■□□ 2.74
KRT19-205ENST00000471565 SMARCA4P51532 1647 aa31.91■■■□□ 2.7
KRT19-205ENST00000471565 BAZ1AQ9NRL2 1556 aaPredicted RBP31.87■■■□□ 2.69
KRT19-205ENST00000471565 ATAD2BQ9ULI0 1458 aa31.76■■■□□ 2.67
KRT19-205ENST00000471565 MROH2BQ7Z745 1585 aa31.76■■■□□ 2.67
KRT19-205ENST00000471565 NCAPD3P42695 1498 aa31.71■■■□□ 2.67
KRT19-205ENST00000471565 SMARCA2P51531 1590 aa31.67■■■□□ 2.66
KRT19-205ENST00000471565 PEG3Q9GZU2 1588 aa31.56■■■□□ 2.64
KRT19-205ENST00000471565 HMGXB3Q12766 1538 aa31.52■■■□□ 2.64
KRT19-205ENST00000471565 BAZ1BQ9UIG0 1483 aaKnown RBP31.5■■■□□ 2.63
KRT19-205ENST00000471565 RSF1Q96T23 1441 aaPredicted RBP31.41■■■□□ 2.62
KRT19-205ENST00000471565 WIZO95785 1651 aa31.4■■■□□ 2.62
KRT19-205ENST00000471565 TOP2AP11388 1531 aaKnown RBP31.04■■■□□ 2.56
KRT19-205ENST00000471565 NESP48681 1621 aa31.01■■■□□ 2.55
KRT19-205ENST00000471565 ERCC6Q03468 1493 aa30.84■■■□□ 2.53
KRT19-205ENST00000471565 LAMC3Q9Y6N6 1575 aa30.83■■■□□ 2.53
KRT19-205ENST00000471565 CADPSQ9ULU8 1353 aa30.82■■■□□ 2.52
KRT19-205ENST00000471565 SUPT5HO00267 1087 aaKnown RBP30.74■■■□□ 2.51
KRT19-205ENST00000471565 CCDC88BA6NC98 1476 aa30.73■■■□□ 2.51
KRT19-205ENST00000471565 PDS5BQ9NTI5 1447 aa30.67■■■□□ 2.5
KRT19-205ENST00000471565 CFTRP13569 1480 aa30.63■■■□□ 2.49
KRT19-205ENST00000471565 KIF21AQ7Z4S6 1674 aa30.56■■■□□ 2.48
KRT19-205ENST00000471565 FANCD2Q9BXW9 1451 aa30.47■■■□□ 2.47
KRT19-205ENST00000471565 THOC2Q8NI27 1593 aaKnown RBP30.45■■■□□ 2.47
KRT19-205ENST00000471565 CUX2O14529 1486 aa30.44■■■□□ 2.46
KRT19-205ENST00000471565 CEP164Q9UPV0 1460 aa30.41■■■□□ 2.46
KRT19-205ENST00000471565 MRC2Q9UBG0 1479 aa30.36■■■□□ 2.45
KRT19-205ENST00000471565 PRDM2Q13029 1718 aa30.29■■■□□ 2.44
KRT19-205ENST00000471565 WDR62O43379 1518 aa30.23■■■□□ 2.43
KRT19-205ENST00000471565 URB2Q14146 1524 aaKnown RBP30.17■■■□□ 2.42
KRT19-205ENST00000471565 TOPBP1Q92547 1522 aa29.98■■■□□ 2.39
KRT19-205ENST00000471565 ABCC8Q09428 1581 aa29.92■■■□□ 2.38
KRT19-205ENST00000471565 DNMBPQ6XZF7 1577 aa29.92■■■□□ 2.38
KRT19-205ENST00000471565 CUX1P39880 1505 aa29.77■■■□□ 2.36
KRT19-205ENST00000471565 IFT140Q96RY7 1462 aa29.77■■■□□ 2.36
KRT19-205ENST00000471565 POLA1P09884 1462 aaPredicted RBP29.74■■■□□ 2.35
KRT19-205ENST00000471565 ZNF608Q9ULD9 1512 aaPredicted RBP29.68■■■□□ 2.34
KRT19-205ENST00000471565 FGD5Q6ZNL6 1462 aa29.68■■■□□ 2.34
KRT19-205ENST00000471565 RAD54L2Q9Y4B4 1467 aa29.65■■■□□ 2.34
KRT19-205ENST00000471565 SOGA1O94964 1423 aa29.62■■■□□ 2.33
KRT19-205ENST00000471565 TARBP1Q13395 1621 aaKnown RBP29.62■■■□□ 2.33
KRT19-205ENST00000471565 WRNQ14191 1432 aaPredicted RBP eCLIP29.6■■■□□ 2.33
KRT19-205ENST00000471565 AQRO60306 1485 aaKnown RBP eCLIP29.53■■■□□ 2.32
KRT19-205ENST00000471565 SYNJ1O43426 1573 aa29.52■■■□□ 2.32
KRT19-205ENST00000471565 DNAJC5Q9H3Z4 198 aa29.52■■■□□ 2.32
KRT19-205ENST00000471565 EIF4G3O43432 1585 aaKnown RBP29.51■■■□□ 2.31
KRT19-205ENST00000471565 TOP2BQ02880 1626 aa29.49■■■□□ 2.31
KRT19-205ENST00000471565 TDRD9Q8NDG6 1382 aaKnown RBP29.49■■■□□ 2.31
KRT19-205ENST00000471565 BIVM-ERCC5R4GMW8 1640 aa29.47■■■□□ 2.31
KRT19-205ENST00000471565 WDR97A6NE52 1622 aa29.36■■■□□ 2.29
KRT19-205ENST00000471565 ABCA10Q8WWZ4 1543 aa29.35■■■□□ 2.29
KRT19-205ENST00000471565 GAPVD1Q14C86 1478 aa29.27■■■□□ 2.28
KRT19-205ENST00000471565 GRIN2BQ13224 1484 aa29.25■■■□□ 2.27
KRT19-205ENST00000471565 OSCARQ8IYS5 282 aa29.25■■■□□ 2.27
KRT19-205ENST00000471565 SNAPC4Q5SXM2 1469 aa29.23■■■□□ 2.27
KRT19-205ENST00000471565 ABCA5Q8WWZ7 1642 aa29.22■■■□□ 2.27
KRT19-205ENST00000471565 FBLN2P98095 1184 aa29.21■■■□□ 2.27
KRT19-205ENST00000471565 PBRM1Q86U86 1689 aa29.15■■■□□ 2.26
KRT19-205ENST00000471565 MAGI1Q96QZ7 1491 aaPredicted RBP29.14■■■□□ 2.26
KRT19-205ENST00000471565 CHD1O14646 1710 aa29.11■■■□□ 2.25
KRT19-205ENST00000471565 CHMP7Q8WUX9 453 aaPredicted RBP29.09■■■□□ 2.25
KRT19-205ENST00000471565 SYNJ2O15056 1496 aa29.04■■■□□ 2.24
KRT19-205ENST00000471565 ERICH3Q5RHP9 1530 aa28.99■■■□□ 2.23
KRT19-205ENST00000471565 TRIM41Q8WV44 630 aa28.98■■■□□ 2.23
KRT19-205ENST00000471565 KIF27Q86VH2 1401 aa28.97■■■□□ 2.23
KRT19-205ENST00000471565 ADAMTS12P58397 1594 aa28.95■■■□□ 2.22
KRT19-205ENST00000471565 FHAD1B1AJZ9 1412 aa28.93■■■□□ 2.22
KRT19-205ENST00000471565 IGF1RP08069 1367 aa28.88■■■□□ 2.21
KRT19-205ENST00000471565 GRIN2AQ12879 1464 aa28.87■■■□□ 2.21
KRT19-205ENST00000471565 CLASP1Q7Z460 1538 aa28.81■■■□□ 2.2
KRT19-205ENST00000471565 RUSC2Q8N2Y8 1516 aa28.79■■■□□ 2.2
KRT19-205ENST00000471565 ARHGEF11O15085 1522 aa28.75■■■□□ 2.19
KRT19-205ENST00000471565 RIMBP3CA6NJZ7 1639 aa28.75■■■□□ 2.19
KRT19-205ENST00000471565 RIMBP3BA6NNM3 1639 aa28.75■■■□□ 2.19
KRT19-205ENST00000471565 RIMBP3Q9UFD9 1639 aa28.75■■■□□ 2.19
KRT19-205ENST00000471565 NUP160Q12769 1436 aa28.74■■■□□ 2.19
KRT19-205ENST00000471565 CEP170Q5SW79 1584 aa28.74■■■□□ 2.19
KRT19-205ENST00000471565 CUL7Q14999 1698 aa28.71■■■□□ 2.19
KRT19-205ENST00000471565 CARMIL1Q5VZK9 1371 aa28.71■■■□□ 2.19
KRT19-205ENST00000471565 CHIC1Q5VXU3 224 aa28.67■■■□□ 2.18
KRT19-205ENST00000471565 CYB5RLQ6IPT4 315 aa28.56■■■□□ 2.16
KRT19-205ENST00000471565 ARAP1Q96P48 1450 aa28.54■■■□□ 2.16
KRT19-205ENST00000471565 RAPGEF2Q9Y4G8 1499 aa28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms