RNA–Protein interactions for RNA: ENST00000527653.1

GPAA1-209, Transcript of glycosylphosphatidylinositol anchor attachment 1, humanhuman

TSL 2

Gene GPAA1, Length 856 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPAA1-209ENST00000527653 NISCHQ9Y2I1 1504 aa46.23■■■■■ 4.99
GPAA1-209ENST00000527653 CCDC180Q9P1Z9 1646 aa41.18■■■■■ 4.18
GPAA1-209ENST00000527653 ABCC9O60706 1549 aa40.11■■■■■ 4.01
GPAA1-209ENST00000527653 RB1CC1Q8TDY2 1594 aa38.72■■■■□ 3.79
GPAA1-209ENST00000527653 DCAF8L2P0C7V8 631 aa38.65■■■■□ 3.78
GPAA1-209ENST00000527653 NACADO15069 1562 aa38.65■■■■□ 3.78
GPAA1-209ENST00000527653 ZCCHC6Q5VYS8 1495 aaKnown RBP38.54■■■■□ 3.76
GPAA1-209ENST00000527653 MYO15BQ96JP2 1530 aa38.4■■■■□ 3.74
GPAA1-209ENST00000527653 DCAF1Q9Y4B6 1507 aa38.27■■■■□ 3.72
GPAA1-209ENST00000527653 UNC13AQ9UPW8 1703 aa37.79■■■■□ 3.64
GPAA1-209ENST00000527653 SCRIBQ14160 1630 aa37.55■■■■□ 3.6
GPAA1-209ENST00000527653 PABPN1Q86U42 306 aaKnown RBP eCLIP37.43■■■■□ 3.58
GPAA1-209ENST00000527653 BICRAQ9NZM4 1560 aa37.38■■■■□ 3.57
GPAA1-209ENST00000527653 SHROOM4Q9ULL8 1493 aa37.15■■■■□ 3.54
GPAA1-209ENST00000527653 DNAJC5BQ9UF47 199 aa36.51■■■■□ 3.44
GPAA1-209ENST00000527653 EIF4G1Q04637 1599 aaKnown RBP36.48■■■■□ 3.43
GPAA1-209ENST00000527653 CC2D2AQ9P2K1 1620 aa36.3■■■■□ 3.4
GPAA1-209ENST00000527653 CECR2Q9BXF3 1484 aa36.05■■■■□ 3.36
GPAA1-209ENST00000527653 BAZ1AQ9NRL2 1556 aaPredicted RBP35.91■■■■□ 3.34
GPAA1-209ENST00000527653 SMARCA4P51532 1647 aa35.9■■■■□ 3.34
GPAA1-209ENST00000527653 SMARCA2P51531 1590 aa35.68■■■■□ 3.3
GPAA1-209ENST00000527653 ATAD2BQ9ULI0 1458 aa35.61■■■■□ 3.29
GPAA1-209ENST00000527653 MROH2BQ7Z745 1585 aa35.59■■■■□ 3.29
GPAA1-209ENST00000527653 NCAPD3P42695 1498 aa35.57■■■■□ 3.28
GPAA1-209ENST00000527653 PEG3Q9GZU2 1588 aa35.51■■■■□ 3.27
GPAA1-209ENST00000527653 HMGXB3Q12766 1538 aa35.49■■■■□ 3.27
GPAA1-209ENST00000527653 BAZ1BQ9UIG0 1483 aaKnown RBP35.43■■■■□ 3.26
GPAA1-209ENST00000527653 WIZO95785 1651 aa35.27■■■■□ 3.24
GPAA1-209ENST00000527653 RSF1Q96T23 1441 aaPredicted RBP35.21■■■■□ 3.23
GPAA1-209ENST00000527653 TOP2AP11388 1531 aaKnown RBP34.94■■■■□ 3.18
GPAA1-209ENST00000527653 LAMC3Q9Y6N6 1575 aa34.74■■■■□ 3.15
GPAA1-209ENST00000527653 ERCC6Q03468 1493 aa34.69■■■■□ 3.14
GPAA1-209ENST00000527653 NESP48681 1621 aa34.69■■■■□ 3.14
GPAA1-209ENST00000527653 CADPSQ9ULU8 1353 aa34.56■■■■□ 3.12
GPAA1-209ENST00000527653 PDS5BQ9NTI5 1447 aa34.48■■■■□ 3.11
GPAA1-209ENST00000527653 SUPT5HO00267 1087 aaKnown RBP34.47■■■■□ 3.11
GPAA1-209ENST00000527653 CCDC88BA6NC98 1476 aa34.44■■■■□ 3.1
GPAA1-209ENST00000527653 KIF21AQ7Z4S6 1674 aa34.39■■■■□ 3.1
GPAA1-209ENST00000527653 CFTRP13569 1480 aa34.37■■■■□ 3.09
GPAA1-209ENST00000527653 PRDM2Q13029 1718 aa34.3■■■■□ 3.08
GPAA1-209ENST00000527653 CUX2O14529 1486 aa34.22■■■■□ 3.07
GPAA1-209ENST00000527653 CEP164Q9UPV0 1460 aa34.22■■■■□ 3.07
GPAA1-209ENST00000527653 FANCD2Q9BXW9 1451 aa34.21■■■■□ 3.07
GPAA1-209ENST00000527653 THOC2Q8NI27 1593 aaKnown RBP34.21■■■■□ 3.07
GPAA1-209ENST00000527653 MRC2Q9UBG0 1479 aa34.12■■■■□ 3.05
GPAA1-209ENST00000527653 WDR62O43379 1518 aa33.97■■■■□ 3.03
GPAA1-209ENST00000527653 URB2Q14146 1524 aaKnown RBP33.81■■■■□ 3
GPAA1-209ENST00000527653 ABCC8Q09428 1581 aa33.74■■■□□ 2.99
GPAA1-209ENST00000527653 DNMBPQ6XZF7 1577 aa33.68■■■□□ 2.98
GPAA1-209ENST00000527653 TOPBP1Q92547 1522 aa33.66■■■□□ 2.98
GPAA1-209ENST00000527653 IFT140Q96RY7 1462 aa33.46■■■□□ 2.95
GPAA1-209ENST00000527653 CUX1P39880 1505 aa33.41■■■□□ 2.94
GPAA1-209ENST00000527653 POLA1P09884 1462 aaPredicted RBP33.37■■■□□ 2.93
GPAA1-209ENST00000527653 FGD5Q6ZNL6 1462 aa33.33■■■□□ 2.93
GPAA1-209ENST00000527653 WRNQ14191 1432 aaPredicted RBP eCLIP33.28■■■□□ 2.92
GPAA1-209ENST00000527653 TARBP1Q13395 1621 aaKnown RBP33.27■■■□□ 2.92
GPAA1-209ENST00000527653 SOGA1O94964 1423 aa33.25■■■□□ 2.91
GPAA1-209ENST00000527653 BIVM-ERCC5R4GMW8 1640 aa33.22■■■□□ 2.91
GPAA1-209ENST00000527653 TOP2BQ02880 1626 aa33.21■■■□□ 2.91
GPAA1-209ENST00000527653 ZNF608Q9ULD9 1512 aaPredicted RBP33.21■■■□□ 2.91
GPAA1-209ENST00000527653 EIF4G3O43432 1585 aaKnown RBP33.21■■■□□ 2.91
GPAA1-209ENST00000527653 RAD54L2Q9Y4B4 1467 aa33.19■■■□□ 2.9
GPAA1-209ENST00000527653 SYNJ1O43426 1573 aa33.17■■■□□ 2.9
GPAA1-209ENST00000527653 WDR97A6NE52 1622 aa33.13■■■□□ 2.89
GPAA1-209ENST00000527653 AQRO60306 1485 aaKnown RBP eCLIP33.05■■■□□ 2.88
GPAA1-209ENST00000527653 TDRD9Q8NDG6 1382 aaKnown RBP33.01■■■□□ 2.88
GPAA1-209ENST00000527653 ABCA10Q8WWZ4 1543 aa32.99■■■□□ 2.87
GPAA1-209ENST00000527653 DNAJC5Q9H3Z4 198 aa32.93■■■□□ 2.86
GPAA1-209ENST00000527653 PBRM1Q86U86 1689 aa32.9■■■□□ 2.86
GPAA1-209ENST00000527653 GAPVD1Q14C86 1478 aa32.89■■■□□ 2.86
GPAA1-209ENST00000527653 ABCA5Q8WWZ7 1642 aa32.88■■■□□ 2.85
GPAA1-209ENST00000527653 GRIN2BQ13224 1484 aa32.88■■■□□ 2.85
GPAA1-209ENST00000527653 SNAPC4Q5SXM2 1469 aa32.82■■■□□ 2.84
GPAA1-209ENST00000527653 MAGI1Q96QZ7 1491 aaPredicted RBP32.8■■■□□ 2.84
GPAA1-209ENST00000527653 CHD1O14646 1710 aa32.79■■■□□ 2.84
GPAA1-209ENST00000527653 OSCARQ8IYS5 282 aa32.78■■■□□ 2.84
GPAA1-209ENST00000527653 FBLN2P98095 1184 aa32.74■■■□□ 2.83
GPAA1-209ENST00000527653 CHMP7Q8WUX9 453 aaPredicted RBP32.66■■■□□ 2.82
GPAA1-209ENST00000527653 SYNJ2O15056 1496 aa32.66■■■□□ 2.82
GPAA1-209ENST00000527653 ERICH3Q5RHP9 1530 aa32.65■■■□□ 2.82
GPAA1-209ENST00000527653 KIF27Q86VH2 1401 aa32.61■■■□□ 2.81
GPAA1-209ENST00000527653 ADAMTS12P58397 1594 aa32.58■■■□□ 2.81
GPAA1-209ENST00000527653 TRIM41Q8WV44 630 aa32.58■■■□□ 2.81
GPAA1-209ENST00000527653 FHAD1B1AJZ9 1412 aa32.51■■■□□ 2.8
GPAA1-209ENST00000527653 GRIN2AQ12879 1464 aa32.45■■■□□ 2.79
GPAA1-209ENST00000527653 CUL7Q14999 1698 aa32.44■■■□□ 2.78
GPAA1-209ENST00000527653 CLASP1Q7Z460 1538 aa32.35■■■□□ 2.77
GPAA1-209ENST00000527653 IGF1RP08069 1367 aa32.32■■■□□ 2.77
GPAA1-209ENST00000527653 RIMBP3CA6NJZ7 1639 aa32.27■■■□□ 2.76
GPAA1-209ENST00000527653 RIMBP3BA6NNM3 1639 aa32.27■■■□□ 2.76
GPAA1-209ENST00000527653 RIMBP3Q9UFD9 1639 aa32.27■■■□□ 2.76
GPAA1-209ENST00000527653 ARHGEF11O15085 1522 aa32.26■■■□□ 2.76
GPAA1-209ENST00000527653 CEP170Q5SW79 1584 aa32.26■■■□□ 2.75
GPAA1-209ENST00000527653 NUP160Q12769 1436 aa32.25■■■□□ 2.75
GPAA1-209ENST00000527653 CARMIL1Q5VZK9 1371 aa32.22■■■□□ 2.75
GPAA1-209ENST00000527653 RUSC2Q8N2Y8 1516 aa32.2■■■□□ 2.74
GPAA1-209ENST00000527653 CHIC1Q5VXU3 224 aa32.12■■■□□ 2.73
GPAA1-209ENST00000527653 RAPGEF2Q9Y4G8 1499 aa32.09■■■□□ 2.73
GPAA1-209ENST00000527653 EEA1Q15075 1411 aa32.09■■■□□ 2.73
GPAA1-209ENST00000527653 SHROOM2Q13796 1616 aa32.04■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms