Protein–RNA interactions for Protein: P82279

CRB1, Protein crumbs homolog 1, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRB1P82279 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC31.66■■■□□ 2.66
CRB1P82279 AC026271.2-201ENST00000428091 497 ntBASIC31.66■■■□□ 2.66
CRB1P82279 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC31.66■■■□□ 2.66
CRB1P82279 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC31.66■■■□□ 2.66
CRB1P82279 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC31.65■■■□□ 2.66
CRB1P82279 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC31.65■■■□□ 2.66
CRB1P82279 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CRB1P82279 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC31.65■■■□□ 2.66
CRB1P82279 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC31.65■■■□□ 2.66
CRB1P82279 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
CRB1P82279 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC31.64■■■□□ 2.66
CRB1P82279 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC31.64■■■□□ 2.66
CRB1P82279 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
CRB1P82279 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
CRB1P82279 AL031432.3-201ENST00000607698 485 ntBASIC31.63■■■□□ 2.65
CRB1P82279 AC092666.2-201ENST00000613287 246 ntBASIC31.63■■■□□ 2.65
CRB1P82279 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC31.63■■■□□ 2.65
CRB1P82279 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
CRB1P82279 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
CRB1P82279 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
CRB1P82279 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
CRB1P82279 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
CRB1P82279 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CRB1P82279 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
CRB1P82279 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC31.62■■■□□ 2.65
CRB1P82279 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC31.62■■■□□ 2.65
CRB1P82279 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC31.62■■■□□ 2.65
CRB1P82279 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC31.62■■■□□ 2.65
CRB1P82279 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC31.61■■■□□ 2.65
CRB1P82279 PBX2P1-201ENST00000493219 1291 ntBASIC31.61■■■□□ 2.65
CRB1P82279 AC142381.2-201ENST00000566120 298 ntBASIC31.61■■■□□ 2.65
CRB1P82279 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC31.61■■■□□ 2.65
CRB1P82279 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
CRB1P82279 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
CRB1P82279 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
CRB1P82279 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC31.6■■■□□ 2.65
CRB1P82279 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC31.6■■■□□ 2.65
CRB1P82279 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
CRB1P82279 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC31.6■■■□□ 2.65
CRB1P82279 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC31.6■■■□□ 2.65
CRB1P82279 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC31.59■■■□□ 2.65
CRB1P82279 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CRB1P82279 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC31.59■■■□□ 2.65
CRB1P82279 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC31.59■■■□□ 2.65
CRB1P82279 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
CRB1P82279 SUDS3P1-201ENST00000505831 966 ntBASIC31.58■■■□□ 2.65
CRB1P82279 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC31.58■■■□□ 2.65
CRB1P82279 SSSCA1-AS1-201ENST00000567594 614 ntBASIC31.58■■■□□ 2.65
CRB1P82279 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC31.58■■■□□ 2.65
CRB1P82279 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
CRB1P82279 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC31.58■■■□□ 2.65
CRB1P82279 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC31.58■■■□□ 2.65
CRB1P82279 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC31.57■■■□□ 2.64
CRB1P82279 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC31.57■■■□□ 2.64
CRB1P82279 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC31.57■■■□□ 2.64
CRB1P82279 AC135279.3-201ENST00000610945 1311 ntBASIC31.56■■■□□ 2.64
CRB1P82279 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC31.56■■■□□ 2.64
CRB1P82279 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC31.56■■■□□ 2.64
CRB1P82279 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC31.56■■■□□ 2.64
CRB1P82279 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC31.56■■■□□ 2.64
CRB1P82279 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC31.55■■■□□ 2.64
CRB1P82279 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CRB1P82279 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
CRB1P82279 CLTA-206ENST00000466396 695 ntTSL 2 BASIC31.55■■■□□ 2.64
CRB1P82279 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
CRB1P82279 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC31.55■■■□□ 2.64
CRB1P82279 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CRB1P82279 SNAI3-AS1-204ENST00000567997 2048 ntBASIC31.54■■■□□ 2.64
CRB1P82279 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CRB1P82279 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CRB1P82279 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC31.54■■■□□ 2.64
CRB1P82279 SNX5-217ENST00000606557 1087 ntBASIC31.54■■■□□ 2.64
CRB1P82279 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
CRB1P82279 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC31.53■■■□□ 2.64
CRB1P82279 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC31.53■■■□□ 2.64
CRB1P82279 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC31.53■■■□□ 2.64
CRB1P82279 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CRB1P82279 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC31.52■■■□□ 2.64
CRB1P82279 LGR4-203ENST00000480977 492 ntTSL 2 BASIC31.52■■■□□ 2.64
CRB1P82279 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC31.52■■■□□ 2.64
CRB1P82279 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC31.52■■■□□ 2.64
CRB1P82279 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC31.51■■■□□ 2.64
CRB1P82279 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC31.51■■■□□ 2.63
CRB1P82279 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
CRB1P82279 UNC93B3-201ENST00000308076 687 ntBASIC31.5■■■□□ 2.63
CRB1P82279 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC31.5■■■□□ 2.63
CRB1P82279 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC31.5■■■□□ 2.63
CRB1P82279 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CRB1P82279 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC31.49■■■□□ 2.63
CRB1P82279 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC31.49■■■□□ 2.63
CRB1P82279 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC31.49■■■□□ 2.63
CRB1P82279 AL136162.1-201ENST00000607711 1078 ntBASIC31.49■■■□□ 2.63
CRB1P82279 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC31.49■■■□□ 2.63
CRB1P82279 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CRB1P82279 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CRB1P82279 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC31.49■■■□□ 2.63
CRB1P82279 AC104564.3-201ENST00000582367 638 ntBASIC31.49■■■□□ 2.63
CRB1P82279 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CRB1P82279 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
CRB1P82279 PKM-203ENST00000389093 2279 ntTSL 5 BASIC31.48■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms