RNA–Protein interactions for RNA: ENST00000302347.9

ITGB2-201, Transcript of integrin subunit beta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGB2, Length 2,955 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB2-201ENST00000302347 NISCHQ9Y2I1 1504 aa27.43■■□□□ 1.98
ITGB2-201ENST00000302347 DCAF8L2P0C7V8 631 aa23.8■■□□□ 1.4
ITGB2-201ENST00000302347 SHROOM4Q9ULL8 1493 aa23.77■■□□□ 1.4
ITGB2-201ENST00000302347 PELP1Q8IZL8 1130 aaKnown RBP23.36■■□□□ 1.33
ITGB2-201ENST00000302347 SUPT5HO00267 1087 aaKnown RBP23.19■■□□□ 1.3
ITGB2-201ENST00000302347 CCDC180Q9P1Z9 1646 aa23.16■■□□□ 1.3
ITGB2-201ENST00000302347 ZCCHC6Q5VYS8 1495 aaKnown RBP23.02■■□□□ 1.28
ITGB2-201ENST00000302347 MYT1Q01538 1121 aa22.79■■□□□ 1.24
ITGB2-201ENST00000302347 ABCC9O60706 1549 aa22.5■■□□□ 1.19
ITGB2-201ENST00000302347 HRCP23327 699 aa22.48■■□□□ 1.19
ITGB2-201ENST00000302347 DCAF1Q9Y4B6 1507 aa22.2■■□□□ 1.14
ITGB2-201ENST00000302347 SCRIBQ14160 1630 aa22.13■■□□□ 1.13
ITGB2-201ENST00000302347 CHIC1Q5VXU3 224 aa22.02■■□□□ 1.12
ITGB2-201ENST00000302347 PPARGC1BQ86YN6 1023 aaKnown RBP22.02■■□□□ 1.12
ITGB2-201ENST00000302347 SCAF1Q9H7N4 1312 aaKnown RBP21.9■■□□□ 1.1
ITGB2-201ENST00000302347 NACADO15069 1562 aa21.71■■□□□ 1.07
ITGB2-201ENST00000302347 PABPN1Q86U42 306 aaKnown RBP eCLIP21.69■■□□□ 1.06
ITGB2-201ENST00000302347 MYO15BQ96JP2 1530 aa21.69■■□□□ 1.06
ITGB2-201ENST00000302347 RSF1Q96T23 1441 aaPredicted RBP21.69■■□□□ 1.06
ITGB2-201ENST00000302347 TTBK1Q5TCY1 1321 aaPredicted RBP21.69■■□□□ 1.06
ITGB2-201ENST00000302347 CECR2Q9BXF3 1484 aa21.65■■□□□ 1.06
ITGB2-201ENST00000302347 LOC105371045A0A1W2PR82 267 aa21.63■■□□□ 1.05
ITGB2-201ENST00000302347 EHMT2Q96KQ7 1210 aa21.62■■□□□ 1.05
ITGB2-201ENST00000302347 FAM9AQ8IZU1 332 aaPredicted RBP21.55■■□□□ 1.04
ITGB2-201ENST00000302347 PCGF6Q9BYE7 350 aa21.55■■□□□ 1.04
ITGB2-201ENST00000302347 RB1CC1Q8TDY2 1594 aa21.52■■□□□ 1.04
ITGB2-201ENST00000302347 TRIM41Q8WV44 630 aa21.46■■□□□ 1.03
ITGB2-201ENST00000302347 MROH2BQ7Z745 1585 aa21.42■■□□□ 1.02
ITGB2-201ENST00000302347 WIZO95785 1651 aa21.26■□□□□ 0.99
ITGB2-201ENST00000302347 PRKCSHP14314 528 aaPredicted RBP21.25■□□□□ 0.99
ITGB2-201ENST00000302347 BCL11AQ9H165 835 aa21.21■□□□□ 0.99
ITGB2-201ENST00000302347 BAZ1AQ9NRL2 1556 aaPredicted RBP21.06■□□□□ 0.96
ITGB2-201ENST00000302347 UNC13AQ9UPW8 1703 aa21.06■□□□□ 0.96
ITGB2-201ENST00000302347 ACIN1Q9UKV3 1341 aaKnown RBP21.02■□□□□ 0.96
ITGB2-201ENST00000302347 GTF3C3Q9Y5Q9 886 aa20.95■□□□□ 0.94
ITGB2-201ENST00000302347 NEUROD1Q13562 356 aa20.93■□□□□ 0.94
ITGB2-201ENST00000302347 BICRAQ9NZM4 1560 aa20.92■□□□□ 0.94
ITGB2-201ENST00000302347 SMARCA4P51532 1647 aa20.92■□□□□ 0.94
ITGB2-201ENST00000302347 CENPBP07199 599 aaPredicted RBP20.9■□□□□ 0.94
ITGB2-201ENST00000302347 CCDC88BA6NC98 1476 aa20.88■□□□□ 0.93
ITGB2-201ENST00000302347 ABCC8Q09428 1581 aa20.77■□□□□ 0.92
ITGB2-201ENST00000302347 TOP2AP11388 1531 aaKnown RBP20.76■□□□□ 0.91
ITGB2-201ENST00000302347 ZEB1P37275 1124 aaPredicted RBP20.73■□□□□ 0.91
ITGB2-201ENST00000302347 ERICH6Q7L0X2 663 aa20.73■□□□□ 0.91
ITGB2-201ENST00000302347 SMARCA2P51531 1590 aa20.68■□□□□ 0.9
ITGB2-201ENST00000302347 RANGAP1P46060 587 aaPredicted RBP20.63■□□□□ 0.89
ITGB2-201ENST00000302347 UBTFP17480 764 aaKnown RBP20.61■□□□□ 0.89
ITGB2-201ENST00000302347 TRIM26Q12899 539 aaPredicted RBP20.61■□□□□ 0.89
ITGB2-201ENST00000302347 ATAD2BQ9ULI0 1458 aa20.61■□□□□ 0.89
ITGB2-201ENST00000302347 BAZ1BQ9UIG0 1483 aaKnown RBP20.59■□□□□ 0.89
ITGB2-201ENST00000302347 SOGA1O94964 1423 aa20.57■□□□□ 0.88
ITGB2-201ENST00000302347 APLP2Q06481 763 aa20.53■□□□□ 0.88
ITGB2-201ENST00000302347 RUSC2Q8N2Y8 1516 aa20.49■□□□□ 0.87
ITGB2-201ENST00000302347 CSRNP3Q8WYN3 585 aa20.49■□□□□ 0.87
ITGB2-201ENST00000302347 ANP32EQ9BTT0 268 aa20.46■□□□□ 0.87
ITGB2-201ENST00000302347 EIF4G1Q04637 1599 aaKnown RBP20.43■□□□□ 0.86
ITGB2-201ENST00000302347 WRNQ14191 1432 aaPredicted RBP eCLIP20.43■□□□□ 0.86
ITGB2-201ENST00000302347 PEG3Q9GZU2 1588 aa20.33■□□□□ 0.85
ITGB2-201ENST00000302347 SYNJ1O43426 1573 aa20.22■□□□□ 0.83
ITGB2-201ENST00000302347 NCAPD3P42695 1498 aa20.2■□□□□ 0.82
ITGB2-201ENST00000302347 CEP162Q5TB80 1403 aa20.2■□□□□ 0.82
ITGB2-201ENST00000302347 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.15■□□□□ 0.82
ITGB2-201ENST00000302347 DNAJC5BQ9UF47 199 aa20.11■□□□□ 0.81
ITGB2-201ENST00000302347 TNIKQ9UKE5 1360 aa20.1■□□□□ 0.81
ITGB2-201ENST00000302347 DIEXFQ68CQ4 756 aaKnown RBP20.09■□□□□ 0.81
ITGB2-201ENST00000302347 EEA1Q15075 1411 aa20.06■□□□□ 0.8
ITGB2-201ENST00000302347 GOLGA3Q08378 1498 aa20.05■□□□□ 0.8
ITGB2-201ENST00000302347 CCER1Q8TC90 406 aaPredicted RBP20.03■□□□□ 0.8
ITGB2-201ENST00000302347 RAPGEF2Q9Y4G8 1499 aa20.02■□□□□ 0.79
ITGB2-201ENST00000302347 HMGXB3Q12766 1538 aa20■□□□□ 0.79
ITGB2-201ENST00000302347 CC2D2AQ9P2K1 1620 aa19.99■□□□□ 0.79
ITGB2-201ENST00000302347 YTHDC1Q96MU7 727 aaKnown RBP19.97■□□□□ 0.79
ITGB2-201ENST00000302347 CEP164Q9UPV0 1460 aa19.96■□□□□ 0.79
ITGB2-201ENST00000302347 HNRNPUL2Q1KMD3 747 aaKnown RBP19.96■□□□□ 0.79
ITGB2-201ENST00000302347 CADPSQ9ULU8 1353 aa19.95■□□□□ 0.78
ITGB2-201ENST00000302347 CFTRP13569 1480 aa19.95■□□□□ 0.78
ITGB2-201ENST00000302347 CLIP1P30622 1438 aa19.95■□□□□ 0.78
ITGB2-201ENST00000302347 CUX1P39880 1505 aa19.92■□□□□ 0.78
ITGB2-201ENST00000302347 TOP2BQ02880 1626 aa19.89■□□□□ 0.77
ITGB2-201ENST00000302347 NESP48681 1621 aa19.87■□□□□ 0.77
ITGB2-201ENST00000302347 P3H3Q8IVL6 736 aa19.86■□□□□ 0.77
ITGB2-201ENST00000302347 ATP1B4Q9UN42 357 aaPredicted RBP19.86■□□□□ 0.77
ITGB2-201ENST00000302347 TSHZ2Q9NRE2 1034 aa19.85■□□□□ 0.77
ITGB2-201ENST00000302347 KIF27Q86VH2 1401 aa19.83■□□□□ 0.77
ITGB2-201ENST00000302347 ANO8Q9HCE9 1232 aaPredicted RBP19.81■□□□□ 0.76
ITGB2-201ENST00000302347 CUX2O14529 1486 aa19.8■□□□□ 0.76
ITGB2-201ENST00000302347 FANCD2Q9BXW9 1451 aa19.75■□□□□ 0.75
ITGB2-201ENST00000302347 ITGAEP38570 1179 aa19.73■□□□□ 0.75
ITGB2-201ENST00000302347 KIF21BO75037 1637 aa19.72■□□□□ 0.75
ITGB2-201ENST00000302347 KANK4Q5T7N3 995 aaPredicted RBP19.71■□□□□ 0.75
ITGB2-201ENST00000302347 FGD5Q6ZNL6 1462 aa19.7■□□□□ 0.74
ITGB2-201ENST00000302347 IGF1RP08069 1367 aa19.7■□□□□ 0.74
ITGB2-201ENST00000302347 RAD54L2Q9Y4B4 1467 aa19.7■□□□□ 0.74
ITGB2-201ENST00000302347 BIVM-ERCC5R4GMW8 1640 aa19.7■□□□□ 0.74
ITGB2-201ENST00000302347 VPS8Q8N3P4 1428 aa19.68■□□□□ 0.74
ITGB2-201ENST00000302347 PRXQ9BXM0 1461 aa19.68■□□□□ 0.74
ITGB2-201ENST00000302347 CARMIL1Q5VZK9 1371 aa19.66■□□□□ 0.74
ITGB2-201ENST00000302347 SUPT16HQ9Y5B9 1047 aaKnown RBP19.63■□□□□ 0.73
ITGB2-201ENST00000302347 SLC24A1O60721 1099 aa19.63■□□□□ 0.73
ITGB2-201ENST00000302347 TDRD9Q8NDG6 1382 aaKnown RBP19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms