RNA–Protein interactions for RNA: ENST00000638000.1

ARID1B-235, Transcript of AT-rich interaction domain 1B, humanhuman

TSL 5

Gene ARID1B, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1B-235ENST00000638000 AEBP2Q6ZN18 517 aaPredicted RBP21.48■■□□□ 1.03
ARID1B-235ENST00000638000 CHIC1Q5VXU3 224 aa20.26■□□□□ 0.83
ARID1B-235ENST00000638000 NISCHQ9Y2I1 1504 aa18.78■□□□□ 0.6
ARID1B-235ENST00000638000 SENP3Q9H4L4 574 aaPredicted RBP18.63■□□□□ 0.57
ARID1B-235ENST00000638000 PHF23Q9BUL5 403 aaPredicted RBP18.21■□□□□ 0.51
ARID1B-235ENST00000638000 POTEDQ86YR6 584 aa17.59■□□□□ 0.41
ARID1B-235ENST00000638000 FOXD1Q16676 465 aa17.37■□□□□ 0.37
ARID1B-235ENST00000638000 MSH5O43196 834 aa16.7■□□□□ 0.26
ARID1B-235ENST00000638000 CCDC180Q9P1Z9 1646 aa16.34■□□□□ 0.21
ARID1B-235ENST00000638000 PIAS4Q8N2W9 510 aaPredicted RBP16.08■□□□□ 0.16
ARID1B-235ENST00000638000 ZCCHC6Q5VYS8 1495 aaKnown RBP15.86■□□□□ 0.13
ARID1B-235ENST00000638000 DCAF1Q9Y4B6 1507 aa15.74■□□□□ 0.11
ARID1B-235ENST00000638000 PPP6R1Q9UPN7 881 aa15.53■□□□□ 0.08
ARID1B-235ENST00000638000 MYO15BQ96JP2 1530 aa15.5■□□□□ 0.07
ARID1B-235ENST00000638000 ADRA2BP18089 450 aa15.47■□□□□ 0.07
ARID1B-235ENST00000638000 PLPPR3Q6T4P5 718 aa15.43■□□□□ 0.06
ARID1B-235ENST00000638000 NACADO15069 1562 aa15.13■□□□□ 0.01
ARID1B-235ENST00000638000 SHROOM4Q9ULL8 1493 aa15.1■□□□□ 0.01
ARID1B-235ENST00000638000 DCAF8L2P0C7V8 631 aa14.97□□□□□ -0.01
ARID1B-235ENST00000638000 ABCC9O60706 1549 aa14.88□□□□□ -0.03
ARID1B-235ENST00000638000 RB1CC1Q8TDY2 1594 aa14.86□□□□□ -0.03
ARID1B-235ENST00000638000 CACNB1Q02641 598 aaPredicted RBP14.82□□□□□ -0.04
ARID1B-235ENST00000638000 SCRIBQ14160 1630 aa14.76□□□□□ -0.05
ARID1B-235ENST00000638000 SUPT5HO00267 1087 aaKnown RBP14.72□□□□□ -0.05
ARID1B-235ENST00000638000 RSF1Q96T23 1441 aaPredicted RBP14.63□□□□□ -0.07
ARID1B-235ENST00000638000 DMRT2Q9Y5R5 561 aa14.59□□□□□ -0.07
ARID1B-235ENST00000638000 BAZ1AQ9NRL2 1556 aaPredicted RBP14.5□□□□□ -0.09
ARID1B-235ENST00000638000 UNC13AQ9UPW8 1703 aa14.47□□□□□ -0.09
ARID1B-235ENST00000638000 MAPK8IP2Q13387 824 aaPredicted RBP14.44□□□□□ -0.1
ARID1B-235ENST00000638000 MROH2BQ7Z745 1585 aa14.41□□□□□ -0.1
ARID1B-235ENST00000638000 CECR2Q9BXF3 1484 aa14.41□□□□□ -0.1
ARID1B-235ENST00000638000 BICRAQ9NZM4 1560 aa14.37□□□□□ -0.11
ARID1B-235ENST00000638000 SCAF1Q9H7N4 1312 aaKnown RBP14.37□□□□□ -0.11
ARID1B-235ENST00000638000 SMARCA4P51532 1647 aa14.34□□□□□ -0.11
ARID1B-235ENST00000638000 PEG3Q9GZU2 1588 aa14.32□□□□□ -0.12
ARID1B-235ENST00000638000 TOP2AP11388 1531 aaKnown RBP14.27□□□□□ -0.13
ARID1B-235ENST00000638000 WIZO95785 1651 aa14.26□□□□□ -0.13
ARID1B-235ENST00000638000 EIF4G1Q04637 1599 aaKnown RBP14.17□□□□□ -0.14
ARID1B-235ENST00000638000 SMARCA2P51531 1590 aa14.1□□□□□ -0.15
ARID1B-235ENST00000638000 RNF39Q9H2S5 420 aa14.09□□□□□ -0.15
ARID1B-235ENST00000638000 DCAF8L1A6NGE4 600 aa14.07□□□□□ -0.16
ARID1B-235ENST00000638000 CCDC88BA6NC98 1476 aa14.05□□□□□ -0.16
ARID1B-235ENST00000638000 ATAD2BQ9ULI0 1458 aa14.03□□□□□ -0.16
ARID1B-235ENST00000638000 HMGXB3Q12766 1538 aa13.97□□□□□ -0.17
ARID1B-235ENST00000638000 PABPN1Q86U42 306 aaKnown RBP eCLIP13.97□□□□□ -0.17
ARID1B-235ENST00000638000 TRIM41Q8WV44 630 aa13.97□□□□□ -0.17
ARID1B-235ENST00000638000 NCAPD3P42695 1498 aa13.96□□□□□ -0.17
ARID1B-235ENST00000638000 BAZ1BQ9UIG0 1483 aaKnown RBP13.92□□□□□ -0.18
ARID1B-235ENST00000638000 C1QBPQ07021 282 aaKnown RBP13.91□□□□□ -0.18
ARID1B-235ENST00000638000 EEA1Q15075 1411 aa13.87□□□□□ -0.19
ARID1B-235ENST00000638000 WRNQ14191 1432 aaPredicted RBP eCLIP13.75□□□□□ -0.21
ARID1B-235ENST00000638000 HOXD11P31277 338 aaPredicted RBP13.73□□□□□ -0.21
ARID1B-235ENST00000638000 ABCC8Q09428 1581 aa13.72□□□□□ -0.21
ARID1B-235ENST00000638000 LOC105371045A0A1W2PR82 267 aa13.72□□□□□ -0.21
ARID1B-235ENST00000638000 CFTRP13569 1480 aa13.7□□□□□ -0.22
ARID1B-235ENST00000638000 TOP2BQ02880 1626 aa13.67□□□□□ -0.22
ARID1B-235ENST00000638000 POTEHQ6S545 545 aa13.66□□□□□ -0.22
ARID1B-235ENST00000638000 BIVM-ERCC5R4GMW8 1640 aa13.66□□□□□ -0.22
ARID1B-235ENST00000638000 PRDM2Q13029 1718 aa13.64□□□□□ -0.23
ARID1B-235ENST00000638000 SYNJ1O43426 1573 aa13.63□□□□□ -0.23
ARID1B-235ENST00000638000 KIF21BO75037 1637 aa13.6□□□□□ -0.23
ARID1B-235ENST00000638000 TNIKQ9UKE5 1360 aa13.6□□□□□ -0.23
ARID1B-235ENST00000638000 CSRNP3Q8WYN3 585 aa13.56□□□□□ -0.24
ARID1B-235ENST00000638000 SOGA1O94964 1423 aa13.56□□□□□ -0.24
ARID1B-235ENST00000638000 CEP164Q9UPV0 1460 aa13.56□□□□□ -0.24
ARID1B-235ENST00000638000 CC2D2AQ9P2K1 1620 aa13.56□□□□□ -0.24
ARID1B-235ENST00000638000 GOLGA3Q08378 1498 aa13.55□□□□□ -0.24
ARID1B-235ENST00000638000 TRIM26Q12899 539 aaPredicted RBP13.55□□□□□ -0.24
ARID1B-235ENST00000638000 CADPSQ9ULU8 1353 aa13.54□□□□□ -0.24
ARID1B-235ENST00000638000 DNAJC5BQ9UF47 199 aa13.52□□□□□ -0.25
ARID1B-235ENST00000638000 ERICH3Q5RHP9 1530 aa13.5□□□□□ -0.25
ARID1B-235ENST00000638000 FAM9AQ8IZU1 332 aaPredicted RBP13.48□□□□□ -0.25
ARID1B-235ENST00000638000 CUX1P39880 1505 aa13.47□□□□□ -0.25
ARID1B-235ENST00000638000 RUSC2Q8N2Y8 1516 aa13.45□□□□□ -0.26
ARID1B-235ENST00000638000 CEP162Q5TB80 1403 aa13.45□□□□□ -0.26
ARID1B-235ENST00000638000 RNF216Q9NWF9 866 aaPredicted RBP13.45□□□□□ -0.26
ARID1B-235ENST00000638000 PRXQ9BXM0 1461 aa13.44□□□□□ -0.26
ARID1B-235ENST00000638000 HRCP23327 699 aa13.44□□□□□ -0.26
ARID1B-235ENST00000638000 PCGF6Q9BYE7 350 aa13.41□□□□□ -0.26
ARID1B-235ENST00000638000 KIF27Q86VH2 1401 aa13.41□□□□□ -0.26
ARID1B-235ENST00000638000 LAMC3Q9Y6N6 1575 aa13.41□□□□□ -0.26
ARID1B-235ENST00000638000 PPP4R3CPQ6ZMV5 832 aa13.36□□□□□ -0.27
ARID1B-235ENST00000638000 CNKSR2Q8WXI2 1034 aa13.36□□□□□ -0.27
ARID1B-235ENST00000638000 FANCD2Q9BXW9 1451 aa13.33□□□□□ -0.27
ARID1B-235ENST00000638000 DNMBPQ6XZF7 1577 aa13.33□□□□□ -0.28
ARID1B-235ENST00000638000 RAPGEF2Q9Y4G8 1499 aa13.32□□□□□ -0.28
ARID1B-235ENST00000638000 CLIP1P30622 1438 aa13.28□□□□□ -0.28
ARID1B-235ENST00000638000 VPS8Q8N3P4 1428 aa13.28□□□□□ -0.28
ARID1B-235ENST00000638000 ABCA10Q8WWZ4 1543 aa13.27□□□□□ -0.29
ARID1B-235ENST00000638000 UBTFP17480 764 aaKnown RBP13.27□□□□□ -0.29
ARID1B-235ENST00000638000 ZEB1P37275 1124 aaPredicted RBP13.27□□□□□ -0.29
ARID1B-235ENST00000638000 FGD5Q6ZNL6 1462 aa13.26□□□□□ -0.29
ARID1B-235ENST00000638000 PDS5BQ9NTI5 1447 aa13.25□□□□□ -0.29
ARID1B-235ENST00000638000 IGF1RP08069 1367 aa13.23□□□□□ -0.29
ARID1B-235ENST00000638000 TOPBP1Q92547 1522 aa13.23□□□□□ -0.29
ARID1B-235ENST00000638000 CUX2O14529 1486 aa13.2□□□□□ -0.3
ARID1B-235ENST00000638000 POLA1P09884 1462 aaPredicted RBP13.19□□□□□ -0.3
ARID1B-235ENST00000638000 CUL7Q14999 1698 aa13.19□□□□□ -0.3
ARID1B-235ENST00000638000 WDR97A6NE52 1622 aa13.18□□□□□ -0.3
ARID1B-235ENST00000638000 MAP3K1Q13233 1512 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms