RNA–Protein interactions for RNA: ENST00000397850.6

ITGB2-205, Transcript of integrin subunit beta 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ITGB2, Length 3,178 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB2-205ENST00000397850 NISCHQ9Y2I1 1504 aa27.3■■□□□ 1.96
ITGB2-205ENST00000397850 SHROOM4Q9ULL8 1493 aa24.27■■□□□ 1.48
ITGB2-205ENST00000397850 SUPT5HO00267 1087 aaKnown RBP23.93■■□□□ 1.42
ITGB2-205ENST00000397850 DCAF8L2P0C7V8 631 aa23.71■■□□□ 1.39
ITGB2-205ENST00000397850 ZCCHC6Q5VYS8 1495 aaKnown RBP23.03■■□□□ 1.28
ITGB2-205ENST00000397850 CHIC1Q5VXU3 224 aa22.95■■□□□ 1.26
ITGB2-205ENST00000397850 MYO15BQ96JP2 1530 aa22.81■■□□□ 1.24
ITGB2-205ENST00000397850 PCGF6Q9BYE7 350 aa22.74■■□□□ 1.23
ITGB2-205ENST00000397850 CCDC180Q9P1Z9 1646 aa22.72■■□□□ 1.23
ITGB2-205ENST00000397850 LOC105371045A0A1W2PR82 267 aa22.61■■□□□ 1.21
ITGB2-205ENST00000397850 HRCP23327 699 aa22.5■■□□□ 1.19
ITGB2-205ENST00000397850 PPARGC1BQ86YN6 1023 aaKnown RBP22.43■■□□□ 1.18
ITGB2-205ENST00000397850 EHMT2Q96KQ7 1210 aa22.38■■□□□ 1.17
ITGB2-205ENST00000397850 FAM9AQ8IZU1 332 aaPredicted RBP22.25■■□□□ 1.15
ITGB2-205ENST00000397850 TRIM41Q8WV44 630 aa22.04■■□□□ 1.12
ITGB2-205ENST00000397850 DCAF1Q9Y4B6 1507 aa22■■□□□ 1.11
ITGB2-205ENST00000397850 SCRIBQ14160 1630 aa21.96■■□□□ 1.11
ITGB2-205ENST00000397850 TRIM26Q12899 539 aaPredicted RBP21.91■■□□□ 1.1
ITGB2-205ENST00000397850 RSF1Q96T23 1441 aaPredicted RBP21.84■■□□□ 1.09
ITGB2-205ENST00000397850 ABCC9O60706 1549 aa21.77■■□□□ 1.08
ITGB2-205ENST00000397850 RB1CC1Q8TDY2 1594 aa21.63■■□□□ 1.05
ITGB2-205ENST00000397850 TTBK1Q5TCY1 1321 aaPredicted RBP21.62■■□□□ 1.05
ITGB2-205ENST00000397850 CECR2Q9BXF3 1484 aa21.59■■□□□ 1.05
ITGB2-205ENST00000397850 MROH2BQ7Z745 1585 aa21.4■■□□□ 1.02
ITGB2-205ENST00000397850 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.36■■□□□ 1.01
ITGB2-205ENST00000397850 ZEB1P37275 1124 aaPredicted RBP21.35■■□□□ 1.01
ITGB2-205ENST00000397850 WIZO95785 1651 aa21.28■■□□□ 1
ITGB2-205ENST00000397850 CCER1Q8TC90 406 aaPredicted RBP21.24■□□□□ 0.99
ITGB2-205ENST00000397850 NACADO15069 1562 aa21.18■□□□□ 0.98
ITGB2-205ENST00000397850 PABPN1Q86U42 306 aaKnown RBP eCLIP21.16■□□□□ 0.98
ITGB2-205ENST00000397850 UBTFP17480 764 aaKnown RBP21.1■□□□□ 0.97
ITGB2-205ENST00000397850 RANGAP1P46060 587 aaPredicted RBP21.06■□□□□ 0.96
ITGB2-205ENST00000397850 ABCC8Q09428 1581 aa21.04■□□□□ 0.96
ITGB2-205ENST00000397850 SCAF1Q9H7N4 1312 aaKnown RBP20.98■□□□□ 0.95
ITGB2-205ENST00000397850 CCDC88BA6NC98 1476 aa20.98■□□□□ 0.95
ITGB2-205ENST00000397850 SOGA1O94964 1423 aa20.94■□□□□ 0.94
ITGB2-205ENST00000397850 BAZ1AQ9NRL2 1556 aaPredicted RBP20.9■□□□□ 0.94
ITGB2-205ENST00000397850 CSRNP3Q8WYN3 585 aa20.86■□□□□ 0.93
ITGB2-205ENST00000397850 RUSC2Q8N2Y8 1516 aa20.84■□□□□ 0.93
ITGB2-205ENST00000397850 HNRNPUL2Q1KMD3 747 aaKnown RBP20.83■□□□□ 0.92
ITGB2-205ENST00000397850 CEP162Q5TB80 1403 aa20.82■□□□□ 0.92
ITGB2-205ENST00000397850 DIEXFQ68CQ4 756 aaKnown RBP20.81■□□□□ 0.92
ITGB2-205ENST00000397850 NEUROD1Q13562 356 aa20.74■□□□□ 0.91
ITGB2-205ENST00000397850 TOP2AP11388 1531 aaKnown RBP20.73■□□□□ 0.91
ITGB2-205ENST00000397850 SMARCA4P51532 1647 aa20.71■□□□□ 0.91
ITGB2-205ENST00000397850 YTHDC1Q96MU7 727 aaKnown RBP20.71■□□□□ 0.91
ITGB2-205ENST00000397850 SMARCA2P51531 1590 aa20.69■□□□□ 0.9
ITGB2-205ENST00000397850 EIF4G1Q04637 1599 aaKnown RBP20.67■□□□□ 0.9
ITGB2-205ENST00000397850 TNIKQ9UKE5 1360 aa20.64■□□□□ 0.89
ITGB2-205ENST00000397850 ACIN1Q9UKV3 1341 aaKnown RBP20.63■□□□□ 0.89
ITGB2-205ENST00000397850 APLP2Q06481 763 aa20.6■□□□□ 0.89
ITGB2-205ENST00000397850 GTF3C3Q9Y5Q9 886 aa20.59■□□□□ 0.89
ITGB2-205ENST00000397850 WRNQ14191 1432 aaPredicted RBP eCLIP20.56■□□□□ 0.88
ITGB2-205ENST00000397850 PELP1Q8IZL8 1130 aaKnown RBP20.56■□□□□ 0.88
ITGB2-205ENST00000397850 CENPBP07199 599 aaPredicted RBP20.52■□□□□ 0.87
ITGB2-205ENST00000397850 UNC13AQ9UPW8 1703 aa20.5■□□□□ 0.87
ITGB2-205ENST00000397850 ZNF316A6NFI3 1004 aaPredicted RBP20.5■□□□□ 0.87
ITGB2-205ENST00000397850 GOLGA3Q08378 1498 aa20.49■□□□□ 0.87
ITGB2-205ENST00000397850 CLIP1P30622 1438 aa20.43■□□□□ 0.86
ITGB2-205ENST00000397850 EEA1Q15075 1411 aa20.42■□□□□ 0.86
ITGB2-205ENST00000397850 MIER1Q8N108 512 aa20.38■□□□□ 0.85
ITGB2-205ENST00000397850 ITGAEP38570 1179 aa20.36■□□□□ 0.85
ITGB2-205ENST00000397850 SYNJ1O43426 1573 aa20.35■□□□□ 0.85
ITGB2-205ENST00000397850 BICRAQ9NZM4 1560 aa20.34■□□□□ 0.85
ITGB2-205ENST00000397850 RAPGEF2Q9Y4G8 1499 aa20.33■□□□□ 0.85
ITGB2-205ENST00000397850 CEP164Q9UPV0 1460 aa20.32■□□□□ 0.84
ITGB2-205ENST00000397850 BAZ1BQ9UIG0 1483 aaKnown RBP20.31■□□□□ 0.84
ITGB2-205ENST00000397850 ATAD2BQ9ULI0 1458 aa20.28■□□□□ 0.84
ITGB2-205ENST00000397850 KANK4Q5T7N3 995 aaPredicted RBP20.23■□□□□ 0.83
ITGB2-205ENST00000397850 VPS8Q8N3P4 1428 aa20.21■□□□□ 0.83
ITGB2-205ENST00000397850 ATP1B4Q9UN42 357 aaPredicted RBP20.14■□□□□ 0.82
ITGB2-205ENST00000397850 KIF21BO75037 1637 aa20.08■□□□□ 0.81
ITGB2-205ENST00000397850 P3H3Q8IVL6 736 aa20.05■□□□□ 0.8
ITGB2-205ENST00000397850 PEG3Q9GZU2 1588 aa20.03■□□□□ 0.8
ITGB2-205ENST00000397850 DHX57Q6P158 1386 aaKnown RBP19.95■□□□□ 0.78
ITGB2-205ENST00000397850 MYT1Q01538 1121 aa19.93■□□□□ 0.78
ITGB2-205ENST00000397850 ARAP1Q96P48 1450 aa19.93■□□□□ 0.78
ITGB2-205ENST00000397850 FAM50AQ14320 339 aaKnown RBP19.93■□□□□ 0.78
ITGB2-205ENST00000397850 TOP2BQ02880 1626 aa19.91■□□□□ 0.78
ITGB2-205ENST00000397850 KIF27Q86VH2 1401 aa19.89■□□□□ 0.78
ITGB2-205ENST00000397850 PRXQ9BXM0 1461 aa19.87■□□□□ 0.77
ITGB2-205ENST00000397850 HIRIP3Q9BW71 556 aaPredicted RBP19.86■□□□□ 0.77
ITGB2-205ENST00000397850 CUX1P39880 1505 aa19.86■□□□□ 0.77
ITGB2-205ENST00000397850 KCNH8Q96L42 1107 aa19.83■□□□□ 0.77
ITGB2-205ENST00000397850 SIN3AQ96ST3 1273 aa19.81■□□□□ 0.76
ITGB2-205ENST00000397850 CCNB3Q8WWL7 1395 aa19.81■□□□□ 0.76
ITGB2-205ENST00000397850 CUX2O14529 1486 aa19.79■□□□□ 0.76
ITGB2-205ENST00000397850 ARHGAP35Q9NRY4 1499 aa19.75■□□□□ 0.75
ITGB2-205ENST00000397850 DDX10Q13206 875 aaKnown RBP19.74■□□□□ 0.75
ITGB2-205ENST00000397850 RAB3GAP2Q9H2M9 1393 aa19.72■□□□□ 0.75
ITGB2-205ENST00000397850 NCAPD3P42695 1498 aa19.72■□□□□ 0.75
ITGB2-205ENST00000397850 BCANQ96GW7 911 aa19.72■□□□□ 0.75
ITGB2-205ENST00000397850 IGF1RP08069 1367 aa19.71■□□□□ 0.75
ITGB2-205ENST00000397850 ERICH3Q5RHP9 1530 aa19.71■□□□□ 0.75
ITGB2-205ENST00000397850 BIVM-ERCC5R4GMW8 1640 aa19.71■□□□□ 0.75
ITGB2-205ENST00000397850 CLSPNQ9HAW4 1339 aa19.7■□□□□ 0.74
ITGB2-205ENST00000397850 CARMIL1Q5VZK9 1371 aa19.69■□□□□ 0.74
ITGB2-205ENST00000397850 CFTRP13569 1480 aa19.66■□□□□ 0.74
ITGB2-205ENST00000397850 RRBP1Q9P2E9 1410 aaKnown RBP19.66■□□□□ 0.74
ITGB2-205ENST00000397850 SUPT16HQ9Y5B9 1047 aaKnown RBP19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms