RNA–Protein interactions for RNA: ENST00000511171.5

LEMD2-209, Transcript of LEM domain containing 2, humanhuman

TSL 2

Gene LEMD2, Length 4,870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD2-209ENST00000511171 NISCHQ9Y2I1 1504 aa24.06■■□□□ 1.44
LEMD2-209ENST00000511171 DCAF8L2P0C7V8 631 aa22.62■■□□□ 1.21
LEMD2-209ENST00000511171 SHROOM4Q9ULL8 1493 aa21.96■■□□□ 1.11
LEMD2-209ENST00000511171 SUPT5HO00267 1087 aaKnown RBP21.89■■□□□ 1.09
LEMD2-209ENST00000511171 EHMT2Q96KQ7 1210 aa20.7■□□□□ 0.9
LEMD2-209ENST00000511171 FAM9AQ8IZU1 332 aaPredicted RBP20.47■□□□□ 0.87
LEMD2-209ENST00000511171 TRIM41Q8WV44 630 aa20.29■□□□□ 0.84
LEMD2-209ENST00000511171 PCGF6Q9BYE7 350 aa20.28■□□□□ 0.84
LEMD2-209ENST00000511171 CHIC1Q5VXU3 224 aa20.19■□□□□ 0.82
LEMD2-209ENST00000511171 ZCCHC6Q5VYS8 1495 aaKnown RBP20.09■□□□□ 0.81
LEMD2-209ENST00000511171 ABCC9O60706 1549 aa20.08■□□□□ 0.8
LEMD2-209ENST00000511171 CCDC180Q9P1Z9 1646 aa20■□□□□ 0.79
LEMD2-209ENST00000511171 TTBK1Q5TCY1 1321 aaPredicted RBP19.96■□□□□ 0.79
LEMD2-209ENST00000511171 LOC105371045A0A1W2PR82 267 aa19.93■□□□□ 0.78
LEMD2-209ENST00000511171 APLP2Q06481 763 aa19.84■□□□□ 0.77
LEMD2-209ENST00000511171 RANGAP1P46060 587 aaPredicted RBP19.77■□□□□ 0.76
LEMD2-209ENST00000511171 UBTFP17480 764 aaKnown RBP19.74■□□□□ 0.75
LEMD2-209ENST00000511171 PPARGC1BQ86YN6 1023 aaKnown RBP19.68■□□□□ 0.74
LEMD2-209ENST00000511171 PABPN1Q86U42 306 aaKnown RBP eCLIP19.64■□□□□ 0.736e-9■□□□□ 10.2
LEMD2-209ENST00000511171 TRIM26Q12899 539 aaPredicted RBP19.61■□□□□ 0.73
LEMD2-209ENST00000511171 SCRIBQ14160 1630 aa19.61■□□□□ 0.73
LEMD2-209ENST00000511171 ZEB1P37275 1124 aaPredicted RBP19.54■□□□□ 0.72
LEMD2-209ENST00000511171 HRCP23327 699 aa19.54■□□□□ 0.72
LEMD2-209ENST00000511171 CCER1Q8TC90 406 aaPredicted RBP19.54■□□□□ 0.72
LEMD2-209ENST00000511171 ATP1B4Q9UN42 357 aaPredicted RBP19.32■□□□□ 0.68
LEMD2-209ENST00000511171 DCAF1Q9Y4B6 1507 aa19.24■□□□□ 0.67
LEMD2-209ENST00000511171 RSF1Q96T23 1441 aaPredicted RBP19.17■□□□□ 0.66
LEMD2-209ENST00000511171 MYO15BQ96JP2 1530 aa19.17■□□□□ 0.66
LEMD2-209ENST00000511171 PELP1Q8IZL8 1130 aaKnown RBP19.17■□□□□ 0.66
LEMD2-209ENST00000511171 NACADO15069 1562 aa19.08■□□□□ 0.65
LEMD2-209ENST00000511171 HNRNPUL2Q1KMD3 747 aaKnown RBP19.07■□□□□ 0.64
LEMD2-209ENST00000511171 RB1CC1Q8TDY2 1594 aa19.06■□□□□ 0.64
LEMD2-209ENST00000511171 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.05■□□□□ 0.64
LEMD2-209ENST00000511171 MYT1Q01538 1121 aa19.02■□□□□ 0.63
LEMD2-209ENST00000511171 ITGAEP38570 1179 aa18.98■□□□□ 0.63
LEMD2-209ENST00000511171 CSRNP3Q8WYN3 585 aa18.97■□□□□ 0.63
LEMD2-209ENST00000511171 CENPBP07199 599 aaPredicted RBP18.96■□□□□ 0.63
LEMD2-209ENST00000511171 CECR2Q9BXF3 1484 aa18.92■□□□□ 0.62
LEMD2-209ENST00000511171 YTHDC1Q96MU7 727 aaKnown RBP18.85■□□□□ 0.61
LEMD2-209ENST00000511171 BAZ1AQ9NRL2 1556 aaPredicted RBP18.72■□□□□ 0.59
LEMD2-209ENST00000511171 MROH2BQ7Z745 1585 aa18.71■□□□□ 0.59
LEMD2-209ENST00000511171 DIEXFQ68CQ4 756 aaKnown RBP18.63■□□□□ 0.57
LEMD2-209ENST00000511171 FAM50AQ14320 339 aaKnown RBP18.61■□□□□ 0.57
LEMD2-209ENST00000511171 P3H3Q8IVL6 736 aa18.56■□□□□ 0.56
LEMD2-209ENST00000511171 BAZ1BQ9UIG0 1483 aaKnown RBP18.55■□□□□ 0.56
LEMD2-209ENST00000511171 WRNQ14191 1432 aaPredicted RBP eCLIP18.53■□□□□ 0.56
LEMD2-209ENST00000511171 WIZO95785 1651 aa18.49■□□□□ 0.55
LEMD2-209ENST00000511171 CEP162Q5TB80 1403 aa18.47■□□□□ 0.55
LEMD2-209ENST00000511171 EEA1Q15075 1411 aa18.47■□□□□ 0.55
LEMD2-209ENST00000511171 CCDC88BA6NC98 1476 aa18.45■□□□□ 0.54
LEMD2-209ENST00000511171 CLIP1P30622 1438 aa18.43■□□□□ 0.54
LEMD2-209ENST00000511171 GOLGA3Q08378 1498 aa18.41■□□□□ 0.54
LEMD2-209ENST00000511171 NEUROD1Q13562 356 aa18.39■□□□□ 0.53
LEMD2-209ENST00000511171 ABCC8Q09428 1581 aa18.39■□□□□ 0.53
LEMD2-209ENST00000511171 SOGA1O94964 1423 aa18.38■□□□□ 0.53
LEMD2-209ENST00000511171 ZNF316A6NFI3 1004 aaPredicted RBP18.37■□□□□ 0.53
LEMD2-209ENST00000511171 TNIKQ9UKE5 1360 aa18.36■□□□□ 0.53
LEMD2-209ENST00000511171 FBLN2P98095 1184 aa18.32■□□□□ 0.52
LEMD2-209ENST00000511171 TOP2AP11388 1531 aaKnown RBP18.31■□□□□ 0.52
LEMD2-209ENST00000511171 ARID3CA6NKF2 412 aa18.31■□□□□ 0.52
LEMD2-209ENST00000511171 NEFLP07196 543 aa18.31■□□□□ 0.52
LEMD2-209ENST00000511171 TRIM52Q96A61 297 aa18.29■□□□□ 0.52
LEMD2-209ENST00000511171 CEP164Q9UPV0 1460 aa18.28■□□□□ 0.52
LEMD2-209ENST00000511171 POLR3GLQ9BT43 218 aa18.27■□□□□ 0.51
LEMD2-209ENST00000511171 SMARCA4P51532 1647 aa18.23■□□□□ 0.51
LEMD2-209ENST00000511171 KIF27Q86VH2 1401 aa18.2■□□□□ 0.5
LEMD2-209ENST00000511171 CNGB1Q14028 1251 aaPredicted RBP18.18■□□□□ 0.5
LEMD2-209ENST00000511171 MYT1LQ9UL68 1186 aa18.18■□□□□ 0.5
LEMD2-209ENST00000511171 SMARCA2P51531 1590 aa18.18■□□□□ 0.5
LEMD2-209ENST00000511171 GTF3C3Q9Y5Q9 886 aa18.13■□□□□ 0.49
LEMD2-209ENST00000511171 ATAD2BQ9ULI0 1458 aa18.11■□□□□ 0.49
LEMD2-209ENST00000511171 ACIN1Q9UKV3 1341 aaKnown RBP18.07■□□□□ 0.48
LEMD2-209ENST00000511171 RUSC2Q8N2Y8 1516 aa18.02■□□□□ 0.47
LEMD2-209ENST00000511171 ZNF777Q9ULD5 760 aaPredicted RBP18.01■□□□□ 0.47
LEMD2-209ENST00000511171 CUX2O14529 1486 aa18.01■□□□□ 0.47
LEMD2-209ENST00000511171 MTUS2Q5JR59 1369 aa18.01■□□□□ 0.47
LEMD2-209ENST00000511171 ZNF326Q5BKZ1 582 aaKnown RBP18■□□□□ 0.47
LEMD2-209ENST00000511171 CDK11AQ9UQ88 783 aaPredicted RBP17.99■□□□□ 0.47
LEMD2-209ENST00000511171 ERICH6Q7L0X2 663 aa17.98■□□□□ 0.47
LEMD2-209ENST00000511171 ANP32CO43423 234 aa17.97■□□□□ 0.47
LEMD2-209ENST00000511171 CHIC2Q9UKJ5 165 aa17.97■□□□□ 0.47
LEMD2-209ENST00000511171 VPS8Q8N3P4 1428 aa17.97■□□□□ 0.47
LEMD2-209ENST00000511171 CARMIL1Q5VZK9 1371 aa17.95■□□□□ 0.46
LEMD2-209ENST00000511171 TONSLQ96HA7 1378 aa17.92■□□□□ 0.46
LEMD2-209ENST00000511171 RAPGEF2Q9Y4G8 1499 aa17.88■□□□□ 0.45
LEMD2-209ENST00000511171 MIER1Q8N108 512 aa17.88■□□□□ 0.45
LEMD2-209ENST00000511171 KANK4Q5T7N3 995 aaPredicted RBP17.87■□□□□ 0.45
LEMD2-209ENST00000511171 CHMP7Q8WUX9 453 aaPredicted RBP17.86■□□□□ 0.45
LEMD2-209ENST00000511171 DDX10Q13206 875 aaKnown RBP17.86■□□□□ 0.45
LEMD2-209ENST00000511171 CADPSQ9ULU8 1353 aa17.84■□□□□ 0.45
LEMD2-209ENST00000511171 BCANQ96GW7 911 aa17.83■□□□□ 0.45
LEMD2-209ENST00000511171 CCNB3Q8WWL7 1395 aa17.81■□□□□ 0.44
LEMD2-209ENST00000511171 RRP7BPQ9NSQ0 103 aa17.81■□□□□ 0.44
LEMD2-209ENST00000511171 HIRIP3Q9BW71 556 aaPredicted RBP17.78■□□□□ 0.44
LEMD2-209ENST00000511171 FHAD1B1AJZ9 1412 aa17.78■□□□□ 0.44
LEMD2-209ENST00000511171 SCAF1Q9H7N4 1312 aaKnown RBP17.77■□□□□ 0.44
LEMD2-209ENST00000511171 TDRD9Q8NDG6 1382 aaKnown RBP17.73■□□□□ 0.43
LEMD2-209ENST00000511171 SIN3AQ96ST3 1273 aa17.7■□□□□ 0.42
LEMD2-209ENST00000511171 SLC4A1APQ9BWU0 796 aaKnown RBP17.69■□□□□ 0.42
LEMD2-209ENST00000511171 CLSPNQ9HAW4 1339 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms