Protein–RNA interactions for Protein: Q5T1V6

DDX59, Probable ATP-dependent RNA helicase DDX59, humanhuman

Known RBP eCLIP

Length 619 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX59Q5T1V6 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.713e-38■■■■■ 77.2
DDX59Q5T1V6 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC13.05□□□□□ -0.323e-38■■■■■ 77.2
DDX59Q5T1V6 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.171e-7■■■■■ 75.6
DDX59Q5T1V6 BTBD2-206ENST00000589200 858 ntTSL 519.63■□□□□ 0.731e-7■■■■■ 75.6
DDX59Q5T1V6 BTBD2-208ENST00000590646 572 ntTSL 413.41□□□□□ -0.261e-7■■■■■ 75.6
DDX59Q5T1V6 BTBD2-205ENST00000588395 352 ntTSL 512.92□□□□□ -0.341e-7■■■■■ 75.6
DDX59Q5T1V6 BTBD2-203ENST00000587742 559 ntTSL 512.65□□□□□ -0.381e-7■■■■■ 75.6
DDX59Q5T1V6 PIDD1-209ENST00000531286 1937 ntTSL 218.8■□□□□ 0.62e-12■■■■■ 75.6
DDX59Q5T1V6 PIDD1-206ENST00000527812 481 ntTSL 314.72□□□□□ -0.052e-12■■■■■ 75.6
DDX59Q5T1V6 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC22.43■■□□□ 1.184e-8■■■■■ 74.4
DDX59Q5T1V6 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC22.33■■□□□ 1.174e-8■■■■■ 74.4
DDX59Q5T1V6 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.124e-8■■■■■ 74.4
DDX59Q5T1V6 R3HDM4-205ENST00000589445 705 ntTSL 320.64■□□□□ 0.894e-8■■■■■ 74.4
DDX59Q5T1V6 R3HDM4-204ENST00000589428 1704 ntTSL 319.73■□□□□ 0.754e-8■■■■■ 74.4
DDX59Q5T1V6 R3HDM4-206ENST00000590454 1006 ntTSL 319.66■□□□□ 0.744e-8■■■■■ 74.4
DDX59Q5T1V6 RIN3-206ENST00000555589 2814 ntTSL 1 (best)15.7■□□□□ 0.12e-11■■■■■ 73.6
DDX59Q5T1V6 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.192e-11■■■■■ 73.6
DDX59Q5T1V6 RIN3-202ENST00000418924 3592 ntTSL 213.63□□□□□ -0.232e-11■■■■■ 73.6
DDX59Q5T1V6 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.272e-11■■■■■ 73.6
DDX59Q5T1V6 RIN3-204ENST00000553992 577 ntTSL 410.74□□□□□ -0.692e-11■■■■■ 73.6
DDX59Q5T1V6 ARID1B-225ENST00000637532 445 ntTSL 510.48□□□□□ -0.733e-9■■■■■ 72.9
DDX59Q5T1V6 ARID1B-218ENST00000636748 8853 ntTSL 28.74□□□□□ -1.013e-9■■■■■ 72.9
DDX59Q5T1V6 ARID1B-235ENST00000638000 1401 ntTSL 58.08□□□□□ -1.123e-9■■■■■ 72.9
DDX59Q5T1V6 ASMTL-AS1-202ENST00000420411 697 ntTSL 1 (best)10.23□□□□□ -0.772e-7■■■■■ 72
DDX59Q5T1V6 ENTPD2-203ENST00000460614 1427 ntTSL 1 (best)16.11■□□□□ 0.171e-16■■■■■ 69.9
DDX59Q5T1V6 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.77■□□□□ 0.913e-14■■■■■ 68.5
DDX59Q5T1V6 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.561e-11■■■■■ 68.1
DDX59Q5T1V6 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.28■□□□□ 0.521e-11■■■■■ 68.1
DDX59Q5T1V6 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.41e-11■■■■■ 68.1
DDX59Q5T1V6 MAPK8IP3-203ENST00000561765 2374 ntTSL 1 (best)16.08■□□□□ 0.171e-11■■■■■ 68.1
DDX59Q5T1V6 MAPK8IP3-207ENST00000564098 4436 ntTSL 215.01□□□□□ -0.011e-11■■■■■ 68.1
DDX59Q5T1V6 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC6.7□□□□□ -1.348e-11■■■■■ 67.8
DDX59Q5T1V6 PHF3-204ENST00000481385 2787 ntTSL 213.54□□□□□ -0.242e-12■■■■■ 67.6
DDX59Q5T1V6 PHF3-212ENST00000515594 3074 ntTSL 212.5□□□□□ -0.412e-12■■■■■ 67.6
DDX59Q5T1V6 PHF3-205ENST00000494284 2854 ntTSL 211.97□□□□□ -0.492e-12■■■■■ 67.6
DDX59Q5T1V6 PHF3-201ENST00000262043 8233 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.782e-12■■■■■ 67.6
DDX59Q5T1V6 PHF3-208ENST00000506783 3700 ntTSL 1 (best)9.35□□□□□ -0.912e-12■■■■■ 67.6
DDX59Q5T1V6 PHF3-210ENST00000509876 7124 ntTSL 1 (best)4.86□□□□□ -1.632e-12■■■■■ 67.6
DDX59Q5T1V6 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.872e-12■■■■■ 67.6
DDX59Q5T1V6 DEAF1-210ENST00000529717 705 ntTSL 517.61■□□□□ 0.414e-13■■■■■ 66.7
DDX59Q5T1V6 DEAF1-202ENST00000524786 475 ntTSL 413.84□□□□□ -0.194e-13■■■■■ 66.7
DDX59Q5T1V6 DEAF1-203ENST00000525626 585 ntTSL 312.83□□□□□ -0.364e-13■■■■■ 66.7
DDX59Q5T1V6 DEAF1-209ENST00000528864 557 ntTSL 48.9□□□□□ -0.984e-13■■■■■ 66.7
DDX59Q5T1V6 DEAF1-211ENST00000529727 248 ntTSL 36.84□□□□□ -1.314e-13■■■■■ 66.7
DDX59Q5T1V6 CTDNEP1-209ENST00000574205 1506 ntTSL 530.31■■■□□ 2.444e-7■■■■■ 66.4
DDX59Q5T1V6 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.914e-7■■■■■ 66.4
DDX59Q5T1V6 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.77□□□□□ -0.047e-41■■■■■ 66.3
DDX59Q5T1V6 SMC4-221ENST00000489573 1553 ntTSL 1 (best)20.37■□□□□ 0.851e-13■■■■■ 65.9
DDX59Q5T1V6 SMC4-209ENST00000468653 1756 ntTSL 217.96■□□□□ 0.471e-13■■■■■ 65.9
DDX59Q5T1V6 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.451e-13■■■■■ 65.9
DDX59Q5T1V6 SMC4-211ENST00000469858 1971 ntTSL 217.2■□□□□ 0.341e-13■■■■■ 65.9
DDX59Q5T1V6 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.53■□□□□ 0.081e-13■■■■■ 65.9
DDX59Q5T1V6 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.361e-13■■■■■ 65.9
DDX59Q5T1V6 SMC4-210ENST00000469762 3998 ntTSL 2 BASIC9.96□□□□□ -0.821e-13■■■■■ 65.9
DDX59Q5T1V6 SMC4-213ENST00000472282 667 ntTSL 38.32□□□□□ -1.081e-13■■■■■ 65.9
DDX59Q5T1V6 SMC4-214ENST00000472991 582 ntTSL 58.32□□□□□ -1.081e-13■■■■■ 65.9
DDX59Q5T1V6 SMC4-212ENST00000470240 724 ntTSL 37.65□□□□□ -1.181e-13■■■■■ 65.9
DDX59Q5T1V6 SMC4-208ENST00000467468 566 ntTSL 43.91□□□□□ -1.781e-13■■■■■ 65.9
DDX59Q5T1V6 SMC4-219ENST00000487747 637 ntTSL 52.74□□□□□ -1.971e-13■■■■■ 65.9
DDX59Q5T1V6 SMC4-227ENST00000497984 563 ntTSL 52.65□□□□□ -1.991e-13■■■■■ 65.9
DDX59Q5T1V6 MIR15B-201ENST00000385045 98 ntBASIC1□□□□□ -2.251e-13■■■■■ 65.9
DDX59Q5T1V6 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.353e-13■■■■■ 65.8
DDX59Q5T1V6 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.068e-15■■■■■ 65.7
DDX59Q5T1V6 AMBP-204ENST00000603230 1057 ntTSL 1 (best)13.89□□□□□ -0.198e-15■■■■■ 65.7
DDX59Q5T1V6 AMBP-203ENST00000540645 1356 ntTSL 211.71□□□□□ -0.538e-15■■■■■ 65.7
DDX59Q5T1V6 KHDRBS1-203ENST00000484270 1989 ntTSL 518.51■□□□□ 0.552e-6■■■■■ 65.3
DDX59Q5T1V6 KHDRBS1-201ENST00000307714 2738 ntTSL 1 (best)18.13■□□□□ 0.492e-6■■■■■ 65.3
DDX59Q5T1V6 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.45■□□□□ 0.382e-6■■■■■ 65.3
DDX59Q5T1V6 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.162e-6■■■■■ 65.3
DDX59Q5T1V6 LAMA5-213ENST00000497053 723 ntTSL 313.97□□□□□ -0.172e-7■■■■■ 65.1
DDX59Q5T1V6 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.788e-9■■■■■ 65
DDX59Q5T1V6 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.67□□□□□ -0.223e-10■■■■■ 64.9
DDX59Q5T1V6 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.273e-10■■■■■ 64.9
DDX59Q5T1V6 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.76□□□□□ -0.051e-7■■■■■ 64.8
DDX59Q5T1V6 CTSD-206ENST00000497544 783 ntTSL 218.45■□□□□ 0.544e-12■■■■■ 63.9
DDX59Q5T1V6 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.434e-12■■■■■ 63.9
DDX59Q5T1V6 CTSD-204ENST00000433655 2006 ntTSL 516.33■□□□□ 0.214e-12■■■■■ 63.9
DDX59Q5T1V6 CTSD-209ENST00000637158 1200 ntTSL 516.11■□□□□ 0.174e-12■■■■■ 63.9
DDX59Q5T1V6 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.134e-12■■■■■ 63.9
DDX59Q5T1V6 CTSD-203ENST00000429746 690 ntTSL 315.83■□□□□ 0.124e-12■■■■■ 63.9
DDX59Q5T1V6 CTSD-214ENST00000637937 1262 ntTSL 515.25■□□□□ 0.034e-12■■■■■ 63.9
DDX59Q5T1V6 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.014e-12■■■■■ 63.9
DDX59Q5T1V6 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.024e-12■■■■■ 63.9
DDX59Q5T1V6 CTSD-205ENST00000438213 946 ntTSL 214.84□□□□□ -0.034e-12■■■■■ 63.9
DDX59Q5T1V6 AC068580.4-204ENST00000427721 1007 ntTSL 214.52□□□□□ -0.094e-12■■■■■ 63.9
DDX59Q5T1V6 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.114e-12■■■■■ 63.9
DDX59Q5T1V6 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.114e-12■■■■■ 63.9
DDX59Q5T1V6 CTSD-208ENST00000636843 1512 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.584e-12■■■■■ 63.9
DDX59Q5T1V6 AC068580.4-203ENST00000636397 4038 ntAPPRIS P5 TSL 5 BASIC11.27□□□□□ -0.614e-12■■■■■ 63.9
DDX59Q5T1V6 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.141e-13■■■■■ 63.7
DDX59Q5T1V6 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.21□□□□□ -0.131e-13■■■■■ 63.7
DDX59Q5T1V6 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.91e-15■■■■■ 63.7
DDX59Q5T1V6 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.831e-15■■■■■ 63.7
DDX59Q5T1V6 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.711e-15■■■■■ 63.7
DDX59Q5T1V6 CTU2-208ENST00000566637 1619 ntTSL 219.42■□□□□ 0.71e-15■■■■■ 63.7
DDX59Q5T1V6 CTU2-204ENST00000564105 1586 ntTSL 1 (best)17.81■□□□□ 0.441e-15■■■■■ 63.7
DDX59Q5T1V6 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC7.64□□□□□ -1.191e-15■■■■■ 63.7
DDX59Q5T1V6 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.291e-15■■■■■ 63.7
DDX59Q5T1V6 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.351e-15■■■■■ 63.7
DDX59Q5T1V6 ZNF627-203ENST00000587939 591 ntTSL 412.42□□□□□ -0.424e-13■■■■■ 63.4
Retrieved 100 of 7,289 protein–RNA pairs in 372.6 ms