RNA–Protein interactions for RNA: ENST00000346693.8

CD99L2-201, Transcript of CD99 molecule like 2, humanhuman

TSL 1 (best)

Gene CD99L2, Length 4,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD99L2-201ENST00000346693 NISCHQ9Y2I1 1504 aa21.06■□□□□ 0.96
CD99L2-201ENST00000346693 DCAF8L2P0C7V8 631 aa20.68■□□□□ 0.9
CD99L2-201ENST00000346693 SHROOM4Q9ULL8 1493 aa19.01■□□□□ 0.63
CD99L2-201ENST00000346693 SUPT5HO00267 1087 aaKnown RBP18.96■□□□□ 0.63
CD99L2-201ENST00000346693 ABCC9O60706 1549 aa18.28■□□□□ 0.52
CD99L2-201ENST00000346693 EHMT2Q96KQ7 1210 aa17.95■□□□□ 0.46
CD99L2-201ENST00000346693 PABPN1Q86U42 306 aaKnown RBP eCLIP17.94■□□□□ 0.46
CD99L2-201ENST00000346693 FAM9AQ8IZU1 332 aaPredicted RBP17.92■□□□□ 0.46
CD99L2-201ENST00000346693 CCDC180Q9P1Z9 1646 aa17.82■□□□□ 0.44
CD99L2-201ENST00000346693 PELP1Q8IZL8 1130 aaKnown RBP17.69■□□□□ 0.42
CD99L2-201ENST00000346693 TRIM41Q8WV44 630 aa17.69■□□□□ 0.42
CD99L2-201ENST00000346693 HRCP23327 699 aa17.57■□□□□ 0.4
CD99L2-201ENST00000346693 RANGAP1P46060 587 aaPredicted RBP17.52■□□□□ 0.4
CD99L2-201ENST00000346693 APLP2Q06481 763 aa17.51■□□□□ 0.39
CD99L2-201ENST00000346693 ZCCHC6Q5VYS8 1495 aaKnown RBP17.5■□□□□ 0.39
CD99L2-201ENST00000346693 ATP1B4Q9UN42 357 aaPredicted RBP17.42■□□□□ 0.38
CD99L2-201ENST00000346693 TTBK1Q5TCY1 1321 aaPredicted RBP17.31■□□□□ 0.36
CD99L2-201ENST00000346693 UBTFP17480 764 aaKnown RBP17.29■□□□□ 0.36
CD99L2-201ENST00000346693 CHIC1Q5VXU3 224 aa17.28■□□□□ 0.36
CD99L2-201ENST00000346693 PPARGC1BQ86YN6 1023 aaKnown RBP17.19■□□□□ 0.34
CD99L2-201ENST00000346693 MYT1Q01538 1121 aa17.18■□□□□ 0.34
CD99L2-201ENST00000346693 SCRIBQ14160 1630 aa17.18■□□□□ 0.34
CD99L2-201ENST00000346693 PCGF6Q9BYE7 350 aa17.17■□□□□ 0.34
CD99L2-201ENST00000346693 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.11■□□□□ 0.33
CD99L2-201ENST00000346693 HNRNPUL2Q1KMD3 747 aaKnown RBP17.11■□□□□ 0.33
CD99L2-201ENST00000346693 FBLN2P98095 1184 aa17.08■□□□□ 0.33
CD99L2-201ENST00000346693 MYT1LQ9UL68 1186 aa17.07■□□□□ 0.32
CD99L2-201ENST00000346693 RB1CC1Q8TDY2 1594 aa17.02■□□□□ 0.32
CD99L2-201ENST00000346693 LOC105371045A0A1W2PR82 267 aa16.99■□□□□ 0.31
CD99L2-201ENST00000346693 NACADO15069 1562 aa16.97■□□□□ 0.31
CD99L2-201ENST00000346693 DCAF1Q9Y4B6 1507 aa16.9■□□□□ 0.3
CD99L2-201ENST00000346693 SCAF1Q9H7N4 1312 aaKnown RBP16.81■□□□□ 0.28
CD99L2-201ENST00000346693 CCER1Q8TC90 406 aaPredicted RBP16.8■□□□□ 0.28
CD99L2-201ENST00000346693 ZEB1P37275 1124 aaPredicted RBP16.79■□□□□ 0.28
CD99L2-201ENST00000346693 TRIM26Q12899 539 aaPredicted RBP16.76■□□□□ 0.27
CD99L2-201ENST00000346693 MYO15BQ96JP2 1530 aa16.69■□□□□ 0.26
CD99L2-201ENST00000346693 RSF1Q96T23 1441 aaPredicted RBP16.66■□□□□ 0.26
CD99L2-201ENST00000346693 CSRNP3Q8WYN3 585 aa16.57■□□□□ 0.24
CD99L2-201ENST00000346693 NPM1P06748 294 aaKnown RBP eCLIP16.52■□□□□ 0.24
CD99L2-201ENST00000346693 ERCC6Q03468 1493 aa16.5■□□□□ 0.23
CD99L2-201ENST00000346693 ITGAEP38570 1179 aa16.5■□□□□ 0.23
CD99L2-201ENST00000346693 BAZ1AQ9NRL2 1556 aaPredicted RBP16.47■□□□□ 0.23
CD99L2-201ENST00000346693 CECR2Q9BXF3 1484 aa16.46■□□□□ 0.23
CD99L2-201ENST00000346693 CHMP7Q8WUX9 453 aaPredicted RBP16.42■□□□□ 0.22
CD99L2-201ENST00000346693 BAZ1BQ9UIG0 1483 aaKnown RBP16.42■□□□□ 0.22
CD99L2-201ENST00000346693 ARID3CA6NKF2 412 aa16.42■□□□□ 0.22
CD99L2-201ENST00000346693 ACIN1Q9UKV3 1341 aaKnown RBP16.36■□□□□ 0.21
CD99L2-201ENST00000346693 P3H3Q8IVL6 736 aa16.36■□□□□ 0.21
CD99L2-201ENST00000346693 GTF3C3Q9Y5Q9 886 aa16.29■□□□□ 0.2
CD99L2-201ENST00000346693 FAM50AQ14320 339 aaKnown RBP16.27■□□□□ 0.2
CD99L2-201ENST00000346693 MROH2BQ7Z745 1585 aa16.27■□□□□ 0.2
CD99L2-201ENST00000346693 CENPBP07199 599 aaPredicted RBP16.27■□□□□ 0.2
CD99L2-201ENST00000346693 PLPPR3Q6T4P5 718 aa16.26■□□□□ 0.19
CD99L2-201ENST00000346693 NEUROD1Q13562 356 aa16.25■□□□□ 0.19
CD99L2-201ENST00000346693 ESF1Q9H501 851 aaKnown RBP16.24■□□□□ 0.19
CD99L2-201ENST00000346693 WRNQ14191 1432 aaPredicted RBP eCLIP16.21■□□□□ 0.19
CD99L2-201ENST00000346693 TRHP20396 242 aaPredicted RBP16.2■□□□□ 0.18
CD99L2-201ENST00000346693 CDK11AQ9UQ88 783 aaPredicted RBP16.17■□□□□ 0.18
CD99L2-201ENST00000346693 EEA1Q15075 1411 aa16.16■□□□□ 0.18
CD99L2-201ENST00000346693 ZNF777Q9ULD5 760 aaPredicted RBP16.15■□□□□ 0.18
CD99L2-201ENST00000346693 SMARCA2P51531 1590 aa16.14■□□□□ 0.17
CD99L2-201ENST00000346693 BCANQ96GW7 911 aa16.12■□□□□ 0.17
CD99L2-201ENST00000346693 CCDC88BA6NC98 1476 aa16.09■□□□□ 0.17
CD99L2-201ENST00000346693 TRIM52Q96A61 297 aa16.06■□□□□ 0.16
CD99L2-201ENST00000346693 WIZO95785 1651 aa16.03■□□□□ 0.16
CD99L2-201ENST00000346693 KIF27Q86VH2 1401 aa16.03■□□□□ 0.16
CD99L2-201ENST00000346693 TOP2AP11388 1531 aaKnown RBP16.02■□□□□ 0.15
CD99L2-201ENST00000346693 SLC4A1APQ9BWU0 796 aaKnown RBP16.02■□□□□ 0.15
CD99L2-201ENST00000346693 POLR3GLQ9BT43 218 aa16.01■□□□□ 0.15
CD99L2-201ENST00000346693 GOLGA3Q08378 1498 aa16.01■□□□□ 0.15
CD99L2-201ENST00000346693 CLIP1P30622 1438 aa16■□□□□ 0.15
CD99L2-201ENST00000346693 PDS5BQ9NTI5 1447 aa16■□□□□ 0.15
CD99L2-201ENST00000346693 KCNH8Q96L42 1107 aa15.99■□□□□ 0.15
CD99L2-201ENST00000346693 SMARCA4P51532 1647 aa15.98■□□□□ 0.15
CD99L2-201ENST00000346693 ATAD2BQ9ULI0 1458 aa15.97■□□□□ 0.15
CD99L2-201ENST00000346693 YTHDC1Q96MU7 727 aaKnown RBP15.96■□□□□ 0.15
CD99L2-201ENST00000346693 UNC13AQ9UPW8 1703 aa15.94■□□□□ 0.14
CD99L2-201ENST00000346693 CEP164Q9UPV0 1460 aa15.93■□□□□ 0.14
CD99L2-201ENST00000346693 DIEXFQ68CQ4 756 aaKnown RBP15.93■□□□□ 0.14
CD99L2-201ENST00000346693 STAG3Q9UJ98 1225 aa15.93■□□□□ 0.14
CD99L2-201ENST00000346693 CEP162Q5TB80 1403 aa15.92■□□□□ 0.14
CD99L2-201ENST00000346693 TNIKQ9UKE5 1360 aa15.92■□□□□ 0.14
CD99L2-201ENST00000346693 ARID4BQ4LE39 1312 aaPredicted RBP15.89■□□□□ 0.13
CD99L2-201ENST00000346693 BCL11AQ9H165 835 aa15.89■□□□□ 0.13
CD99L2-201ENST00000346693 BICRAQ9NZM4 1560 aa15.88■□□□□ 0.13
CD99L2-201ENST00000346693 SOGA1O94964 1423 aa15.86■□□□□ 0.13
CD99L2-201ENST00000346693 ABCC8Q09428 1581 aa15.86■□□□□ 0.13
CD99L2-201ENST00000346693 CADPSQ9ULU8 1353 aa15.84■□□□□ 0.13
CD99L2-201ENST00000346693 CUX2O14529 1486 aa15.83■□□□□ 0.13
CD99L2-201ENST00000346693 MTUS2Q5JR59 1369 aa15.82■□□□□ 0.12
CD99L2-201ENST00000346693 CHGAP10645 457 aaKnown RBP15.82■□□□□ 0.12
CD99L2-201ENST00000346693 PLEKHD1A6NEE1 506 aa15.81■□□□□ 0.12
CD99L2-201ENST00000346693 NEFLP07196 543 aa15.79■□□□□ 0.12
CD99L2-201ENST00000346693 CARMIL1Q5VZK9 1371 aa15.79■□□□□ 0.12
CD99L2-201ENST00000346693 CNGB1Q14028 1251 aaPredicted RBP15.78■□□□□ 0.12
CD99L2-201ENST00000346693 ZNF326Q5BKZ1 582 aaKnown RBP15.77■□□□□ 0.12
CD99L2-201ENST00000346693 OSCARQ8IYS5 282 aa15.73■□□□□ 0.11
CD99L2-201ENST00000346693 TSPY4P0CV99 314 aa15.72■□□□□ 0.11
CD99L2-201ENST00000346693 TSPY10P0CW01 314 aa15.72■□□□□ 0.11
CD99L2-201ENST00000346693 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms