RNA–Protein interactions for RNA: ENST00000523323.5

ITGB2-222, Transcript of integrin subunit beta 2, humanhuman

TSL 2

Gene ITGB2, Length 2,823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB2-222ENST00000523323 NISCHQ9Y2I1 1504 aa33.1■■■□□ 2.89
ITGB2-222ENST00000523323 CCDC180Q9P1Z9 1646 aa28.26■■■□□ 2.11
ITGB2-222ENST00000523323 SHROOM4Q9ULL8 1493 aa28.2■■■□□ 2.1
ITGB2-222ENST00000523323 DCAF8L2P0C7V8 631 aa28.06■■■□□ 2.08
ITGB2-222ENST00000523323 ZCCHC6Q5VYS8 1495 aaKnown RBP27.85■■■□□ 2.05
ITGB2-222ENST00000523323 SUPT5HO00267 1087 aaKnown RBP27.3■■□□□ 1.96
ITGB2-222ENST00000523323 ABCC9O60706 1549 aa27.14■■□□□ 1.93
ITGB2-222ENST00000523323 DCAF1Q9Y4B6 1507 aa26.93■■□□□ 1.9
ITGB2-222ENST00000523323 SCRIBQ14160 1630 aa26.73■■□□□ 1.87
ITGB2-222ENST00000523323 MYO15BQ96JP2 1530 aa26.33■■□□□ 1.81
ITGB2-222ENST00000523323 NACADO15069 1562 aa26.32■■□□□ 1.8
ITGB2-222ENST00000523323 RB1CC1Q8TDY2 1594 aa26.08■■□□□ 1.77
ITGB2-222ENST00000523323 CECR2Q9BXF3 1484 aa26.07■■□□□ 1.76
ITGB2-222ENST00000523323 CHIC1Q5VXU3 224 aa26.06■■□□□ 1.76
ITGB2-222ENST00000523323 RSF1Q96T23 1441 aaPredicted RBP26.03■■□□□ 1.76
ITGB2-222ENST00000523323 PABPN1Q86U42 306 aaKnown RBP eCLIP25.94■■□□□ 1.74
ITGB2-222ENST00000523323 MROH2BQ7Z745 1585 aa25.83■■□□□ 1.73
ITGB2-222ENST00000523323 UNC13AQ9UPW8 1703 aa25.82■■□□□ 1.72
ITGB2-222ENST00000523323 WIZO95785 1651 aa25.68■■□□□ 1.7
ITGB2-222ENST00000523323 BICRAQ9NZM4 1560 aa25.52■■□□□ 1.68
ITGB2-222ENST00000523323 LOC105371045A0A1W2PR82 267 aa25.46■■□□□ 1.67
ITGB2-222ENST00000523323 BAZ1AQ9NRL2 1556 aaPredicted RBP25.41■■□□□ 1.66
ITGB2-222ENST00000523323 SMARCA4P51532 1647 aa25.35■■□□□ 1.65
ITGB2-222ENST00000523323 FAM9AQ8IZU1 332 aaPredicted RBP25.33■■□□□ 1.65
ITGB2-222ENST00000523323 EHMT2Q96KQ7 1210 aa25.33■■□□□ 1.65
ITGB2-222ENST00000523323 TRIM41Q8WV44 630 aa25.3■■□□□ 1.64
ITGB2-222ENST00000523323 CCDC88BA6NC98 1476 aa25.1■■□□□ 1.61
ITGB2-222ENST00000523323 TOP2AP11388 1531 aaKnown RBP25.09■■□□□ 1.61
ITGB2-222ENST00000523323 SMARCA2P51531 1590 aa25.01■■□□□ 1.59
ITGB2-222ENST00000523323 ABCC8Q09428 1581 aa24.96■■□□□ 1.59
ITGB2-222ENST00000523323 EIF4G1Q04637 1599 aaKnown RBP24.9■■□□□ 1.58
ITGB2-222ENST00000523323 ATAD2BQ9ULI0 1458 aa24.89■■□□□ 1.57
ITGB2-222ENST00000523323 BAZ1BQ9UIG0 1483 aaKnown RBP24.79■■□□□ 1.56
ITGB2-222ENST00000523323 PEG3Q9GZU2 1588 aa24.75■■□□□ 1.55
ITGB2-222ENST00000523323 PCGF6Q9BYE7 350 aa24.73■■□□□ 1.55
ITGB2-222ENST00000523323 SOGA1O94964 1423 aa24.58■■□□□ 1.53
ITGB2-222ENST00000523323 RUSC2Q8N2Y8 1516 aa24.55■■□□□ 1.52
ITGB2-222ENST00000523323 PPARGC1BQ86YN6 1023 aaKnown RBP24.52■■□□□ 1.52
ITGB2-222ENST00000523323 WRNQ14191 1432 aaPredicted RBP eCLIP24.45■■□□□ 1.5
ITGB2-222ENST00000523323 NCAPD3P42695 1498 aa24.42■■□□□ 1.5
ITGB2-222ENST00000523323 SYNJ1O43426 1573 aa24.42■■□□□ 1.5
ITGB2-222ENST00000523323 HMGXB3Q12766 1538 aa24.31■■□□□ 1.48
ITGB2-222ENST00000523323 CC2D2AQ9P2K1 1620 aa24.3■■□□□ 1.48
ITGB2-222ENST00000523323 TTBK1Q5TCY1 1321 aaPredicted RBP24.29■■□□□ 1.48
ITGB2-222ENST00000523323 CSRNP3Q8WYN3 585 aa24.27■■□□□ 1.48
ITGB2-222ENST00000523323 PELP1Q8IZL8 1130 aaKnown RBP24.26■■□□□ 1.47
ITGB2-222ENST00000523323 DNAJC5BQ9UF47 199 aa24.26■■□□□ 1.47
ITGB2-222ENST00000523323 UBTFP17480 764 aaKnown RBP24.24■■□□□ 1.47
ITGB2-222ENST00000523323 RANGAP1P46060 587 aaPredicted RBP24.23■■□□□ 1.47
ITGB2-222ENST00000523323 TRIM26Q12899 539 aaPredicted RBP24.16■■□□□ 1.46
ITGB2-222ENST00000523323 CFTRP13569 1480 aa24.09■■□□□ 1.45
ITGB2-222ENST00000523323 HRCP23327 699 aa24.07■■□□□ 1.44
ITGB2-222ENST00000523323 CUX1P39880 1505 aa24.06■■□□□ 1.44
ITGB2-222ENST00000523323 CEP162Q5TB80 1403 aa24.06■■□□□ 1.44
ITGB2-222ENST00000523323 TOP2BQ02880 1626 aa24.03■■□□□ 1.44
ITGB2-222ENST00000523323 NESP48681 1621 aa24.01■■□□□ 1.43
ITGB2-222ENST00000523323 CADPSQ9ULU8 1353 aa23.98■■□□□ 1.43
ITGB2-222ENST00000523323 EEA1Q15075 1411 aa23.97■■□□□ 1.43
ITGB2-222ENST00000523323 RAPGEF2Q9Y4G8 1499 aa23.97■■□□□ 1.43
ITGB2-222ENST00000523323 TNIKQ9UKE5 1360 aa23.95■■□□□ 1.42
ITGB2-222ENST00000523323 GOLGA3Q08378 1498 aa23.94■■□□□ 1.42
ITGB2-222ENST00000523323 BIVM-ERCC5R4GMW8 1640 aa23.91■■□□□ 1.42
ITGB2-222ENST00000523323 CEP164Q9UPV0 1460 aa23.85■■□□□ 1.41
ITGB2-222ENST00000523323 FANCD2Q9BXW9 1451 aa23.79■■□□□ 1.4
ITGB2-222ENST00000523323 KIF21BO75037 1637 aa23.77■■□□□ 1.4
ITGB2-222ENST00000523323 FGD5Q6ZNL6 1462 aa23.74■■□□□ 1.39
ITGB2-222ENST00000523323 CLIP1P30622 1438 aa23.74■■□□□ 1.39
ITGB2-222ENST00000523323 PRDM2Q13029 1718 aa23.73■■□□□ 1.39
ITGB2-222ENST00000523323 CUX2O14529 1486 aa23.73■■□□□ 1.39
ITGB2-222ENST00000523323 KIF27Q86VH2 1401 aa23.7■■□□□ 1.38
ITGB2-222ENST00000523323 RAD54L2Q9Y4B4 1467 aa23.69■■□□□ 1.38
ITGB2-222ENST00000523323 PRXQ9BXM0 1461 aa23.65■■□□□ 1.38
ITGB2-222ENST00000523323 MYT1Q01538 1121 aa23.61■■□□□ 1.37
ITGB2-222ENST00000523323 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.61■■□□□ 1.37
ITGB2-222ENST00000523323 IGF1RP08069 1367 aa23.58■■□□□ 1.37
ITGB2-222ENST00000523323 TOPBP1Q92547 1522 aa23.56■■□□□ 1.36
ITGB2-222ENST00000523323 POLA1P09884 1462 aaPredicted RBP23.53■■□□□ 1.36
ITGB2-222ENST00000523323 URB2Q14146 1524 aaKnown RBP23.52■■□□□ 1.36
ITGB2-222ENST00000523323 P3H3Q8IVL6 736 aa23.48■■□□□ 1.35
ITGB2-222ENST00000523323 VPS8Q8N3P4 1428 aa23.48■■□□□ 1.35
ITGB2-222ENST00000523323 DNMBPQ6XZF7 1577 aa23.47■■□□□ 1.35
ITGB2-222ENST00000523323 ERICH3Q5RHP9 1530 aa23.47■■□□□ 1.35
ITGB2-222ENST00000523323 CARMIL1Q5VZK9 1371 aa23.47■■□□□ 1.35
ITGB2-222ENST00000523323 TDRD9Q8NDG6 1382 aaKnown RBP23.47■■□□□ 1.35
ITGB2-222ENST00000523323 KIF21AQ7Z4S6 1674 aa23.45■■□□□ 1.35
ITGB2-222ENST00000523323 ARAP1Q96P48 1450 aa23.45■■□□□ 1.34
ITGB2-222ENST00000523323 LAMC3Q9Y6N6 1575 aa23.44■■□□□ 1.34
ITGB2-222ENST00000523323 HNRNPUL2Q1KMD3 747 aaKnown RBP23.42■■□□□ 1.34
ITGB2-222ENST00000523323 APLP2Q06481 763 aa23.41■■□□□ 1.34
ITGB2-222ENST00000523323 KANK4Q5T7N3 995 aaPredicted RBP23.4■■□□□ 1.34
ITGB2-222ENST00000523323 PDS5BQ9NTI5 1447 aa23.37■■□□□ 1.33
ITGB2-222ENST00000523323 CCER1Q8TC90 406 aaPredicted RBP23.36■■□□□ 1.33
ITGB2-222ENST00000523323 ARHGAP35Q9NRY4 1499 aa23.35■■□□□ 1.33
ITGB2-222ENST00000523323 ABCA10Q8WWZ4 1543 aa23.32■■□□□ 1.32
ITGB2-222ENST00000523323 ATP1B4Q9UN42 357 aaPredicted RBP23.29■■□□□ 1.32
ITGB2-222ENST00000523323 AQRO60306 1485 aaKnown RBP eCLIP23.2■■□□□ 1.3
ITGB2-222ENST00000523323 GAPVD1Q14C86 1478 aa23.17■■□□□ 1.3
ITGB2-222ENST00000523323 FHOD3Q2V2M9 1422 aa23.16■■□□□ 1.3
ITGB2-222ENST00000523323 WDR97A6NE52 1622 aa23.15■■□□□ 1.3
ITGB2-222ENST00000523323 ITGAEP38570 1179 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms