RNA–Protein interactions for RNA: ENST00000498666.5

ITGB2-212, Transcript of integrin subunit beta 2, humanhuman

TSL 1 (best)

Gene ITGB2, Length 4,781 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB2-212ENST00000498666 NISCHQ9Y2I1 1504 aa23.49■■□□□ 1.35
ITGB2-212ENST00000498666 DCAF8L2P0C7V8 631 aa23.01■■□□□ 1.27
ITGB2-212ENST00000498666 SUPT5HO00267 1087 aaKnown RBP22.51■■□□□ 1.19
ITGB2-212ENST00000498666 SHROOM4Q9ULL8 1493 aa22.19■■□□□ 1.14
ITGB2-212ENST00000498666 EHMT2Q96KQ7 1210 aa21.37■■□□□ 1.01
ITGB2-212ENST00000498666 PCGF6Q9BYE7 350 aa21.36■■□□□ 1.01
ITGB2-212ENST00000498666 PELP1Q8IZL8 1130 aaKnown RBP21.12■□□□□ 0.97
ITGB2-212ENST00000498666 FAM9AQ8IZU1 332 aaPredicted RBP21.09■□□□□ 0.97
ITGB2-212ENST00000498666 APLP2Q06481 763 aa21.07■□□□□ 0.96
ITGB2-212ENST00000498666 ZEB1P37275 1124 aaPredicted RBP20.96■□□□□ 0.95
ITGB2-212ENST00000498666 TRIM41Q8WV44 630 aa20.89■□□□□ 0.93
ITGB2-212ENST00000498666 TTBK1Q5TCY1 1321 aaPredicted RBP20.72■□□□□ 0.91
ITGB2-212ENST00000498666 HRCP23327 699 aa20.7■□□□□ 0.9
ITGB2-212ENST00000498666 CCER1Q8TC90 406 aaPredicted RBP20.66■□□□□ 0.9
ITGB2-212ENST00000498666 CENPBP07199 599 aaPredicted RBP20.65■□□□□ 0.9
ITGB2-212ENST00000498666 CHIC1Q5VXU3 224 aa20.62■□□□□ 0.89
ITGB2-212ENST00000498666 TRIM26Q12899 539 aaPredicted RBP20.59■□□□□ 0.89
ITGB2-212ENST00000498666 LOC105371045A0A1W2PR82 267 aa20.42■□□□□ 0.86
ITGB2-212ENST00000498666 UBTFP17480 764 aaKnown RBP20.41■□□□□ 0.86
ITGB2-212ENST00000498666 RANGAP1P46060 587 aaPredicted RBP20.34■□□□□ 0.85
ITGB2-212ENST00000498666 PPARGC1BQ86YN6 1023 aaKnown RBP20.3■□□□□ 0.84
ITGB2-212ENST00000498666 YTHDC1Q96MU7 727 aaKnown RBP20.13■□□□□ 0.81
ITGB2-212ENST00000498666 MYT1Q01538 1121 aa20.05■□□□□ 0.8
ITGB2-212ENST00000498666 ATP1B4Q9UN42 357 aaPredicted RBP20■□□□□ 0.79
ITGB2-212ENST00000498666 ERICH6Q7L0X2 663 aa19.9■□□□□ 0.78
ITGB2-212ENST00000498666 NEFLP07196 543 aa19.9■□□□□ 0.78
ITGB2-212ENST00000498666 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.85■□□□□ 0.77
ITGB2-212ENST00000498666 HNRNPUL2Q1KMD3 747 aaKnown RBP19.82■□□□□ 0.76
ITGB2-212ENST00000498666 DIEXFQ68CQ4 756 aaKnown RBP19.78■□□□□ 0.76
ITGB2-212ENST00000498666 ITGAEP38570 1179 aa19.67■□□□□ 0.74
ITGB2-212ENST00000498666 ZCCHC6Q5VYS8 1495 aaKnown RBP19.58■□□□□ 0.73
ITGB2-212ENST00000498666 DCAF1Q9Y4B6 1507 aa19.51■□□□□ 0.71
ITGB2-212ENST00000498666 GTF3C3Q9Y5Q9 886 aa19.46■□□□□ 0.71
ITGB2-212ENST00000498666 ABCC9O60706 1549 aa19.45■□□□□ 0.7
ITGB2-212ENST00000498666 ZNF316A6NFI3 1004 aaPredicted RBP19.39■□□□□ 0.69
ITGB2-212ENST00000498666 ACIN1Q9UKV3 1341 aaKnown RBP19.35■□□□□ 0.69
ITGB2-212ENST00000498666 CSRNP3Q8WYN3 585 aa19.31■□□□□ 0.68
ITGB2-212ENST00000498666 PABPN1Q86U42 306 aaKnown RBP eCLIP19.3■□□□□ 0.68
ITGB2-212ENST00000498666 MYT1LQ9UL68 1186 aa19.25■□□□□ 0.67
ITGB2-212ENST00000498666 FAM50AQ14320 339 aaKnown RBP19.24■□□□□ 0.67
ITGB2-212ENST00000498666 POLR3GLQ9BT43 218 aa19.23■□□□□ 0.67
ITGB2-212ENST00000498666 MYO15BQ96JP2 1530 aa19.22■□□□□ 0.67
ITGB2-212ENST00000498666 DAXXQ9UER7 740 aaPredicted RBP19.19■□□□□ 0.66
ITGB2-212ENST00000498666 CCDC180Q9P1Z9 1646 aa19.18■□□□□ 0.66
ITGB2-212ENST00000498666 NEUROD1Q13562 356 aa19.16■□□□□ 0.66
ITGB2-212ENST00000498666 SCRIBQ14160 1630 aa19.12■□□□□ 0.65
ITGB2-212ENST00000498666 CNGB1Q14028 1251 aaPredicted RBP19.08■□□□□ 0.65
ITGB2-212ENST00000498666 ANP32CO43423 234 aa19.06■□□□□ 0.64
ITGB2-212ENST00000498666 BCANQ96GW7 911 aa19.04■□□□□ 0.64
ITGB2-212ENST00000498666 TRIM52Q96A61 297 aa19.01■□□□□ 0.63
ITGB2-212ENST00000498666 SCAF1Q9H7N4 1312 aaKnown RBP18.94■□□□□ 0.62
ITGB2-212ENST00000498666 RSF1Q96T23 1441 aaPredicted RBP18.92■□□□□ 0.62
ITGB2-212ENST00000498666 CLSPNQ9HAW4 1339 aa18.91■□□□□ 0.62
ITGB2-212ENST00000498666 CDK11AQ9UQ88 783 aaPredicted RBP18.87■□□□□ 0.61
ITGB2-212ENST00000498666 RTL5Q5HYW3 569 aaPredicted RBP18.87■□□□□ 0.61
ITGB2-212ENST00000498666 P3H3Q8IVL6 736 aa18.82■□□□□ 0.6
ITGB2-212ENST00000498666 MIER1Q8N108 512 aa18.75■□□□□ 0.59
ITGB2-212ENST00000498666 SLC4A1APQ9BWU0 796 aaKnown RBP18.73■□□□□ 0.59
ITGB2-212ENST00000498666 ZNF326Q5BKZ1 582 aaKnown RBP18.73■□□□□ 0.59
ITGB2-212ENST00000498666 EEA1Q15075 1411 aa18.71■□□□□ 0.59
ITGB2-212ENST00000498666 CEP162Q5TB80 1403 aa18.7■□□□□ 0.58
ITGB2-212ENST00000498666 CLIP1P30622 1438 aa18.7■□□□□ 0.58
ITGB2-212ENST00000498666 FKBP8Q14318 412 aa18.7■□□□□ 0.58
ITGB2-212ENST00000498666 DDX10Q13206 875 aaKnown RBP18.68■□□□□ 0.58
ITGB2-212ENST00000498666 TONSLQ96HA7 1378 aa18.66■□□□□ 0.58
ITGB2-212ENST00000498666 GOLGA3Q08378 1498 aa18.62■□□□□ 0.57
ITGB2-212ENST00000498666 TNIKQ9UKE5 1360 aa18.61■□□□□ 0.57
ITGB2-212ENST00000498666 RB1CC1Q8TDY2 1594 aa18.59■□□□□ 0.57
ITGB2-212ENST00000498666 ZBTB47Q9UFB7 747 aaPredicted RBP18.57■□□□□ 0.56
ITGB2-212ENST00000498666 HNRNPUQ00839 825 aaKnown RBP eCLIP18.56■□□□□ 0.56
ITGB2-212ENST00000498666 NEFMP07197 916 aa18.54■□□□□ 0.56
ITGB2-212ENST00000498666 ARID3CA6NKF2 412 aa18.54■□□□□ 0.56
ITGB2-212ENST00000498666 FBLN2P98095 1184 aa18.53■□□□□ 0.56
ITGB2-212ENST00000498666 WRNQ14191 1432 aaPredicted RBP eCLIP18.5■□□□□ 0.55
ITGB2-212ENST00000498666 ANP32AP39687 249 aaKnown RBP18.49■□□□□ 0.55
ITGB2-212ENST00000498666 NACADO15069 1562 aa18.49■□□□□ 0.55
ITGB2-212ENST00000498666 CEP164Q9UPV0 1460 aa18.44■□□□□ 0.54
ITGB2-212ENST00000498666 FAM9BQ8IZU0 186 aa18.43■□□□□ 0.54
ITGB2-212ENST00000498666 ZNF777Q9ULD5 760 aaPredicted RBP18.43■□□□□ 0.54
ITGB2-212ENST00000498666 CECR2Q9BXF3 1484 aa18.42■□□□□ 0.54
ITGB2-212ENST00000498666 CHIC2Q9UKJ5 165 aa18.38■□□□□ 0.53
ITGB2-212ENST00000498666 MTUS2Q5JR59 1369 aa18.37■□□□□ 0.53
ITGB2-212ENST00000498666 BAZ1AQ9NRL2 1556 aaPredicted RBP18.37■□□□□ 0.53
ITGB2-212ENST00000498666 HIRIP3Q9BW71 556 aaPredicted RBP18.37■□□□□ 0.53
ITGB2-212ENST00000498666 CANXP27824 592 aaKnown RBP18.33■□□□□ 0.53
ITGB2-212ENST00000498666 MRS2Q9HD23 443 aa18.32■□□□□ 0.52
ITGB2-212ENST00000498666 NPM2Q86SE8 214 aaKnown RBP18.31■□□□□ 0.52
ITGB2-212ENST00000498666 SOGA1O94964 1423 aa18.3■□□□□ 0.52
ITGB2-212ENST00000498666 NPM1P06748 294 aaKnown RBP eCLIP18.29■□□□□ 0.52
ITGB2-212ENST00000498666 EIF4G2P78344 907 aaKnown RBP eCLIP18.28■□□□□ 0.52
ITGB2-212ENST00000498666 ESF1Q9H501 851 aaKnown RBP18.28■□□□□ 0.52
ITGB2-212ENST00000498666 CCDC136Q96JN2 1154 aa18.27■□□□□ 0.52
ITGB2-212ENST00000498666 TMC1Q8TDI8 760 aa18.27■□□□□ 0.52
ITGB2-212ENST00000498666 KIF27Q86VH2 1401 aa18.27■□□□□ 0.52
ITGB2-212ENST00000498666 BAZ1BQ9UIG0 1483 aaKnown RBP18.25■□□□□ 0.51
ITGB2-212ENST00000498666 IRX6P78412 446 aaPredicted RBP18.23■□□□□ 0.51
ITGB2-212ENST00000498666 MROH2BQ7Z745 1585 aa18.23■□□□□ 0.51
ITGB2-212ENST00000498666 RRP7BPQ9NSQ0 103 aa18.2■□□□□ 0.5
ITGB2-212ENST00000498666 TSPY4P0CV99 314 aa18.18■□□□□ 0.5
ITGB2-212ENST00000498666 TSPY10P0CW01 314 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms