RNA–Protein interactions for RNA: ENST00000506578.5

LEMD2-206, Transcript of LEM domain containing 2, humanhuman

TSL 5

Gene LEMD2, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD2-206ENST00000506578 NISCHQ9Y2I1 1504 aa41.39■■■■■ 4.22
LEMD2-206ENST00000506578 CCDC180Q9P1Z9 1646 aa36.66■■■■□ 3.46
LEMD2-206ENST00000506578 ABCC9O60706 1549 aa35.77■■■■□ 3.32
LEMD2-206ENST00000506578 DCAF8L2P0C7V8 631 aa34.74■■■■□ 3.15
LEMD2-206ENST00000506578 ZCCHC6Q5VYS8 1495 aaKnown RBP34.51■■■■□ 3.12
LEMD2-206ENST00000506578 RB1CC1Q8TDY2 1594 aa34.45■■■■□ 3.11
LEMD2-206ENST00000506578 NACADO15069 1562 aa34.43■■■■□ 3.1
LEMD2-206ENST00000506578 MYO15BQ96JP2 1530 aa34.22■■■■□ 3.07
LEMD2-206ENST00000506578 DCAF1Q9Y4B6 1507 aa34.18■■■■□ 3.06
LEMD2-206ENST00000506578 UNC13AQ9UPW8 1703 aa33.65■■■□□ 2.98
LEMD2-206ENST00000506578 SCRIBQ14160 1630 aa33.59■■■□□ 2.97
LEMD2-206ENST00000506578 PABPN1Q86U42 306 aaKnown RBP eCLIP33.52■■■□□ 2.966e-9■□□□□ 10.2
LEMD2-206ENST00000506578 BICRAQ9NZM4 1560 aa33.34■■■□□ 2.93
LEMD2-206ENST00000506578 SHROOM4Q9ULL8 1493 aa33.02■■■□□ 2.88
LEMD2-206ENST00000506578 DNAJC5BQ9UF47 199 aa32.56■■■□□ 2.8
LEMD2-206ENST00000506578 EIF4G1Q04637 1599 aaKnown RBP32.49■■■□□ 2.79
LEMD2-206ENST00000506578 CC2D2AQ9P2K1 1620 aa32.32■■■□□ 2.76
LEMD2-206ENST00000506578 CECR2Q9BXF3 1484 aa32.25■■■□□ 2.75
LEMD2-206ENST00000506578 BAZ1AQ9NRL2 1556 aaPredicted RBP32.09■■■□□ 2.73
LEMD2-206ENST00000506578 SMARCA4P51532 1647 aa32.08■■■□□ 2.73
LEMD2-206ENST00000506578 MROH2BQ7Z745 1585 aa31.93■■■□□ 2.7
LEMD2-206ENST00000506578 ATAD2BQ9ULI0 1458 aa31.84■■■□□ 2.69
LEMD2-206ENST00000506578 SMARCA2P51531 1590 aa31.83■■■□□ 2.69
LEMD2-206ENST00000506578 NCAPD3P42695 1498 aa31.75■■■□□ 2.67
LEMD2-206ENST00000506578 PEG3Q9GZU2 1588 aa31.69■■■□□ 2.66
LEMD2-206ENST00000506578 BAZ1BQ9UIG0 1483 aaKnown RBP31.65■■■□□ 2.66
LEMD2-206ENST00000506578 RSF1Q96T23 1441 aaPredicted RBP31.64■■■□□ 2.66
LEMD2-206ENST00000506578 HMGXB3Q12766 1538 aa31.62■■■□□ 2.65
LEMD2-206ENST00000506578 WIZO95785 1651 aa31.62■■■□□ 2.65
LEMD2-206ENST00000506578 TOP2AP11388 1531 aaKnown RBP31.27■■■□□ 2.6
LEMD2-206ENST00000506578 SUPT5HO00267 1087 aaKnown RBP31.22■■■□□ 2.59
LEMD2-206ENST00000506578 NESP48681 1621 aa31■■■□□ 2.55
LEMD2-206ENST00000506578 CCDC88BA6NC98 1476 aa30.92■■■□□ 2.54
LEMD2-206ENST00000506578 LAMC3Q9Y6N6 1575 aa30.91■■■□□ 2.54
LEMD2-206ENST00000506578 CADPSQ9ULU8 1353 aa30.89■■■□□ 2.54
LEMD2-206ENST00000506578 ERCC6Q03468 1493 aa30.86■■■□□ 2.53
LEMD2-206ENST00000506578 PDS5BQ9NTI5 1447 aa30.74■■■□□ 2.51
LEMD2-206ENST00000506578 CFTRP13569 1480 aa30.73■■■□□ 2.51
LEMD2-206ENST00000506578 KIF21AQ7Z4S6 1674 aa30.63■■■□□ 2.49
LEMD2-206ENST00000506578 FANCD2Q9BXW9 1451 aa30.56■■■□□ 2.48
LEMD2-206ENST00000506578 PRDM2Q13029 1718 aa30.52■■■□□ 2.48
LEMD2-206ENST00000506578 CEP164Q9UPV0 1460 aa30.51■■■□□ 2.47
LEMD2-206ENST00000506578 THOC2Q8NI27 1593 aaKnown RBP30.41■■■□□ 2.46
LEMD2-206ENST00000506578 MRC2Q9UBG0 1479 aa30.39■■■□□ 2.46
LEMD2-206ENST00000506578 CUX2O14529 1486 aa30.32■■■□□ 2.44
LEMD2-206ENST00000506578 WDR62O43379 1518 aa30.24■■■□□ 2.43
LEMD2-206ENST00000506578 URB2Q14146 1524 aaKnown RBP30.21■■■□□ 2.43
LEMD2-206ENST00000506578 ABCC8Q09428 1581 aa30.08■■■□□ 2.41
LEMD2-206ENST00000506578 TOPBP1Q92547 1522 aa30.08■■■□□ 2.41
LEMD2-206ENST00000506578 DNMBPQ6XZF7 1577 aa30.06■■■□□ 2.4
LEMD2-206ENST00000506578 CUX1P39880 1505 aa29.93■■■□□ 2.38
LEMD2-206ENST00000506578 WRNQ14191 1432 aaPredicted RBP eCLIP29.87■■■□□ 2.37
LEMD2-206ENST00000506578 POLA1P09884 1462 aaPredicted RBP29.85■■■□□ 2.37
LEMD2-206ENST00000506578 IFT140Q96RY7 1462 aa29.83■■■□□ 2.37
LEMD2-206ENST00000506578 FGD5Q6ZNL6 1462 aa29.83■■■□□ 2.37
LEMD2-206ENST00000506578 SOGA1O94964 1423 aa29.76■■■□□ 2.36
LEMD2-206ENST00000506578 SYNJ1O43426 1573 aa29.76■■■□□ 2.35
LEMD2-206ENST00000506578 RAD54L2Q9Y4B4 1467 aa29.75■■■□□ 2.35
LEMD2-206ENST00000506578 TOP2BQ02880 1626 aa29.73■■■□□ 2.35
LEMD2-206ENST00000506578 BIVM-ERCC5R4GMW8 1640 aa29.71■■■□□ 2.35
LEMD2-206ENST00000506578 TARBP1Q13395 1621 aaKnown RBP29.7■■■□□ 2.34
LEMD2-206ENST00000506578 ZNF608Q9ULD9 1512 aaPredicted RBP29.69■■■□□ 2.34
LEMD2-206ENST00000506578 TDRD9Q8NDG6 1382 aaKnown RBP29.59■■■□□ 2.33
LEMD2-206ENST00000506578 AQRO60306 1485 aaKnown RBP eCLIP29.58■■■□□ 2.33
LEMD2-206ENST00000506578 EIF4G3O43432 1585 aaKnown RBP29.58■■■□□ 2.33
LEMD2-206ENST00000506578 ABCA10Q8WWZ4 1543 aa29.5■■■□□ 2.31
LEMD2-206ENST00000506578 WDR97A6NE52 1622 aa29.49■■■□□ 2.31
LEMD2-206ENST00000506578 TRIM41Q8WV44 630 aa29.44■■■□□ 2.3
LEMD2-206ENST00000506578 GAPVD1Q14C86 1478 aa29.41■■■□□ 2.3
LEMD2-206ENST00000506578 GRIN2BQ13224 1484 aa29.37■■■□□ 2.29
LEMD2-206ENST00000506578 ABCA5Q8WWZ7 1642 aa29.35■■■□□ 2.29
LEMD2-206ENST00000506578 FBLN2P98095 1184 aa29.32■■■□□ 2.28
LEMD2-206ENST00000506578 PBRM1Q86U86 1689 aa29.32■■■□□ 2.28
LEMD2-206ENST00000506578 SNAPC4Q5SXM2 1469 aa29.31■■■□□ 2.28
LEMD2-206ENST00000506578 MAGI1Q96QZ7 1491 aaPredicted RBP29.24■■■□□ 2.27
LEMD2-206ENST00000506578 KIF27Q86VH2 1401 aa29.24■■■□□ 2.27
LEMD2-206ENST00000506578 DNAJC5Q9H3Z4 198 aa29.22■■■□□ 2.27
LEMD2-206ENST00000506578 CHMP7Q8WUX9 453 aaPredicted RBP29.21■■■□□ 2.27
LEMD2-206ENST00000506578 OSCARQ8IYS5 282 aa29.21■■■□□ 2.27
LEMD2-206ENST00000506578 CHD1O14646 1710 aa29.18■■■□□ 2.26
LEMD2-206ENST00000506578 CHIC1Q5VXU3 224 aa29.16■■■□□ 2.26
LEMD2-206ENST00000506578 ERICH3Q5RHP9 1530 aa29.16■■■□□ 2.26
LEMD2-206ENST00000506578 SYNJ2O15056 1496 aa29.14■■■□□ 2.25
LEMD2-206ENST00000506578 ADAMTS12P58397 1594 aa29.08■■■□□ 2.25
LEMD2-206ENST00000506578 FHAD1B1AJZ9 1412 aa29.07■■■□□ 2.24
LEMD2-206ENST00000506578 IGF1RP08069 1367 aa29.05■■■□□ 2.24
LEMD2-206ENST00000506578 RUSC2Q8N2Y8 1516 aa29.03■■■□□ 2.24
LEMD2-206ENST00000506578 GRIN2AQ12879 1464 aa28.98■■■□□ 2.23
LEMD2-206ENST00000506578 CUL7Q14999 1698 aa28.97■■■□□ 2.23
LEMD2-206ENST00000506578 CARMIL1Q5VZK9 1371 aa28.93■■■□□ 2.22
LEMD2-206ENST00000506578 FAM9AQ8IZU1 332 aaPredicted RBP28.89■■■□□ 2.21
LEMD2-206ENST00000506578 CEP170Q5SW79 1584 aa28.81■■■□□ 2.2
LEMD2-206ENST00000506578 EEA1Q15075 1411 aa28.8■■■□□ 2.2
LEMD2-206ENST00000506578 CLASP1Q7Z460 1538 aa28.8■■■□□ 2.2
LEMD2-206ENST00000506578 CSRNP3Q8WYN3 585 aa28.8■■■□□ 2.2
LEMD2-206ENST00000506578 NUP160Q12769 1436 aa28.8■■■□□ 2.2
LEMD2-206ENST00000506578 RAPGEF2Q9Y4G8 1499 aa28.77■■■□□ 2.2
LEMD2-206ENST00000506578 ARHGEF11O15085 1522 aa28.68■■■□□ 2.18
LEMD2-206ENST00000506578 PRXQ9BXM0 1461 aa28.67■■■□□ 2.18
LEMD2-206ENST00000506578 RIMBP3CA6NJZ7 1639 aa28.66■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms