RNA–Protein interactions for RNA: ENST00000531593.1

GPAA1-216, Transcript of glycosylphosphatidylinositol anchor attachment 1, humanhuman

TSL 3

Gene GPAA1, Length 543 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPAA1-216ENST00000531593 NISCHQ9Y2I1 1504 aa40.65■■■■■ 4.1
GPAA1-216ENST00000531593 ABCC9O60706 1549 aa36.3■■■■□ 3.4
GPAA1-216ENST00000531593 CCDC180Q9P1Z9 1646 aa36.26■■■■□ 3.4
GPAA1-216ENST00000531593 RB1CC1Q8TDY2 1594 aa34.5■■■■□ 3.11
GPAA1-216ENST00000531593 DCAF8L2P0C7V8 631 aa34.46■■■■□ 3.11
GPAA1-216ENST00000531593 NACADO15069 1562 aa34.29■■■■□ 3.08
GPAA1-216ENST00000531593 PABPN1Q86U42 306 aaKnown RBP eCLIP33.9■■■■□ 3.02
GPAA1-216ENST00000531593 DNAJC5BQ9UF47 199 aa33.89■■■■□ 3.02
GPAA1-216ENST00000531593 MYO15BQ96JP2 1530 aa33.81■■■■□ 3
GPAA1-216ENST00000531593 ZCCHC6Q5VYS8 1495 aaKnown RBP33.72■■■□□ 2.99
GPAA1-216ENST00000531593 UNC13AQ9UPW8 1703 aa33.67■■■□□ 2.98
GPAA1-216ENST00000531593 BICRAQ9NZM4 1560 aa33.5■■■□□ 2.95
GPAA1-216ENST00000531593 DCAF1Q9Y4B6 1507 aa33.48■■■□□ 2.95
GPAA1-216ENST00000531593 SCRIBQ14160 1630 aa33.24■■■□□ 2.91
GPAA1-216ENST00000531593 SHROOM4Q9ULL8 1493 aa32.95■■■□□ 2.87
GPAA1-216ENST00000531593 CC2D2AQ9P2K1 1620 aa32.7■■■□□ 2.83
GPAA1-216ENST00000531593 EIF4G1Q04637 1599 aaKnown RBP32.67■■■□□ 2.82
GPAA1-216ENST00000531593 CECR2Q9BXF3 1484 aa32.62■■■□□ 2.81
GPAA1-216ENST00000531593 NCAPD3P42695 1498 aa31.69■■■□□ 2.66
GPAA1-216ENST00000531593 ATAD2BQ9ULI0 1458 aa31.67■■■□□ 2.66
GPAA1-216ENST00000531593 SMARCA4P51532 1647 aa31.65■■■□□ 2.66
GPAA1-216ENST00000531593 SMARCA2P51531 1590 aa31.53■■■□□ 2.64
GPAA1-216ENST00000531593 BAZ1AQ9NRL2 1556 aaPredicted RBP31.51■■■□□ 2.64
GPAA1-216ENST00000531593 HMGXB3Q12766 1538 aa31.44■■■□□ 2.62
GPAA1-216ENST00000531593 BAZ1BQ9UIG0 1483 aaKnown RBP31.39■■■□□ 2.62
GPAA1-216ENST00000531593 MROH2BQ7Z745 1585 aa31.38■■■□□ 2.61
GPAA1-216ENST00000531593 ERCC6Q03468 1493 aa31.3■■■□□ 2.6
GPAA1-216ENST00000531593 PEG3Q9GZU2 1588 aa31.26■■■□□ 2.6
GPAA1-216ENST00000531593 NESP48681 1621 aa31.24■■■□□ 2.59
GPAA1-216ENST00000531593 CUX2O14529 1486 aa31.07■■■□□ 2.56
GPAA1-216ENST00000531593 WIZO95785 1651 aa31■■■□□ 2.55
GPAA1-216ENST00000531593 LAMC3Q9Y6N6 1575 aa30.91■■■□□ 2.54
GPAA1-216ENST00000531593 DNAJC5Q9H3Z4 198 aa30.88■■■□□ 2.53
GPAA1-216ENST00000531593 RSF1Q96T23 1441 aaPredicted RBP30.81■■■□□ 2.52
GPAA1-216ENST00000531593 PDS5BQ9NTI5 1447 aa30.79■■■□□ 2.52
GPAA1-216ENST00000531593 CADPSQ9ULU8 1353 aa30.79■■■□□ 2.52
GPAA1-216ENST00000531593 THOC2Q8NI27 1593 aaKnown RBP30.76■■■□□ 2.52
GPAA1-216ENST00000531593 KIF21AQ7Z4S6 1674 aa30.73■■■□□ 2.51
GPAA1-216ENST00000531593 TOP2AP11388 1531 aaKnown RBP30.58■■■□□ 2.49
GPAA1-216ENST00000531593 MRC2Q9UBG0 1479 aa30.52■■■□□ 2.48
GPAA1-216ENST00000531593 FANCD2Q9BXW9 1451 aa30.45■■■□□ 2.47
GPAA1-216ENST00000531593 CFTRP13569 1480 aa30.44■■■□□ 2.46
GPAA1-216ENST00000531593 CEP164Q9UPV0 1460 aa30.44■■■□□ 2.46
GPAA1-216ENST00000531593 WDR62O43379 1518 aa30.39■■■□□ 2.46
GPAA1-216ENST00000531593 CCDC88BA6NC98 1476 aa30.3■■■□□ 2.44
GPAA1-216ENST00000531593 URB2Q14146 1524 aaKnown RBP30.18■■■□□ 2.42
GPAA1-216ENST00000531593 PRDM2Q13029 1718 aa30.02■■■□□ 2.4
GPAA1-216ENST00000531593 TOPBP1Q92547 1522 aa29.89■■■□□ 2.38
GPAA1-216ENST00000531593 ZNF608Q9ULD9 1512 aaPredicted RBP29.81■■■□□ 2.36
GPAA1-216ENST00000531593 IFT140Q96RY7 1462 aa29.81■■■□□ 2.36
GPAA1-216ENST00000531593 TRIM41Q8WV44 630 aa29.78■■■□□ 2.36
GPAA1-216ENST00000531593 SUPT5HO00267 1087 aaKnown RBP29.77■■■□□ 2.36
GPAA1-216ENST00000531593 OSCARQ8IYS5 282 aa29.77■■■□□ 2.36
GPAA1-216ENST00000531593 DNMBPQ6XZF7 1577 aa29.76■■■□□ 2.35
GPAA1-216ENST00000531593 ABCC8Q09428 1581 aa29.75■■■□□ 2.35
GPAA1-216ENST00000531593 POLA1P09884 1462 aaPredicted RBP29.6■■■□□ 2.33
GPAA1-216ENST00000531593 AQRO60306 1485 aaKnown RBP eCLIP29.59■■■□□ 2.336e-8■■■■■ 31.1
GPAA1-216ENST00000531593 EIF4G3O43432 1585 aaKnown RBP29.59■■■□□ 2.33
GPAA1-216ENST00000531593 RAD54L2Q9Y4B4 1467 aa29.55■■■□□ 2.32
GPAA1-216ENST00000531593 TARBP1Q13395 1621 aaKnown RBP29.54■■■□□ 2.32
GPAA1-216ENST00000531593 SOGA1O94964 1423 aa29.5■■■□□ 2.31
GPAA1-216ENST00000531593 TDRD9Q8NDG6 1382 aaKnown RBP29.46■■■□□ 2.31
GPAA1-216ENST00000531593 FGD5Q6ZNL6 1462 aa29.46■■■□□ 2.31
GPAA1-216ENST00000531593 CUX1P39880 1505 aa29.45■■■□□ 2.31
GPAA1-216ENST00000531593 FBLN2P98095 1184 aa29.44■■■□□ 2.3
GPAA1-216ENST00000531593 RIMBP3CA6NJZ7 1639 aa29.32■■■□□ 2.28
GPAA1-216ENST00000531593 RIMBP3BA6NNM3 1639 aa29.32■■■□□ 2.28
GPAA1-216ENST00000531593 RIMBP3Q9UFD9 1639 aa29.32■■■□□ 2.28
GPAA1-216ENST00000531593 CHD1O14646 1710 aa29.31■■■□□ 2.28
GPAA1-216ENST00000531593 SNAPC4Q5SXM2 1469 aa29.28■■■□□ 2.28
GPAA1-216ENST00000531593 ARHGEF11O15085 1522 aa29.26■■■□□ 2.27
GPAA1-216ENST00000531593 CHMP7Q8WUX9 453 aaPredicted RBP29.18■■■□□ 2.26
GPAA1-216ENST00000531593 GRIN2BQ13224 1484 aa29.17■■■□□ 2.26
GPAA1-216ENST00000531593 WDR97A6NE52 1622 aa29.16■■■□□ 2.26
GPAA1-216ENST00000531593 CYB5RLQ6IPT4 315 aa29.14■■■□□ 2.26
GPAA1-216ENST00000531593 MAGI1Q96QZ7 1491 aaPredicted RBP29.12■■■□□ 2.25
GPAA1-216ENST00000531593 GAPVD1Q14C86 1478 aa29.11■■■□□ 2.25
GPAA1-216ENST00000531593 ABCA10Q8WWZ4 1543 aa29.09■■■□□ 2.25
GPAA1-216ENST00000531593 WRNQ14191 1432 aaPredicted RBP eCLIP29.06■■■□□ 2.24
GPAA1-216ENST00000531593 SYNJ2O15056 1496 aa29.04■■■□□ 2.24
GPAA1-216ENST00000531593 ARAP1Q96P48 1450 aa29.02■■■□□ 2.24
GPAA1-216ENST00000531593 PBRM1Q86U86 1689 aa29.02■■■□□ 2.24
GPAA1-216ENST00000531593 SYNJ1O43426 1573 aa29.01■■■□□ 2.24
GPAA1-216ENST00000531593 ABCA5Q8WWZ7 1642 aa29■■■□□ 2.23
GPAA1-216ENST00000531593 CLASP1Q7Z460 1538 aa28.98■■■□□ 2.23
GPAA1-216ENST00000531593 TOP2BQ02880 1626 aa28.98■■■□□ 2.23
GPAA1-216ENST00000531593 BIVM-ERCC5R4GMW8 1640 aa28.95■■■□□ 2.23
GPAA1-216ENST00000531593 GRIN2AQ12879 1464 aa28.8■■■□□ 2.2
GPAA1-216ENST00000531593 ADAMTS12P58397 1594 aa28.79■■■□□ 2.2
GPAA1-216ENST00000531593 TRHP20396 242 aaPredicted RBP28.78■■■□□ 2.2
GPAA1-216ENST00000531593 FHAD1B1AJZ9 1412 aa28.75■■■□□ 2.19
GPAA1-216ENST00000531593 CEP170Q5SW79 1584 aa28.7■■■□□ 2.18
GPAA1-216ENST00000531593 ERICH3Q5RHP9 1530 aa28.69■■■□□ 2.18
GPAA1-216ENST00000531593 NUP160Q12769 1436 aa28.68■■■□□ 2.18
GPAA1-216ENST00000531593 ERCC6L2Q5T890 1561 aa28.64■■■□□ 2.18
GPAA1-216ENST00000531593 KIF27Q86VH2 1401 aa28.48■■■□□ 2.15
GPAA1-216ENST00000531593 IGF1RP08069 1367 aa28.47■■■□□ 2.15
GPAA1-216ENST00000531593 SHROOM2Q13796 1616 aa28.47■■■□□ 2.15
GPAA1-216ENST00000531593 JPH4Q96JJ6 628 aa28.46■■■□□ 2.15
GPAA1-216ENST00000531593 PRG4Q92954 1404 aaPredicted RBP28.45■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 896.3 ms