RNA–Protein interactions for RNA: ENST00000460338.5

KDELC1-202, Transcript of KDEL motif containing 1, humanhuman

TSL 5

Gene KDELC1, Length 2,083 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDELC1-202ENST00000460338 NISCHQ9Y2I1 1504 aa40.4■■■■■ 4.06
KDELC1-202ENST00000460338 CCDC180Q9P1Z9 1646 aa35.29■■■■□ 3.24
KDELC1-202ENST00000460338 ZCCHC6Q5VYS8 1495 aaKnown RBP33.9■■■■□ 3.02
KDELC1-202ENST00000460338 ABCC9O60706 1549 aa33.48■■■□□ 2.95
KDELC1-202ENST00000460338 DCAF8L2P0C7V8 631 aa33.44■■■□□ 2.94
KDELC1-202ENST00000460338 DCAF1Q9Y4B6 1507 aa33.4■■■□□ 2.94
KDELC1-202ENST00000460338 MYO15BQ96JP2 1530 aa33.05■■■□□ 2.88
KDELC1-202ENST00000460338 NACADO15069 1562 aa32.9■■■□□ 2.86
KDELC1-202ENST00000460338 SHROOM4Q9ULL8 1493 aa32.87■■■□□ 2.85
KDELC1-202ENST00000460338 RB1CC1Q8TDY2 1594 aa32.66■■■□□ 2.82
KDELC1-202ENST00000460338 SCRIBQ14160 1630 aa32.44■■■□□ 2.78
KDELC1-202ENST00000460338 UNC13AQ9UPW8 1703 aa32.01■■■□□ 2.71
KDELC1-202ENST00000460338 BICRAQ9NZM4 1560 aa31.65■■■□□ 2.66
KDELC1-202ENST00000460338 SUPT5HO00267 1087 aaKnown RBP31.58■■■□□ 2.65
KDELC1-202ENST00000460338 PABPN1Q86U42 306 aaKnown RBP eCLIP31.55■■■□□ 2.64
KDELC1-202ENST00000460338 CECR2Q9BXF3 1484 aa31.39■■■□□ 2.62
KDELC1-202ENST00000460338 RSF1Q96T23 1441 aaPredicted RBP31.29■■■□□ 2.6
KDELC1-202ENST00000460338 BAZ1AQ9NRL2 1556 aaPredicted RBP31.21■■■□□ 2.59
KDELC1-202ENST00000460338 MROH2BQ7Z745 1585 aa31.2■■■□□ 2.58
KDELC1-202ENST00000460338 SMARCA4P51532 1647 aa31.08■■■□□ 2.57
KDELC1-202ENST00000460338 WIZO95785 1651 aa30.95■■■□□ 2.54
KDELC1-202ENST00000460338 EIF4G1Q04637 1599 aaKnown RBP30.72■■■□□ 2.51
KDELC1-202ENST00000460338 PEG3Q9GZU2 1588 aa30.71■■■□□ 2.51
KDELC1-202ENST00000460338 TOP2AP11388 1531 aaKnown RBP30.62■■■□□ 2.49
KDELC1-202ENST00000460338 ATAD2BQ9ULI0 1458 aa30.6■■■□□ 2.49
KDELC1-202ENST00000460338 SMARCA2P51531 1590 aa30.6■■■□□ 2.49
KDELC1-202ENST00000460338 BAZ1BQ9UIG0 1483 aaKnown RBP30.43■■■□□ 2.46
KDELC1-202ENST00000460338 NCAPD3P42695 1498 aa30.36■■■□□ 2.45
KDELC1-202ENST00000460338 HMGXB3Q12766 1538 aa30.31■■■□□ 2.44
KDELC1-202ENST00000460338 CCDC88BA6NC98 1476 aa30.31■■■□□ 2.44
KDELC1-202ENST00000460338 CC2D2AQ9P2K1 1620 aa30.3■■■□□ 2.44
KDELC1-202ENST00000460338 CHIC1Q5VXU3 224 aa30.15■■■□□ 2.42
KDELC1-202ENST00000460338 TRIM41Q8WV44 630 aa29.72■■■□□ 2.35
KDELC1-202ENST00000460338 CFTRP13569 1480 aa29.66■■■□□ 2.34
KDELC1-202ENST00000460338 ABCC8Q09428 1581 aa29.64■■■□□ 2.33
KDELC1-202ENST00000460338 DNAJC5BQ9UF47 199 aa29.62■■■□□ 2.33
KDELC1-202ENST00000460338 CADPSQ9ULU8 1353 aa29.58■■■□□ 2.33
KDELC1-202ENST00000460338 PRDM2Q13029 1718 aa29.52■■■□□ 2.32
KDELC1-202ENST00000460338 WRNQ14191 1432 aaPredicted RBP eCLIP29.47■■■□□ 2.31
KDELC1-202ENST00000460338 LAMC3Q9Y6N6 1575 aa29.36■■■□□ 2.29
KDELC1-202ENST00000460338 NESP48681 1621 aa29.35■■■□□ 2.29
KDELC1-202ENST00000460338 SYNJ1O43426 1573 aa29.34■■■□□ 2.29
KDELC1-202ENST00000460338 FANCD2Q9BXW9 1451 aa29.26■■■□□ 2.27
KDELC1-202ENST00000460338 TOP2BQ02880 1626 aa29.25■■■□□ 2.27
KDELC1-202ENST00000460338 BIVM-ERCC5R4GMW8 1640 aa29.21■■■□□ 2.27
KDELC1-202ENST00000460338 CUX1P39880 1505 aa29.18■■■□□ 2.26
KDELC1-202ENST00000460338 FAM9AQ8IZU1 332 aaPredicted RBP29.16■■■□□ 2.26
KDELC1-202ENST00000460338 PDS5BQ9NTI5 1447 aa29.14■■■□□ 2.26
KDELC1-202ENST00000460338 CEP164Q9UPV0 1460 aa29.09■■■□□ 2.25
KDELC1-202ENST00000460338 SOGA1O94964 1423 aa29.05■■■□□ 2.24
KDELC1-202ENST00000460338 KIF21AQ7Z4S6 1674 aa29.01■■■□□ 2.24
KDELC1-202ENST00000460338 LOC105371045A0A1W2PR82 267 aa29■■■□□ 2.23
KDELC1-202ENST00000460338 EEA1Q15075 1411 aa28.98■■■□□ 2.23
KDELC1-202ENST00000460338 DNMBPQ6XZF7 1577 aa28.96■■■□□ 2.23
KDELC1-202ENST00000460338 RUSC2Q8N2Y8 1516 aa28.94■■■□□ 2.22
KDELC1-202ENST00000460338 TOPBP1Q92547 1522 aa28.92■■■□□ 2.22
KDELC1-202ENST00000460338 FGD5Q6ZNL6 1462 aa28.89■■■□□ 2.22
KDELC1-202ENST00000460338 URB2Q14146 1524 aaKnown RBP28.88■■■□□ 2.21
KDELC1-202ENST00000460338 CSRNP3Q8WYN3 585 aa28.84■■■□□ 2.21
KDELC1-202ENST00000460338 POLA1P09884 1462 aaPredicted RBP28.77■■■□□ 2.2
KDELC1-202ENST00000460338 MRC2Q9UBG0 1479 aa28.76■■■□□ 2.19
KDELC1-202ENST00000460338 EHMT2Q96KQ7 1210 aa28.75■■■□□ 2.19
KDELC1-202ENST00000460338 KIF27Q86VH2 1401 aa28.74■■■□□ 2.19
KDELC1-202ENST00000460338 ERCC6Q03468 1493 aa28.74■■■□□ 2.19
KDELC1-202ENST00000460338 CUX2O14529 1486 aa28.68■■■□□ 2.18
KDELC1-202ENST00000460338 RAD54L2Q9Y4B4 1467 aa28.67■■■□□ 2.18
KDELC1-202ENST00000460338 ABCA10Q8WWZ4 1543 aa28.64■■■□□ 2.17
KDELC1-202ENST00000460338 WDR62O43379 1518 aa28.61■■■□□ 2.17
KDELC1-202ENST00000460338 KIF21BO75037 1637 aa28.6■■■□□ 2.17
KDELC1-202ENST00000460338 GOLGA3Q08378 1498 aa28.57■■■□□ 2.16
KDELC1-202ENST00000460338 THOC2Q8NI27 1593 aaKnown RBP28.55■■■□□ 2.16
KDELC1-202ENST00000460338 WDR97A6NE52 1622 aa28.55■■■□□ 2.16
KDELC1-202ENST00000460338 PRXQ9BXM0 1461 aa28.5■■■□□ 2.15
KDELC1-202ENST00000460338 TARBP1Q13395 1621 aaKnown RBP28.5■■■□□ 2.15
KDELC1-202ENST00000460338 IGF1RP08069 1367 aa28.48■■■□□ 2.15
KDELC1-202ENST00000460338 UBTFP17480 764 aaKnown RBP28.48■■■□□ 2.15
KDELC1-202ENST00000460338 RAPGEF2Q9Y4G8 1499 aa28.47■■■□□ 2.15
KDELC1-202ENST00000460338 TNIKQ9UKE5 1360 aa28.45■■■□□ 2.15
KDELC1-202ENST00000460338 ERICH3Q5RHP9 1530 aa28.45■■■□□ 2.14
KDELC1-202ENST00000460338 TDRD9Q8NDG6 1382 aaKnown RBP28.41■■■□□ 2.14
KDELC1-202ENST00000460338 ABCA5Q8WWZ7 1642 aa28.41■■■□□ 2.14
KDELC1-202ENST00000460338 IFT140Q96RY7 1462 aa28.39■■■□□ 2.14
KDELC1-202ENST00000460338 GAPVD1Q14C86 1478 aa28.37■■■□□ 2.13
KDELC1-202ENST00000460338 CARMIL1Q5VZK9 1371 aa28.35■■■□□ 2.13
KDELC1-202ENST00000460338 CEP162Q5TB80 1403 aa28.3■■■□□ 2.12
KDELC1-202ENST00000460338 CUL7Q14999 1698 aa28.29■■■□□ 2.12
KDELC1-202ENST00000460338 AQRO60306 1485 aaKnown RBP eCLIP28.26■■■□□ 2.11
KDELC1-202ENST00000460338 ZNF608Q9ULD9 1512 aaPredicted RBP28.23■■■□□ 2.11
KDELC1-202ENST00000460338 PBRM1Q86U86 1689 aa28.22■■■□□ 2.11
KDELC1-202ENST00000460338 GRIN2BQ13224 1484 aa28.16■■■□□ 2.1
KDELC1-202ENST00000460338 EIF4G3O43432 1585 aaKnown RBP28.15■■■□□ 2.1
KDELC1-202ENST00000460338 CLIP1P30622 1438 aa28.12■■■□□ 2.09
KDELC1-202ENST00000460338 FHAD1B1AJZ9 1412 aa28.06■■■□□ 2.08
KDELC1-202ENST00000460338 RANGAP1P46060 587 aaPredicted RBP28.05■■■□□ 2.08
KDELC1-202ENST00000460338 ADAMTS12P58397 1594 aa28.04■■■□□ 2.08
KDELC1-202ENST00000460338 SNAPC4Q5SXM2 1469 aa27.99■■■□□ 2.07
KDELC1-202ENST00000460338 CTTNBP2Q8WZ74 1663 aa27.97■■■□□ 2.07
KDELC1-202ENST00000460338 MAGI1Q96QZ7 1491 aaPredicted RBP27.94■■■□□ 2.06
KDELC1-202ENST00000460338 ARHGAP35Q9NRY4 1499 aa27.86■■■□□ 2.05
KDELC1-202ENST00000460338 VPS8Q8N3P4 1428 aa27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms