RNA–Protein interactions for RNA: ENST00000376004.4

KDELC1-201, Transcript of KDEL motif containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDELC1, Length 2,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDELC1-201ENST00000376004 NISCHQ9Y2I1 1504 aa40.26■■■■■ 4.04
KDELC1-201ENST00000376004 CCDC180Q9P1Z9 1646 aa34.93■■■■□ 3.18
KDELC1-201ENST00000376004 ZCCHC6Q5VYS8 1495 aaKnown RBP33.86■■■■□ 3.01
KDELC1-201ENST00000376004 DCAF8L2P0C7V8 631 aa33.27■■■□□ 2.92
KDELC1-201ENST00000376004 DCAF1Q9Y4B6 1507 aa33.22■■■□□ 2.91
KDELC1-201ENST00000376004 SHROOM4Q9ULL8 1493 aa33.11■■■□□ 2.89
KDELC1-201ENST00000376004 ABCC9O60706 1549 aa32.98■■■□□ 2.87
KDELC1-201ENST00000376004 MYO15BQ96JP2 1530 aa32.73■■■□□ 2.83
KDELC1-201ENST00000376004 NACADO15069 1562 aa32.5■■■□□ 2.79
KDELC1-201ENST00000376004 SCRIBQ14160 1630 aa32.26■■■□□ 2.76
KDELC1-201ENST00000376004 RB1CC1Q8TDY2 1594 aa32.18■■■□□ 2.74
KDELC1-201ENST00000376004 SUPT5HO00267 1087 aaKnown RBP31.94■■■□□ 2.7
KDELC1-201ENST00000376004 UNC13AQ9UPW8 1703 aa31.62■■■□□ 2.65
KDELC1-201ENST00000376004 RSF1Q96T23 1441 aaPredicted RBP31.35■■■□□ 2.61
KDELC1-201ENST00000376004 CECR2Q9BXF3 1484 aa31.34■■■□□ 2.61
KDELC1-201ENST00000376004 BICRAQ9NZM4 1560 aa31.29■■■□□ 2.6
KDELC1-201ENST00000376004 PABPN1Q86U42 306 aaKnown RBP eCLIP31.2■■■□□ 2.58
KDELC1-201ENST00000376004 MROH2BQ7Z745 1585 aa31.16■■■□□ 2.58
KDELC1-201ENST00000376004 BAZ1AQ9NRL2 1556 aaPredicted RBP31.04■■■□□ 2.56
KDELC1-201ENST00000376004 WIZO95785 1651 aa30.92■■■□□ 2.54
KDELC1-201ENST00000376004 SMARCA4P51532 1647 aa30.9■■■□□ 2.54
KDELC1-201ENST00000376004 CHIC1Q5VXU3 224 aa30.67■■■□□ 2.5
KDELC1-201ENST00000376004 TOP2AP11388 1531 aaKnown RBP30.54■■■□□ 2.48
KDELC1-201ENST00000376004 PEG3Q9GZU2 1588 aa30.48■■■□□ 2.47
KDELC1-201ENST00000376004 ATAD2BQ9ULI0 1458 aa30.35■■■□□ 2.45
KDELC1-201ENST00000376004 EIF4G1Q04637 1599 aaKnown RBP30.3■■■□□ 2.44
KDELC1-201ENST00000376004 SMARCA2P51531 1590 aa30.29■■■□□ 2.44
KDELC1-201ENST00000376004 CCDC88BA6NC98 1476 aa30.28■■■□□ 2.44
KDELC1-201ENST00000376004 BAZ1BQ9UIG0 1483 aaKnown RBP30.18■■■□□ 2.42
KDELC1-201ENST00000376004 NCAPD3P42695 1498 aa30.04■■■□□ 2.4
KDELC1-201ENST00000376004 HMGXB3Q12766 1538 aa29.98■■■□□ 2.39
KDELC1-201ENST00000376004 TRIM41Q8WV44 630 aa29.96■■■□□ 2.39
KDELC1-201ENST00000376004 CC2D2AQ9P2K1 1620 aa29.81■■■□□ 2.36
KDELC1-201ENST00000376004 ABCC8Q09428 1581 aa29.74■■■□□ 2.35
KDELC1-201ENST00000376004 LOC105371045A0A1W2PR82 267 aa29.56■■■□□ 2.32
KDELC1-201ENST00000376004 FAM9AQ8IZU1 332 aaPredicted RBP29.49■■■□□ 2.31
KDELC1-201ENST00000376004 WRNQ14191 1432 aaPredicted RBP eCLIP29.47■■■□□ 2.31
KDELC1-201ENST00000376004 CFTRP13569 1480 aa29.44■■■□□ 2.3
KDELC1-201ENST00000376004 SYNJ1O43426 1573 aa29.37■■■□□ 2.29
KDELC1-201ENST00000376004 CADPSQ9ULU8 1353 aa29.3■■■□□ 2.28
KDELC1-201ENST00000376004 PRDM2Q13029 1718 aa29.25■■■□□ 2.27
KDELC1-201ENST00000376004 SOGA1O94964 1423 aa29.24■■■□□ 2.27
KDELC1-201ENST00000376004 TOP2BQ02880 1626 aa29.2■■■□□ 2.26
KDELC1-201ENST00000376004 DNAJC5BQ9UF47 199 aa29.16■■■□□ 2.26
KDELC1-201ENST00000376004 BIVM-ERCC5R4GMW8 1640 aa29.15■■■□□ 2.26
KDELC1-201ENST00000376004 RUSC2Q8N2Y8 1516 aa29.14■■■□□ 2.26
KDELC1-201ENST00000376004 EHMT2Q96KQ7 1210 aa29.12■■■□□ 2.25
KDELC1-201ENST00000376004 CUX1P39880 1505 aa29.11■■■□□ 2.25
KDELC1-201ENST00000376004 EEA1Q15075 1411 aa29.09■■■□□ 2.25
KDELC1-201ENST00000376004 NESP48681 1621 aa29.05■■■□□ 2.24
KDELC1-201ENST00000376004 CSRNP3Q8WYN3 585 aa29■■■□□ 2.23
KDELC1-201ENST00000376004 FANCD2Q9BXW9 1451 aa28.98■■■□□ 2.23
KDELC1-201ENST00000376004 LAMC3Q9Y6N6 1575 aa28.95■■■□□ 2.22
KDELC1-201ENST00000376004 CEP164Q9UPV0 1460 aa28.75■■■□□ 2.19
KDELC1-201ENST00000376004 GOLGA3Q08378 1498 aa28.75■■■□□ 2.19
KDELC1-201ENST00000376004 FGD5Q6ZNL6 1462 aa28.75■■■□□ 2.19
KDELC1-201ENST00000376004 KIF21BO75037 1637 aa28.74■■■□□ 2.19
KDELC1-201ENST00000376004 PDS5BQ9NTI5 1447 aa28.73■■■□□ 2.19
KDELC1-201ENST00000376004 DNMBPQ6XZF7 1577 aa28.73■■■□□ 2.19
KDELC1-201ENST00000376004 TNIKQ9UKE5 1360 aa28.71■■■□□ 2.19
KDELC1-201ENST00000376004 TOPBP1Q92547 1522 aa28.7■■■□□ 2.18
KDELC1-201ENST00000376004 KIF27Q86VH2 1401 aa28.69■■■□□ 2.18
KDELC1-201ENST00000376004 UBTFP17480 764 aaKnown RBP28.66■■■□□ 2.18
KDELC1-201ENST00000376004 KIF21AQ7Z4S6 1674 aa28.65■■■□□ 2.18
KDELC1-201ENST00000376004 PCGF6Q9BYE7 350 aa28.64■■■□□ 2.18
KDELC1-201ENST00000376004 URB2Q14146 1524 aaKnown RBP28.64■■■□□ 2.17
KDELC1-201ENST00000376004 RAPGEF2Q9Y4G8 1499 aa28.61■■■□□ 2.17
KDELC1-201ENST00000376004 CUX2O14529 1486 aa28.6■■■□□ 2.17
KDELC1-201ENST00000376004 CEP162Q5TB80 1403 aa28.6■■■□□ 2.17
KDELC1-201ENST00000376004 POLA1P09884 1462 aaPredicted RBP28.58■■■□□ 2.17
KDELC1-201ENST00000376004 PRXQ9BXM0 1461 aa28.58■■■□□ 2.16
KDELC1-201ENST00000376004 RAD54L2Q9Y4B4 1467 aa28.53■■■□□ 2.16
KDELC1-201ENST00000376004 ERICH3Q5RHP9 1530 aa28.5■■■□□ 2.15
KDELC1-201ENST00000376004 ABCA10Q8WWZ4 1543 aa28.47■■■□□ 2.15
KDELC1-201ENST00000376004 IGF1RP08069 1367 aa28.47■■■□□ 2.15
KDELC1-201ENST00000376004 MRC2Q9UBG0 1479 aa28.37■■■□□ 2.13
KDELC1-201ENST00000376004 WDR97A6NE52 1622 aa28.35■■■□□ 2.13
KDELC1-201ENST00000376004 HRCP23327 699 aa28.35■■■□□ 2.13
KDELC1-201ENST00000376004 CLIP1P30622 1438 aa28.32■■■□□ 2.12
KDELC1-201ENST00000376004 CARMIL1Q5VZK9 1371 aa28.31■■■□□ 2.12
KDELC1-201ENST00000376004 TRIM26Q12899 539 aaPredicted RBP28.3■■■□□ 2.12
KDELC1-201ENST00000376004 TARBP1Q13395 1621 aaKnown RBP28.25■■■□□ 2.11
KDELC1-201ENST00000376004 TDRD9Q8NDG6 1382 aaKnown RBP28.24■■■□□ 2.11
KDELC1-201ENST00000376004 ABCA5Q8WWZ7 1642 aa28.22■■■□□ 2.11
KDELC1-201ENST00000376004 RANGAP1P46060 587 aaPredicted RBP28.21■■■□□ 2.11
KDELC1-201ENST00000376004 WDR62O43379 1518 aa28.21■■■□□ 2.11
KDELC1-201ENST00000376004 ERCC6Q03468 1493 aa28.2■■■□□ 2.1
KDELC1-201ENST00000376004 PPARGC1BQ86YN6 1023 aaKnown RBP28.18■■■□□ 2.1
KDELC1-201ENST00000376004 GAPVD1Q14C86 1478 aa28.17■■■□□ 2.1
KDELC1-201ENST00000376004 CUL7Q14999 1698 aa28.14■■■□□ 2.1
KDELC1-201ENST00000376004 VPS8Q8N3P4 1428 aa28.09■■■□□ 2.09
KDELC1-201ENST00000376004 THOC2Q8NI27 1593 aaKnown RBP28.09■■■□□ 2.09
KDELC1-201ENST00000376004 ARAP1Q96P48 1450 aa28.04■■■□□ 2.08
KDELC1-201ENST00000376004 IFT140Q96RY7 1462 aa28.04■■■□□ 2.08
KDELC1-201ENST00000376004 AQRO60306 1485 aaKnown RBP eCLIP28.02■■■□□ 2.08
KDELC1-201ENST00000376004 ARHGAP35Q9NRY4 1499 aa27.99■■■□□ 2.07
KDELC1-201ENST00000376004 PBRM1Q86U86 1689 aa27.97■■■□□ 2.07
KDELC1-201ENST00000376004 ZNF608Q9ULD9 1512 aaPredicted RBP27.97■■■□□ 2.07
KDELC1-201ENST00000376004 TTBK1Q5TCY1 1321 aaPredicted RBP27.9■■■□□ 2.06
KDELC1-201ENST00000376004 GRIN2BQ13224 1484 aa27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms