RNA–Protein interactions for RNA: ENST00000549258.5

SLC38A2-208, Transcript of solute carrier family 38 member 2, humanhuman

TSL 2

Gene SLC38A2, Length 4,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A2-208ENST00000549258 NISCHQ9Y2I1 1504 aa8.36□□□□□ -1.07
SLC38A2-208ENST00000549258 PELP1Q8IZL8 1130 aaKnown RBP7.4□□□□□ -1.22
SLC38A2-208ENST00000549258 MYT1Q01538 1121 aa7.39□□□□□ -1.23
SLC38A2-208ENST00000549258 SLC24A1O60721 1099 aa7.34□□□□□ -1.23
SLC38A2-208ENST00000549258 CCDC180Q9P1Z9 1646 aa7.16□□□□□ -1.26
SLC38A2-208ENST00000549258 TTBK1Q5TCY1 1321 aaPredicted RBP7.16□□□□□ -1.26
SLC38A2-208ENST00000549258 ABCC9O60706 1549 aa7.16□□□□□ -1.26
SLC38A2-208ENST00000549258 PRKCSHP14314 528 aaPredicted RBP7.11□□□□□ -1.27
SLC38A2-208ENST00000549258 UNC13AQ9UPW8 1703 aa7.01□□□□□ -1.29
SLC38A2-208ENST00000549258 ZCCHC6Q5VYS8 1495 aaKnown RBP7.01□□□□□ -1.29
SLC38A2-208ENST00000549258 ERICH6Q7L0X2 663 aa7.01□□□□□ -1.29
SLC38A2-208ENST00000549258 SHROOM4Q9ULL8 1493 aa6.99□□□□□ -1.29
SLC38A2-208ENST00000549258 DCAF8L2P0C7V8 631 aa6.92□□□□□ -1.3
SLC38A2-208ENST00000549258 APLP2Q06481 763 aa6.91□□□□□ -1.3
SLC38A2-208ENST00000549258 DNAJC5BQ9UF47 199 aa6.9□□□□□ -1.3
SLC38A2-208ENST00000549258 BICRAQ9NZM4 1560 aa6.86□□□□□ -1.31
SLC38A2-208ENST00000549258 SCRIBQ14160 1630 aa6.86□□□□□ -1.31
SLC38A2-208ENST00000549258 DAXXQ9UER7 740 aaPredicted RBP6.86□□□□□ -1.31
SLC38A2-208ENST00000549258 PABPN1Q86U42 306 aaKnown RBP eCLIP6.81□□□□□ -1.32
SLC38A2-208ENST00000549258 CECR2Q9BXF3 1484 aa6.78□□□□□ -1.32
SLC38A2-208ENST00000549258 BCL11AQ9H165 835 aa6.73□□□□□ -1.33
SLC38A2-208ENST00000549258 DCAF1Q9Y4B6 1507 aa6.7□□□□□ -1.34
SLC38A2-208ENST00000549258 EIF5BO60841 1220 aaKnown RBP6.65□□□□□ -1.34
SLC38A2-208ENST00000549258 MROH2BQ7Z745 1585 aa6.64□□□□□ -1.35
SLC38A2-208ENST00000549258 NACADO15069 1562 aa6.64□□□□□ -1.35
SLC38A2-208ENST00000549258 WIZO95785 1651 aa6.62□□□□□ -1.35
SLC38A2-208ENST00000549258 RB1CC1Q8TDY2 1594 aa6.62□□□□□ -1.35
SLC38A2-208ENST00000549258 MYO15BQ96JP2 1530 aa6.6□□□□□ -1.35
SLC38A2-208ENST00000549258 AEBP2Q6ZN18 517 aaPredicted RBP6.6□□□□□ -1.35
SLC38A2-208ENST00000549258 FAM9AQ8IZU1 332 aaPredicted RBP6.6□□□□□ -1.35
SLC38A2-208ENST00000549258 RSF1Q96T23 1441 aaPredicted RBP6.53□□□□□ -1.36
SLC38A2-208ENST00000549258 SUPT5HO00267 1087 aaKnown RBP6.49□□□□□ -1.37
SLC38A2-208ENST00000549258 PLEKHG5O94827 1062 aa6.49□□□□□ -1.37
SLC38A2-208ENST00000549258 EIF4G1Q04637 1599 aaKnown RBP6.48□□□□□ -1.37
SLC38A2-208ENST00000549258 CHIC1Q5VXU3 224 aa6.48□□□□□ -1.37
SLC38A2-208ENST00000549258 SMARCA4P51532 1647 aa6.47□□□□□ -1.37
SLC38A2-208ENST00000549258 CC2D2AQ9P2K1 1620 aa6.46□□□□□ -1.38
SLC38A2-208ENST00000549258 EHMT2Q96KQ7 1210 aa6.46□□□□□ -1.38
SLC38A2-208ENST00000549258 NCBP3Q53F19 620 aaKnown RBP6.45□□□□□ -1.38
SLC38A2-208ENST00000549258 PLPPR3Q6T4P5 718 aa6.43□□□□□ -1.38
SLC38A2-208ENST00000549258 SCAF1Q9H7N4 1312 aaKnown RBP6.43□□□□□ -1.38
SLC38A2-208ENST00000549258 NESP48681 1621 aa6.42□□□□□ -1.38
SLC38A2-208ENST00000549258 SRCAPQ6ZRS2 3230 aa6.41□□□□□ -1.38
SLC38A2-208ENST00000549258 CENPBP07199 599 aaPredicted RBP6.39□□□□□ -1.39
SLC38A2-208ENST00000549258 RTN4Q9NQC3 1192 aaKnown RBP6.39□□□□□ -1.39
SLC38A2-208ENST00000549258 ATAD2BQ9ULI0 1458 aa6.38□□□□□ -1.39
SLC38A2-208ENST00000549258 RANGAP1P46060 587 aaPredicted RBP6.38□□□□□ -1.39
SLC38A2-208ENST00000549258 PODXL2Q9NZ53 605 aa6.36□□□□□ -1.39
SLC38A2-208ENST00000549258 SMARCA2P51531 1590 aa6.36□□□□□ -1.39
SLC38A2-208ENST00000549258 HRCP23327 699 aa6.35□□□□□ -1.39
SLC38A2-208ENST00000549258 CCDC88BA6NC98 1476 aa6.35□□□□□ -1.39
SLC38A2-208ENST00000549258 PEG3Q9GZU2 1588 aa6.34□□□□□ -1.39
SLC38A2-208ENST00000549258 ABCC8Q09428 1581 aa6.34□□□□□ -1.39
SLC38A2-208ENST00000549258 KLHL34Q8N239 644 aa6.33□□□□□ -1.4
SLC38A2-208ENST00000549258 GOLGB1Q14789 3259 aaKnown RBP6.33□□□□□ -1.4
SLC38A2-208ENST00000549258 BAZ1AQ9NRL2 1556 aaPredicted RBP6.32□□□□□ -1.4
SLC38A2-208ENST00000549258 UTRNP46939 3433 aa6.32□□□□□ -1.4
SLC38A2-208ENST00000549258 RUSC2Q8N2Y8 1516 aa6.29□□□□□ -1.4
SLC38A2-208ENST00000549258 ARXQ96QS3 562 aa6.29□□□□□ -1.4
SLC38A2-208ENST00000549258 TIMELESSQ9UNS1 1208 aa6.29□□□□□ -1.4
SLC38A2-208ENST00000549258 KIF21AQ7Z4S6 1674 aa6.26□□□□□ -1.41
SLC38A2-208ENST00000549258 TOP2AP11388 1531 aaKnown RBP6.25□□□□□ -1.41
SLC38A2-208ENST00000549258 UBE2Q2Q8WVN8 375 aa6.25□□□□□ -1.41
SLC38A2-208ENST00000549258 NCAPD3P42695 1498 aa6.24□□□□□ -1.41
SLC38A2-208ENST00000549258 SYNJ1O43426 1573 aa6.23□□□□□ -1.41
SLC38A2-208ENST00000549258 ANO8Q9HCE9 1232 aaPredicted RBP6.21□□□□□ -1.41
SLC38A2-208ENST00000549258 TULP1O00294 542 aaPredicted RBP6.21□□□□□ -1.42
SLC38A2-208ENST00000549258 BAZ1BQ9UIG0 1483 aaKnown RBP6.2□□□□□ -1.42
SLC38A2-208ENST00000549258 PKNOX2Q96KN3 472 aa6.2□□□□□ -1.42
SLC38A2-208ENST00000549258 PPARGC1BQ86YN6 1023 aaKnown RBP6.18□□□□□ -1.42
SLC38A2-208ENST00000549258 ANP32EQ9BTT0 268 aa6.18□□□□□ -1.42
SLC38A2-208ENST00000549258 HMGXB3Q12766 1538 aa6.17□□□□□ -1.42
SLC38A2-208ENST00000549258 CUX1P39880 1505 aa6.17□□□□□ -1.42
SLC38A2-208ENST00000549258 LOC105371045A0A1W2PR82 267 aa6.15□□□□□ -1.42
SLC38A2-208ENST00000549258 URB2Q14146 1524 aaKnown RBP6.15□□□□□ -1.42
SLC38A2-208ENST00000549258 SOGA1O94964 1423 aa6.15□□□□□ -1.42
SLC38A2-208ENST00000549258 PDIA4P13667 645 aaKnown RBP6.15□□□□□ -1.42
SLC38A2-208ENST00000549258 CFTRP13569 1480 aa6.13□□□□□ -1.43
SLC38A2-208ENST00000549258 CSRNP3Q8WYN3 585 aa6.13□□□□□ -1.43
SLC38A2-208ENST00000549258 HOMEZQ8IX15 550 aa6.12□□□□□ -1.43
SLC38A2-208ENST00000549258 RAD54L2Q9Y4B4 1467 aa6.12□□□□□ -1.43
SLC38A2-208ENST00000549258 PDE4CQ08493 712 aa6.12□□□□□ -1.43
SLC38A2-208ENST00000549258 ZNF608Q9ULD9 1512 aaPredicted RBP6.12□□□□□ -1.43
SLC38A2-208ENST00000549258 NEFLP07196 543 aa6.11□□□□□ -1.43
SLC38A2-208ENST00000549258 THOC2Q8NI27 1593 aaKnown RBP6.11□□□□□ -1.43
SLC38A2-208ENST00000549258 CUX2O14529 1486 aa6.1□□□□□ -1.43
SLC38A2-208ENST00000549258 GTF3C3Q9Y5Q9 886 aa6.09□□□□□ -1.43
SLC38A2-208ENST00000549258 PRDM2Q13029 1718 aa6.07□□□□□ -1.44
SLC38A2-208ENST00000549258 ACIN1Q9UKV3 1341 aaKnown RBP6.07□□□□□ -1.44
SLC38A2-208ENST00000549258 AMER1Q5JTC6 1135 aaPredicted RBP6.06□□□□□ -1.44
SLC38A2-208ENST00000549258 CADPSQ9ULU8 1353 aa6.06□□□□□ -1.44
SLC38A2-208ENST00000549258 CCDC136Q96JN2 1154 aa6.06□□□□□ -1.44
SLC38A2-208ENST00000549258 TARBP1Q13395 1621 aaKnown RBP6.05□□□□□ -1.44
SLC38A2-208ENST00000549258 FANCD2Q9BXW9 1451 aa6.05□□□□□ -1.44
SLC38A2-208ENST00000549258 WDR97A6NE52 1622 aa6.04□□□□□ -1.44
SLC38A2-208ENST00000549258 POLA1P09884 1462 aaPredicted RBP6.03□□□□□ -1.44
SLC38A2-208ENST00000549258 NPM2Q86SE8 214 aaKnown RBP6.02□□□□□ -1.45
SLC38A2-208ENST00000549258 BIVM-ERCC5R4GMW8 1640 aa6.02□□□□□ -1.45
SLC38A2-208ENST00000549258 TOPBP1Q92547 1522 aa6.02□□□□□ -1.45
SLC38A2-208ENST00000549258 AQRO60306 1485 aaKnown RBP eCLIP6.02□□□□□ -1.456e-8■■■■■ 28.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms