RNA–Protein interactions for RNA: ENST00000424135.5

PLOD3-204, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 5

Gene PLOD3, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-204ENST00000424135 NISCHQ9Y2I1 1504 aa29.74■■■□□ 2.35
PLOD3-204ENST00000424135 ABCC9O60706 1549 aa26.95■■□□□ 1.91
PLOD3-204ENST00000424135 CCDC180Q9P1Z9 1646 aa26.65■■□□□ 1.86
PLOD3-204ENST00000424135 DNAJC5BQ9UF47 199 aa25.54■■□□□ 1.68
PLOD3-204ENST00000424135 RB1CC1Q8TDY2 1594 aa25.46■■□□□ 1.67
PLOD3-204ENST00000424135 NACADO15069 1562 aa25.26■■□□□ 1.63
PLOD3-204ENST00000424135 DCAF8L2P0C7V8 631 aa25.23■■□□□ 1.63
PLOD3-204ENST00000424135 PABPN1Q86U42 306 aaKnown RBP eCLIP25.13■■□□□ 1.61
PLOD3-204ENST00000424135 UNC13AQ9UPW8 1703 aa24.94■■□□□ 1.58
PLOD3-204ENST00000424135 BICRAQ9NZM4 1560 aa24.84■■□□□ 1.57
PLOD3-204ENST00000424135 MYO15BQ96JP2 1530 aa24.83■■□□□ 1.57
PLOD3-204ENST00000424135 ZCCHC6Q5VYS8 1495 aaKnown RBP24.62■■□□□ 1.53
PLOD3-204ENST00000424135 DCAF1Q9Y4B6 1507 aa24.48■■□□□ 1.51
PLOD3-204ENST00000424135 SCRIBQ14160 1630 aa24.39■■□□□ 1.5
PLOD3-204ENST00000424135 SHROOM4Q9ULL8 1493 aa24.31■■□□□ 1.48
PLOD3-204ENST00000424135 CC2D2AQ9P2K1 1620 aa24.29■■□□□ 1.48
PLOD3-204ENST00000424135 CECR2Q9BXF3 1484 aa24.26■■□□□ 1.47
PLOD3-204ENST00000424135 EIF4G1Q04637 1599 aaKnown RBP24.2■■□□□ 1.46
PLOD3-204ENST00000424135 DNAJC5Q9H3Z4 198 aa23.59■■□□□ 1.37
PLOD3-204ENST00000424135 NCAPD3P42695 1498 aa23.37■■□□□ 1.33
PLOD3-204ENST00000424135 ATAD2BQ9ULI0 1458 aa23.31■■□□□ 1.32
PLOD3-204ENST00000424135 SMARCA4P51532 1647 aa23.22■■□□□ 1.31
PLOD3-204ENST00000424135 ERCC6Q03468 1493 aa23.2■■□□□ 1.3
PLOD3-204ENST00000424135 CUX2O14529 1486 aa23.17■■□□□ 1.3
PLOD3-204ENST00000424135 SMARCA2P51531 1590 aa23.15■■□□□ 1.3
PLOD3-204ENST00000424135 NESP48681 1621 aa23.15■■□□□ 1.3
PLOD3-204ENST00000424135 HMGXB3Q12766 1538 aa23.14■■□□□ 1.3
PLOD3-204ENST00000424135 BAZ1AQ9NRL2 1556 aaPredicted RBP23.04■■□□□ 1.28
PLOD3-204ENST00000424135 BAZ1BQ9UIG0 1483 aaKnown RBP23.04■■□□□ 1.28
PLOD3-204ENST00000424135 MROH2BQ7Z745 1585 aa22.97■■□□□ 1.27
PLOD3-204ENST00000424135 PEG3Q9GZU2 1588 aa22.96■■□□□ 1.27
PLOD3-204ENST00000424135 THOC2Q8NI27 1593 aaKnown RBP22.86■■□□□ 1.25
PLOD3-204ENST00000424135 LAMC3Q9Y6N6 1575 aa22.8■■□□□ 1.24
PLOD3-204ENST00000424135 KIF21AQ7Z4S6 1674 aa22.75■■□□□ 1.23
PLOD3-204ENST00000424135 PDS5BQ9NTI5 1447 aa22.7■■□□□ 1.22
PLOD3-204ENST00000424135 WIZO95785 1651 aa22.67■■□□□ 1.22
PLOD3-204ENST00000424135 CADPSQ9ULU8 1353 aa22.66■■□□□ 1.22
PLOD3-204ENST00000424135 MRC2Q9UBG0 1479 aa22.54■■□□□ 1.2
PLOD3-204ENST00000424135 WDR62O43379 1518 aa22.5■■□□□ 1.19
PLOD3-204ENST00000424135 RSF1Q96T23 1441 aaPredicted RBP22.43■■□□□ 1.18
PLOD3-204ENST00000424135 CEP164Q9UPV0 1460 aa22.41■■□□□ 1.18
PLOD3-204ENST00000424135 FANCD2Q9BXW9 1451 aa22.41■■□□□ 1.18
PLOD3-204ENST00000424135 TRIM41Q8WV44 630 aa22.38■■□□□ 1.17
PLOD3-204ENST00000424135 CFTRP13569 1480 aa22.37■■□□□ 1.17
PLOD3-204ENST00000424135 TOP2AP11388 1531 aaKnown RBP22.31■■□□□ 1.16
PLOD3-204ENST00000424135 URB2Q14146 1524 aaKnown RBP22.28■■□□□ 1.16
PLOD3-204ENST00000424135 OSCARQ8IYS5 282 aa22.14■■□□□ 1.13
PLOD3-204ENST00000424135 CCDC88BA6NC98 1476 aa22.14■■□□□ 1.13
PLOD3-204ENST00000424135 ZNF608Q9ULD9 1512 aaPredicted RBP22.06■■□□□ 1.12
PLOD3-204ENST00000424135 PRDM2Q13029 1718 aa22.03■■□□□ 1.12
PLOD3-204ENST00000424135 TOPBP1Q92547 1522 aa21.98■■□□□ 1.11
PLOD3-204ENST00000424135 IFT140Q96RY7 1462 aa21.96■■□□□ 1.11
PLOD3-204ENST00000424135 RIMBP3CA6NJZ7 1639 aa21.88■■□□□ 1.09
PLOD3-204ENST00000424135 RIMBP3BA6NNM3 1639 aa21.88■■□□□ 1.09
PLOD3-204ENST00000424135 RIMBP3Q9UFD9 1639 aa21.88■■□□□ 1.09
PLOD3-204ENST00000424135 EIF4G3O43432 1585 aaKnown RBP21.84■■□□□ 1.09
PLOD3-204ENST00000424135 DNMBPQ6XZF7 1577 aa21.84■■□□□ 1.09
PLOD3-204ENST00000424135 AQRO60306 1485 aaKnown RBP eCLIP21.83■■□□□ 1.081e-6■■■■□ 23.2
PLOD3-204ENST00000424135 ARHGEF11O15085 1522 aa21.8■■□□□ 1.08
PLOD3-204ENST00000424135 ABCC8Q09428 1581 aa21.8■■□□□ 1.08
PLOD3-204ENST00000424135 TARBP1Q13395 1621 aaKnown RBP21.79■■□□□ 1.08
PLOD3-204ENST00000424135 POLA1P09884 1462 aaPredicted RBP21.76■■□□□ 1.07
PLOD3-204ENST00000424135 RAD54L2Q9Y4B4 1467 aa21.74■■□□□ 1.07
PLOD3-204ENST00000424135 CHD1O14646 1710 aa21.7■■□□□ 1.06
PLOD3-204ENST00000424135 CYB5RLQ6IPT4 315 aa21.7■■□□□ 1.06
PLOD3-204ENST00000424135 FBLN2P98095 1184 aa21.68■■□□□ 1.06
PLOD3-204ENST00000424135 TDRD9Q8NDG6 1382 aaKnown RBP21.67■■□□□ 1.06
PLOD3-204ENST00000424135 SOGA1O94964 1423 aa21.64■■□□□ 1.06
PLOD3-204ENST00000424135 ARAP1Q96P48 1450 aa21.62■■□□□ 1.05
PLOD3-204ENST00000424135 FGD5Q6ZNL6 1462 aa21.59■■□□□ 1.05
PLOD3-204ENST00000424135 CUX1P39880 1505 aa21.58■■□□□ 1.04
PLOD3-204ENST00000424135 SNAPC4Q5SXM2 1469 aa21.56■■□□□ 1.04
PLOD3-204ENST00000424135 CLASP1Q7Z460 1538 aa21.47■■□□□ 1.03
PLOD3-204ENST00000424135 TRHP20396 242 aaPredicted RBP21.46■■□□□ 1.03
PLOD3-204ENST00000424135 CHMP7Q8WUX9 453 aaPredicted RBP21.46■■□□□ 1.03
PLOD3-204ENST00000424135 GRIN2BQ13224 1484 aa21.44■■□□□ 1.02
PLOD3-204ENST00000424135 MAGI1Q96QZ7 1491 aaPredicted RBP21.43■■□□□ 1.02
PLOD3-204ENST00000424135 WDR97A6NE52 1622 aa21.42■■□□□ 1.02
PLOD3-204ENST00000424135 SYNJ2O15056 1496 aa21.39■■□□□ 1.01
PLOD3-204ENST00000424135 SYNJ1O43426 1573 aa21.37■■□□□ 1.01
PLOD3-204ENST00000424135 SUPT5HO00267 1087 aaKnown RBP21.37■■□□□ 1.01
PLOD3-204ENST00000424135 GAPVD1Q14C86 1478 aa21.36■■□□□ 1.01
PLOD3-204ENST00000424135 PBRM1Q86U86 1689 aa21.32■■□□□ 1
PLOD3-204ENST00000424135 ABCA10Q8WWZ4 1543 aa21.31■■□□□ 1
PLOD3-204ENST00000424135 ABCA5Q8WWZ7 1642 aa21.29■■□□□ 1
PLOD3-204ENST00000424135 ERCC6L2Q5T890 1561 aa21.23■□□□□ 0.99
PLOD3-204ENST00000424135 WRNQ14191 1432 aaPredicted RBP eCLIP21.18■□□□□ 0.98
PLOD3-204ENST00000424135 GRIN2AQ12879 1464 aa21.18■□□□□ 0.98
PLOD3-204ENST00000424135 ADAMTS12P58397 1594 aa21.14■□□□□ 0.98
PLOD3-204ENST00000424135 CEP170Q5SW79 1584 aa21.14■□□□□ 0.98
PLOD3-204ENST00000424135 NUP160Q12769 1436 aa21.12■□□□□ 0.97
PLOD3-204ENST00000424135 TOP2BQ02880 1626 aa21.12■□□□□ 0.97
PLOD3-204ENST00000424135 BIVM-ERCC5R4GMW8 1640 aa21.11■□□□□ 0.97
PLOD3-204ENST00000424135 FHAD1B1AJZ9 1412 aa21.07■□□□□ 0.96
PLOD3-204ENST00000424135 AEBP2Q6ZN18 517 aaPredicted RBP21.02■□□□□ 0.96
PLOD3-204ENST00000424135 SHROOM2Q13796 1616 aa21.02■□□□□ 0.96
PLOD3-204ENST00000424135 ERICH3Q5RHP9 1530 aa21■□□□□ 0.95
PLOD3-204ENST00000424135 PRG4Q92954 1404 aaPredicted RBP20.95■□□□□ 0.94
PLOD3-204ENST00000424135 JPH4Q96JJ6 628 aa20.92■□□□□ 0.94
PLOD3-204ENST00000424135 RUSC2Q8N2Y8 1516 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms