Protein–RNA interactions for Protein: Q5T1V6

DDX59, Probable ATP-dependent RNA helicase DDX59, humanhuman

Known RBP eCLIP

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX59Q5T1V6 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.713e-38■■■■■ 77.2
DDX59Q5T1V6 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC13.05□□□□□ -0.323e-38■■■■■ 77.2
DDX59Q5T1V6 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.171e-7■■■■■ 75.6
DDX59Q5T1V6 BTBD2-206ENST00000589200 858 ntTSL 519.63■□□□□ 0.731e-7■■■■■ 75.6
DDX59Q5T1V6 BTBD2-208ENST00000590646 572 ntTSL 413.41□□□□□ -0.261e-7■■■■■ 75.6
DDX59Q5T1V6 BTBD2-205ENST00000588395 352 ntTSL 512.92□□□□□ -0.341e-7■■■■■ 75.6
DDX59Q5T1V6 BTBD2-203ENST00000587742 559 ntTSL 512.65□□□□□ -0.381e-7■■■■■ 75.6
DDX59Q5T1V6 PIDD1-209ENST00000531286 1937 ntTSL 218.8■□□□□ 0.62e-12■■■■■ 75.6
DDX59Q5T1V6 PIDD1-206ENST00000527812 481 ntTSL 314.72□□□□□ -0.052e-12■■■■■ 75.6
DDX59Q5T1V6 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC22.43■■□□□ 1.184e-8■■■■■ 74.4
DDX59Q5T1V6 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC22.33■■□□□ 1.174e-8■■■■■ 74.4
DDX59Q5T1V6 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.124e-8■■■■■ 74.4
DDX59Q5T1V6 R3HDM4-205ENST00000589445 705 ntTSL 320.64■□□□□ 0.894e-8■■■■■ 74.4
DDX59Q5T1V6 R3HDM4-204ENST00000589428 1704 ntTSL 319.73■□□□□ 0.754e-8■■■■■ 74.4
DDX59Q5T1V6 R3HDM4-206ENST00000590454 1006 ntTSL 319.66■□□□□ 0.744e-8■■■■■ 74.4
DDX59Q5T1V6 RIN3-206ENST00000555589 2814 ntTSL 1 (best)15.7■□□□□ 0.12e-11■■■■■ 73.6
DDX59Q5T1V6 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.192e-11■■■■■ 73.6
DDX59Q5T1V6 RIN3-202ENST00000418924 3592 ntTSL 213.63□□□□□ -0.232e-11■■■■■ 73.6
DDX59Q5T1V6 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.272e-11■■■■■ 73.6
DDX59Q5T1V6 RIN3-204ENST00000553992 577 ntTSL 410.74□□□□□ -0.692e-11■■■■■ 73.6
DDX59Q5T1V6 ARID1B-225ENST00000637532 445 ntTSL 510.48□□□□□ -0.733e-9■■■■■ 72.9
DDX59Q5T1V6 ARID1B-218ENST00000636748 8853 ntTSL 28.74□□□□□ -1.013e-9■■■■■ 72.9
DDX59Q5T1V6 ARID1B-235ENST00000638000 1401 ntTSL 58.08□□□□□ -1.123e-9■■■■■ 72.9
DDX59Q5T1V6 ASMTL-AS1-202ENST00000420411 697 ntTSL 1 (best)10.23□□□□□ -0.772e-7■■■■■ 72
DDX59Q5T1V6 ENTPD2-203ENST00000460614 1427 ntTSL 1 (best)16.11■□□□□ 0.171e-16■■■■■ 69.9
DDX59Q5T1V6 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.77■□□□□ 0.913e-14■■■■■ 68.5
DDX59Q5T1V6 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.561e-11■■■■■ 68.1
DDX59Q5T1V6 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.28■□□□□ 0.521e-11■■■■■ 68.1
DDX59Q5T1V6 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.41e-11■■■■■ 68.1
DDX59Q5T1V6 MAPK8IP3-203ENST00000561765 2374 ntTSL 1 (best)16.08■□□□□ 0.171e-11■■■■■ 68.1
DDX59Q5T1V6 MAPK8IP3-207ENST00000564098 4436 ntTSL 215.01□□□□□ -0.011e-11■■■■■ 68.1
DDX59Q5T1V6 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC6.7□□□□□ -1.348e-11■■■■■ 67.8
DDX59Q5T1V6 PHF3-204ENST00000481385 2787 ntTSL 213.54□□□□□ -0.242e-12■■■■■ 67.6
DDX59Q5T1V6 PHF3-212ENST00000515594 3074 ntTSL 212.5□□□□□ -0.412e-12■■■■■ 67.6
DDX59Q5T1V6 PHF3-205ENST00000494284 2854 ntTSL 211.97□□□□□ -0.492e-12■■■■■ 67.6
DDX59Q5T1V6 PHF3-201ENST00000262043 8233 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.782e-12■■■■■ 67.6
DDX59Q5T1V6 PHF3-208ENST00000506783 3700 ntTSL 1 (best)9.35□□□□□ -0.912e-12■■■■■ 67.6
DDX59Q5T1V6 PHF3-210ENST00000509876 7124 ntTSL 1 (best)4.86□□□□□ -1.632e-12■■■■■ 67.6
DDX59Q5T1V6 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.872e-12■■■■■ 67.6
DDX59Q5T1V6 DEAF1-210ENST00000529717 705 ntTSL 517.61■□□□□ 0.414e-13■■■■■ 66.7
DDX59Q5T1V6 DEAF1-202ENST00000524786 475 ntTSL 413.84□□□□□ -0.194e-13■■■■■ 66.7
DDX59Q5T1V6 DEAF1-203ENST00000525626 585 ntTSL 312.83□□□□□ -0.364e-13■■■■■ 66.7
DDX59Q5T1V6 DEAF1-209ENST00000528864 557 ntTSL 48.9□□□□□ -0.984e-13■■■■■ 66.7
DDX59Q5T1V6 DEAF1-211ENST00000529727 248 ntTSL 36.84□□□□□ -1.314e-13■■■■■ 66.7
DDX59Q5T1V6 CTDNEP1-209ENST00000574205 1506 ntTSL 530.31■■■□□ 2.444e-7■■■■■ 66.4
DDX59Q5T1V6 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.914e-7■■■■■ 66.4
DDX59Q5T1V6 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.77□□□□□ -0.047e-41■■■■■ 66.3
DDX59Q5T1V6 SMC4-221ENST00000489573 1553 ntTSL 1 (best)20.37■□□□□ 0.851e-13■■■■■ 65.9
DDX59Q5T1V6 SMC4-209ENST00000468653 1756 ntTSL 217.96■□□□□ 0.471e-13■■■■■ 65.9
DDX59Q5T1V6 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.451e-13■■■■■ 65.9
DDX59Q5T1V6 SMC4-211ENST00000469858 1971 ntTSL 217.2■□□□□ 0.341e-13■■■■■ 65.9
DDX59Q5T1V6 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.53■□□□□ 0.081e-13■■■■■ 65.9
DDX59Q5T1V6 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.361e-13■■■■■ 65.9
DDX59Q5T1V6 SMC4-210ENST00000469762 3998 ntTSL 2 BASIC9.96□□□□□ -0.821e-13■■■■■ 65.9
DDX59Q5T1V6 SMC4-213ENST00000472282 667 ntTSL 38.32□□□□□ -1.081e-13■■■■■ 65.9
DDX59Q5T1V6 SMC4-214ENST00000472991 582 ntTSL 58.32□□□□□ -1.081e-13■■■■■ 65.9
DDX59Q5T1V6 SMC4-212ENST00000470240 724 ntTSL 37.65□□□□□ -1.181e-13■■■■■ 65.9
DDX59Q5T1V6 SMC4-208ENST00000467468 566 ntTSL 43.91□□□□□ -1.781e-13■■■■■ 65.9
DDX59Q5T1V6 SMC4-219ENST00000487747 637 ntTSL 52.74□□□□□ -1.971e-13■■■■■ 65.9
DDX59Q5T1V6 SMC4-227ENST00000497984 563 ntTSL 52.65□□□□□ -1.991e-13■■■■■ 65.9
DDX59Q5T1V6 MIR15B-201ENST00000385045 98 ntBASIC1□□□□□ -2.251e-13■■■■■ 65.9
DDX59Q5T1V6 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.353e-13■■■■■ 65.8
DDX59Q5T1V6 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.068e-15■■■■■ 65.7
DDX59Q5T1V6 AMBP-204ENST00000603230 1057 ntTSL 1 (best)13.89□□□□□ -0.198e-15■■■■■ 65.7
DDX59Q5T1V6 AMBP-203ENST00000540645 1356 ntTSL 211.71□□□□□ -0.538e-15■■■■■ 65.7
DDX59Q5T1V6 KHDRBS1-203ENST00000484270 1989 ntTSL 518.51■□□□□ 0.552e-6■■■■■ 65.3
DDX59Q5T1V6 KHDRBS1-201ENST00000307714 2738 ntTSL 1 (best)18.13■□□□□ 0.492e-6■■■■■ 65.3
DDX59Q5T1V6 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.45■□□□□ 0.382e-6■■■■■ 65.3
DDX59Q5T1V6 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.162e-6■■■■■ 65.3
DDX59Q5T1V6 LAMA5-213ENST00000497053 723 ntTSL 313.97□□□□□ -0.172e-7■■■■■ 65.1
DDX59Q5T1V6 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.788e-9■■■■■ 65
DDX59Q5T1V6 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.67□□□□□ -0.223e-10■■■■■ 64.9
DDX59Q5T1V6 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.273e-10■■■■■ 64.9
DDX59Q5T1V6 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.76□□□□□ -0.051e-7■■■■■ 64.8
DDX59Q5T1V6 CTSD-206ENST00000497544 783 ntTSL 218.45■□□□□ 0.544e-12■■■■■ 63.9
DDX59Q5T1V6 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.434e-12■■■■■ 63.9
DDX59Q5T1V6 CTSD-204ENST00000433655 2006 ntTSL 516.33■□□□□ 0.214e-12■■■■■ 63.9
DDX59Q5T1V6 CTSD-209ENST00000637158 1200 ntTSL 516.11■□□□□ 0.174e-12■■■■■ 63.9
DDX59Q5T1V6 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.134e-12■■■■■ 63.9
DDX59Q5T1V6 CTSD-203ENST00000429746 690 ntTSL 315.83■□□□□ 0.124e-12■■■■■ 63.9
DDX59Q5T1V6 CTSD-214ENST00000637937 1262 ntTSL 515.25■□□□□ 0.034e-12■■■■■ 63.9
DDX59Q5T1V6 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.014e-12■■■■■ 63.9
DDX59Q5T1V6 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.024e-12■■■■■ 63.9
DDX59Q5T1V6 CTSD-205ENST00000438213 946 ntTSL 214.84□□□□□ -0.034e-12■■■■■ 63.9
DDX59Q5T1V6 AC068580.4-204ENST00000427721 1007 ntTSL 214.52□□□□□ -0.094e-12■■■■■ 63.9
DDX59Q5T1V6 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.114e-12■■■■■ 63.9
DDX59Q5T1V6 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.114e-12■■■■■ 63.9
DDX59Q5T1V6 CTSD-208ENST00000636843 1512 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.584e-12■■■■■ 63.9
DDX59Q5T1V6 AC068580.4-203ENST00000636397 4038 ntAPPRIS P5 TSL 5 BASIC11.27□□□□□ -0.614e-12■■■■■ 63.9
DDX59Q5T1V6 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.141e-13■■■■■ 63.7
DDX59Q5T1V6 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.21□□□□□ -0.131e-13■■■■■ 63.7
DDX59Q5T1V6 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.91e-15■■■■■ 63.7
DDX59Q5T1V6 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.831e-15■■■■■ 63.7
DDX59Q5T1V6 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.711e-15■■■■■ 63.7
DDX59Q5T1V6 CTU2-208ENST00000566637 1619 ntTSL 219.42■□□□□ 0.71e-15■■■■■ 63.7
DDX59Q5T1V6 CTU2-204ENST00000564105 1586 ntTSL 1 (best)17.81■□□□□ 0.441e-15■■■■■ 63.7
DDX59Q5T1V6 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC7.64□□□□□ -1.191e-15■■■■■ 63.7
DDX59Q5T1V6 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.291e-15■■■■■ 63.7
DDX59Q5T1V6 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.351e-15■■■■■ 63.7
DDX59Q5T1V6 ZNF627-203ENST00000587939 591 ntTSL 412.42□□□□□ -0.424e-13■■■■■ 63.4
Retrieved 100 of 7,289 protein–RNA pairs in 27.5 ms