RNA–Protein interactions for RNA: ENST00000548264.1

PIP4K2C-204, Transcript of phosphatidylinositol-5-phosphate 4-kinase type 2 gamma, humanhuman

TSL 3

Gene PIP4K2C, Length 403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIP4K2C-204ENST00000548264 NISCHQ9Y2I1 1504 aa33.61■■■□□ 2.97
PIP4K2C-204ENST00000548264 CCDC180Q9P1Z9 1646 aa30.13■■■□□ 2.41
PIP4K2C-204ENST00000548264 ABCC9O60706 1549 aa30.04■■■□□ 2.4
PIP4K2C-204ENST00000548264 RB1CC1Q8TDY2 1594 aa28.65■■■□□ 2.18
PIP4K2C-204ENST00000548264 NACADO15069 1562 aa28.47■■■□□ 2.15
PIP4K2C-204ENST00000548264 DCAF8L2P0C7V8 631 aa28.34■■■□□ 2.13
PIP4K2C-204ENST00000548264 MYO15BQ96JP2 1530 aa28.11■■■□□ 2.09
PIP4K2C-204ENST00000548264 DNAJC5BQ9UF47 199 aa28.08■■■□□ 2.09
PIP4K2C-204ENST00000548264 PABPN1Q86U42 306 aaKnown RBP eCLIP27.98■■■□□ 2.07
PIP4K2C-204ENST00000548264 UNC13AQ9UPW8 1703 aa27.96■■■□□ 2.07
PIP4K2C-204ENST00000548264 ZCCHC6Q5VYS8 1495 aaKnown RBP27.87■■■□□ 2.05
PIP4K2C-204ENST00000548264 BICRAQ9NZM4 1560 aa27.78■■■□□ 2.04
PIP4K2C-204ENST00000548264 DCAF1Q9Y4B6 1507 aa27.77■■■□□ 2.04
PIP4K2C-204ENST00000548264 SHROOM4Q9ULL8 1493 aa27.46■■□□□ 1.99
PIP4K2C-204ENST00000548264 SCRIBQ14160 1630 aa27.45■■□□□ 1.98
PIP4K2C-204ENST00000548264 CC2D2AQ9P2K1 1620 aa27.14■■□□□ 1.94
PIP4K2C-204ENST00000548264 EIF4G1Q04637 1599 aaKnown RBP27.11■■□□□ 1.93
PIP4K2C-204ENST00000548264 CECR2Q9BXF3 1484 aa27.06■■□□□ 1.92
PIP4K2C-204ENST00000548264 NCAPD3P42695 1498 aa26.28■■□□□ 1.8
PIP4K2C-204ENST00000548264 ATAD2BQ9ULI0 1458 aa26.21■■□□□ 1.79
PIP4K2C-204ENST00000548264 SMARCA4P51532 1647 aa26.2■■□□□ 1.78
PIP4K2C-204ENST00000548264 SMARCA2P51531 1590 aa26.15■■□□□ 1.78
PIP4K2C-204ENST00000548264 HMGXB3Q12766 1538 aa26.09■■□□□ 1.77
PIP4K2C-204ENST00000548264 BAZ1AQ9NRL2 1556 aaPredicted RBP26.09■■□□□ 1.77
PIP4K2C-204ENST00000548264 BAZ1BQ9UIG0 1483 aaKnown RBP25.97■■□□□ 1.75
PIP4K2C-204ENST00000548264 ERCC6Q03468 1493 aa25.96■■□□□ 1.75
PIP4K2C-204ENST00000548264 PEG3Q9GZU2 1588 aa25.95■■□□□ 1.74
PIP4K2C-204ENST00000548264 MROH2BQ7Z745 1585 aa25.88■■□□□ 1.73
PIP4K2C-204ENST00000548264 CUX2O14529 1486 aa25.88■■□□□ 1.73
PIP4K2C-204ENST00000548264 NESP48681 1621 aa25.81■■□□□ 1.72
PIP4K2C-204ENST00000548264 DNAJC5Q9H3Z4 198 aa25.76■■□□□ 1.71
PIP4K2C-204ENST00000548264 LAMC3Q9Y6N6 1575 aa25.68■■□□□ 1.7
PIP4K2C-204ENST00000548264 WIZO95785 1651 aa25.58■■□□□ 1.68
PIP4K2C-204ENST00000548264 THOC2Q8NI27 1593 aaKnown RBP25.55■■□□□ 1.68
PIP4K2C-204ENST00000548264 PDS5BQ9NTI5 1447 aa25.54■■□□□ 1.68
PIP4K2C-204ENST00000548264 KIF21AQ7Z4S6 1674 aa25.49■■□□□ 1.67
PIP4K2C-204ENST00000548264 CADPSQ9ULU8 1353 aa25.49■■□□□ 1.67
PIP4K2C-204ENST00000548264 RSF1Q96T23 1441 aaPredicted RBP25.38■■□□□ 1.65
PIP4K2C-204ENST00000548264 MRC2Q9UBG0 1479 aa25.3■■□□□ 1.64
PIP4K2C-204ENST00000548264 TOP2AP11388 1531 aaKnown RBP25.27■■□□□ 1.64
PIP4K2C-204ENST00000548264 WDR62O43379 1518 aa25.23■■□□□ 1.63
PIP4K2C-204ENST00000548264 CEP164Q9UPV0 1460 aa25.21■■□□□ 1.63
PIP4K2C-204ENST00000548264 CFTRP13569 1480 aa25.21■■□□□ 1.63
PIP4K2C-204ENST00000548264 FANCD2Q9BXW9 1451 aa25.2■■□□□ 1.62
PIP4K2C-204ENST00000548264 CCDC88BA6NC98 1476 aa24.98■■□□□ 1.59
PIP4K2C-204ENST00000548264 URB2Q14146 1524 aaKnown RBP24.97■■□□□ 1.59
PIP4K2C-204ENST00000548264 PRDM2Q13029 1718 aa24.95■■□□□ 1.59
PIP4K2C-204ENST00000548264 TOPBP1Q92547 1522 aa24.72■■□□□ 1.55
PIP4K2C-204ENST00000548264 IFT140Q96RY7 1462 aa24.72■■□□□ 1.55
PIP4K2C-204ENST00000548264 OSCARQ8IYS5 282 aa24.71■■□□□ 1.55
PIP4K2C-204ENST00000548264 ABCC8Q09428 1581 aa24.71■■□□□ 1.55
PIP4K2C-204ENST00000548264 TRIM41Q8WV44 630 aa24.67■■□□□ 1.54
PIP4K2C-204ENST00000548264 DNMBPQ6XZF7 1577 aa24.65■■□□□ 1.54
PIP4K2C-204ENST00000548264 ZNF608Q9ULD9 1512 aaPredicted RBP24.65■■□□□ 1.54
PIP4K2C-204ENST00000548264 EIF4G3O43432 1585 aaKnown RBP24.52■■□□□ 1.52
PIP4K2C-204ENST00000548264 TARBP1Q13395 1621 aaKnown RBP24.49■■□□□ 1.51
PIP4K2C-204ENST00000548264 POLA1P09884 1462 aaPredicted RBP24.47■■□□□ 1.51
PIP4K2C-204ENST00000548264 AQRO60306 1485 aaKnown RBP eCLIP24.44■■□□□ 1.52e-6■■■□□ 19.1
PIP4K2C-204ENST00000548264 RAD54L2Q9Y4B4 1467 aa24.38■■□□□ 1.49
PIP4K2C-204ENST00000548264 SOGA1O94964 1423 aa24.37■■□□□ 1.49
PIP4K2C-204ENST00000548264 RIMBP3CA6NJZ7 1639 aa24.36■■□□□ 1.49
PIP4K2C-204ENST00000548264 RIMBP3BA6NNM3 1639 aa24.36■■□□□ 1.49
PIP4K2C-204ENST00000548264 RIMBP3Q9UFD9 1639 aa24.36■■□□□ 1.49
PIP4K2C-204ENST00000548264 FGD5Q6ZNL6 1462 aa24.33■■□□□ 1.49
PIP4K2C-204ENST00000548264 SUPT5HO00267 1087 aaKnown RBP24.33■■□□□ 1.49
PIP4K2C-204ENST00000548264 CUX1P39880 1505 aa24.32■■□□□ 1.48
PIP4K2C-204ENST00000548264 CHD1O14646 1710 aa24.32■■□□□ 1.48
PIP4K2C-204ENST00000548264 ARHGEF11O15085 1522 aa24.3■■□□□ 1.48
PIP4K2C-204ENST00000548264 TDRD9Q8NDG6 1382 aaKnown RBP24.3■■□□□ 1.48
PIP4K2C-204ENST00000548264 FBLN2P98095 1184 aa24.28■■□□□ 1.48
PIP4K2C-204ENST00000548264 WDR97A6NE52 1622 aa24.28■■□□□ 1.48
PIP4K2C-204ENST00000548264 SNAPC4Q5SXM2 1469 aa24.2■■□□□ 1.47
PIP4K2C-204ENST00000548264 GRIN2BQ13224 1484 aa24.16■■□□□ 1.46
PIP4K2C-204ENST00000548264 MAGI1Q96QZ7 1491 aaPredicted RBP24.15■■□□□ 1.46
PIP4K2C-204ENST00000548264 CYB5RLQ6IPT4 315 aa24.12■■□□□ 1.45
PIP4K2C-204ENST00000548264 CHMP7Q8WUX9 453 aaPredicted RBP24.12■■□□□ 1.45
PIP4K2C-204ENST00000548264 GAPVD1Q14C86 1478 aa24.08■■□□□ 1.45
PIP4K2C-204ENST00000548264 ABCA10Q8WWZ4 1543 aa24.07■■□□□ 1.44
PIP4K2C-204ENST00000548264 SYNJ2O15056 1496 aa24.07■■□□□ 1.44
PIP4K2C-204ENST00000548264 SYNJ1O43426 1573 aa24.06■■□□□ 1.44
PIP4K2C-204ENST00000548264 ARAP1Q96P48 1450 aa24.06■■□□□ 1.44
PIP4K2C-204ENST00000548264 PBRM1Q86U86 1689 aa24.05■■□□□ 1.44
PIP4K2C-204ENST00000548264 CLASP1Q7Z460 1538 aa24.05■■□□□ 1.44
PIP4K2C-204ENST00000548264 ABCA5Q8WWZ7 1642 aa24.02■■□□□ 1.44
PIP4K2C-204ENST00000548264 WRNQ14191 1432 aaPredicted RBP eCLIP24■■□□□ 1.43
PIP4K2C-204ENST00000548264 TOP2BQ02880 1626 aa23.96■■□□□ 1.43
PIP4K2C-204ENST00000548264 BIVM-ERCC5R4GMW8 1640 aa23.96■■□□□ 1.43
PIP4K2C-204ENST00000548264 GRIN2AQ12879 1464 aa23.84■■□□□ 1.41
PIP4K2C-204ENST00000548264 TRHP20396 242 aaPredicted RBP23.84■■□□□ 1.41
PIP4K2C-204ENST00000548264 ADAMTS12P58397 1594 aa23.83■■□□□ 1.41
PIP4K2C-204ENST00000548264 FHAD1B1AJZ9 1412 aa23.78■■□□□ 1.4
PIP4K2C-204ENST00000548264 ERICH3Q5RHP9 1530 aa23.77■■□□□ 1.4
PIP4K2C-204ENST00000548264 NUP160Q12769 1436 aa23.76■■□□□ 1.39
PIP4K2C-204ENST00000548264 CEP170Q5SW79 1584 aa23.74■■□□□ 1.39
PIP4K2C-204ENST00000548264 ERCC6L2Q5T890 1561 aa23.66■■□□□ 1.38
PIP4K2C-204ENST00000548264 SHROOM2Q13796 1616 aa23.63■■□□□ 1.37
PIP4K2C-204ENST00000548264 PRG4Q92954 1404 aaPredicted RBP23.52■■□□□ 1.36
PIP4K2C-204ENST00000548264 JPH4Q96JJ6 628 aa23.52■■□□□ 1.36
PIP4K2C-204ENST00000548264 KIF27Q86VH2 1401 aa23.51■■□□□ 1.35
PIP4K2C-204ENST00000548264 RUSC2Q8N2Y8 1516 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms