RNA–Protein interactions for RNA: ENST00000433655.5

CTSD-204, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 2,006 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-204ENST00000433655 NISCHQ9Y2I1 1504 aa36.68■■■■□ 3.46
CTSD-204ENST00000433655 CCDC180Q9P1Z9 1646 aa31.53■■■□□ 2.64
CTSD-204ENST00000433655 ZCCHC6Q5VYS8 1495 aaKnown RBP30.99■■■□□ 2.55
CTSD-204ENST00000433655 SHROOM4Q9ULL8 1493 aa30.66■■■□□ 2.5
CTSD-204ENST00000433655 DCAF1Q9Y4B6 1507 aa30.23■■■□□ 2.43
CTSD-204ENST00000433655 DCAF8L2P0C7V8 631 aa30.05■■■□□ 2.4
CTSD-204ENST00000433655 SUPT5HO00267 1087 aaKnown RBP29.83■■■□□ 2.37
CTSD-204ENST00000433655 MYO15BQ96JP2 1530 aa29.52■■■□□ 2.32
CTSD-204ENST00000433655 SCRIBQ14160 1630 aa29.27■■■□□ 2.28
CTSD-204ENST00000433655 ABCC9O60706 1549 aa29.21■■■□□ 2.27
CTSD-204ENST00000433655 NACADO15069 1562 aa29.14■■■□□ 2.26
CTSD-204ENST00000433655 CHIC1Q5VXU3 224 aa28.98■■■□□ 2.23
CTSD-204ENST00000433655 RSF1Q96T23 1441 aaPredicted RBP28.8■■■□□ 2.2
CTSD-204ENST00000433655 RB1CC1Q8TDY2 1594 aa28.71■■■□□ 2.19
CTSD-204ENST00000433655 CECR2Q9BXF3 1484 aa28.55■■■□□ 2.16
CTSD-204ENST00000433655 MROH2BQ7Z745 1585 aa28.45■■■□□ 2.15
CTSD-204ENST00000433655 UNC13AQ9UPW8 1703 aa28.39■■■□□ 2.14
CTSD-204ENST00000433655 WIZO95785 1651 aa28.3■■■□□ 2.12
CTSD-204ENST00000433655 BAZ1AQ9NRL2 1556 aaPredicted RBP28.2■■■□□ 2.11
CTSD-204ENST00000433655 SMARCA4P51532 1647 aa28.05■■■□□ 2.08
CTSD-204ENST00000433655 BICRAQ9NZM4 1560 aa27.99■■■□□ 2.07
CTSD-204ENST00000433655 LOC105371045A0A1W2PR82 267 aa27.99■■■□□ 2.07
CTSD-204ENST00000433655 EIF4G1Q04637 1599 aaKnown RBP27.91■■■□□ 2.06
CTSD-204ENST00000433655 TOP2AP11388 1531 aaKnown RBP27.91■■■□□ 2.06
CTSD-204ENST00000433655 TRIM41Q8WV44 630 aa27.89■■■□□ 2.06
CTSD-204ENST00000433655 PABPN1Q86U42 306 aaKnown RBP eCLIP27.74■■■□□ 2.031e-12■□□□□ 10
CTSD-204ENST00000433655 SMARCA2P51531 1590 aa27.73■■■□□ 2.03
CTSD-204ENST00000433655 CCDC88BA6NC98 1476 aa27.69■■■□□ 2.02
CTSD-204ENST00000433655 PEG3Q9GZU2 1588 aa27.62■■■□□ 2.01
CTSD-204ENST00000433655 FAM9AQ8IZU1 332 aaPredicted RBP27.53■■■□□ 2
CTSD-204ENST00000433655 PCGF6Q9BYE7 350 aa27.53■■■□□ 2
CTSD-204ENST00000433655 ABCC8Q09428 1581 aa27.46■■□□□ 1.99
CTSD-204ENST00000433655 HRCP23327 699 aa27.39■■□□□ 1.98
CTSD-204ENST00000433655 ATAD2BQ9ULI0 1458 aa27.35■■□□□ 1.97
CTSD-204ENST00000433655 BAZ1BQ9UIG0 1483 aaKnown RBP27.22■■□□□ 1.95
CTSD-204ENST00000433655 TRIM26Q12899 539 aaPredicted RBP27.21■■□□□ 1.95
CTSD-204ENST00000433655 EHMT2Q96KQ7 1210 aa27.21■■□□□ 1.95
CTSD-204ENST00000433655 SOGA1O94964 1423 aa27.08■■□□□ 1.93
CTSD-204ENST00000433655 WRNQ14191 1432 aaPredicted RBP eCLIP27.04■■□□□ 1.92
CTSD-204ENST00000433655 SYNJ1O43426 1573 aa27.01■■□□□ 1.92
CTSD-204ENST00000433655 RUSC2Q8N2Y8 1516 aa26.99■■□□□ 1.91
CTSD-204ENST00000433655 EEA1Q15075 1411 aa26.98■■□□□ 1.91
CTSD-204ENST00000433655 HMGXB3Q12766 1538 aa26.96■■□□□ 1.91
CTSD-204ENST00000433655 NCAPD3P42695 1498 aa26.92■■□□□ 1.9
CTSD-204ENST00000433655 CSRNP3Q8WYN3 585 aa26.83■■□□□ 1.89
CTSD-204ENST00000433655 TNIKQ9UKE5 1360 aa26.81■■□□□ 1.88
CTSD-204ENST00000433655 CEP162Q5TB80 1403 aa26.79■■□□□ 1.88
CTSD-204ENST00000433655 PPARGC1BQ86YN6 1023 aaKnown RBP26.78■■□□□ 1.88
CTSD-204ENST00000433655 TOP2BQ02880 1626 aa26.75■■□□□ 1.87
CTSD-204ENST00000433655 GOLGA3Q08378 1498 aa26.74■■□□□ 1.87
CTSD-204ENST00000433655 BIVM-ERCC5R4GMW8 1640 aa26.72■■□□□ 1.87
CTSD-204ENST00000433655 KIF21BO75037 1637 aa26.71■■□□□ 1.87
CTSD-204ENST00000433655 CEP164Q9UPV0 1460 aa26.64■■□□□ 1.85
CTSD-204ENST00000433655 CFTRP13569 1480 aa26.59■■□□□ 1.85
CTSD-204ENST00000433655 UBTFP17480 764 aaKnown RBP26.58■■□□□ 1.85
CTSD-204ENST00000433655 PRDM2Q13029 1718 aa26.54■■□□□ 1.84
CTSD-204ENST00000433655 CUX1P39880 1505 aa26.54■■□□□ 1.84
CTSD-204ENST00000433655 RAPGEF2Q9Y4G8 1499 aa26.47■■□□□ 1.83
CTSD-204ENST00000433655 CC2D2AQ9P2K1 1620 aa26.44■■□□□ 1.82
CTSD-204ENST00000433655 ZEB1P37275 1124 aaPredicted RBP26.44■■□□□ 1.82
CTSD-204ENST00000433655 CLIP1P30622 1438 aa26.36■■□□□ 1.81
CTSD-204ENST00000433655 ERICH3Q5RHP9 1530 aa26.34■■□□□ 1.81
CTSD-204ENST00000433655 PRXQ9BXM0 1461 aa26.34■■□□□ 1.81
CTSD-204ENST00000433655 CADPSQ9ULU8 1353 aa26.3■■□□□ 1.8
CTSD-204ENST00000433655 TTBK1Q5TCY1 1321 aaPredicted RBP26.26■■□□□ 1.79
CTSD-204ENST00000433655 VPS8Q8N3P4 1428 aa26.25■■□□□ 1.79
CTSD-204ENST00000433655 KIF27Q86VH2 1401 aa26.23■■□□□ 1.79
CTSD-204ENST00000433655 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.12■■□□□ 1.77
CTSD-204ENST00000433655 FGD5Q6ZNL6 1462 aa26.08■■□□□ 1.77
CTSD-204ENST00000433655 ARAP1Q96P48 1450 aa26.08■■□□□ 1.77
CTSD-204ENST00000433655 CUX2O14529 1486 aa26.05■■□□□ 1.76
CTSD-204ENST00000433655 FANCD2Q9BXW9 1451 aa26.05■■□□□ 1.76
CTSD-204ENST00000433655 RANGAP1P46060 587 aaPredicted RBP26.02■■□□□ 1.76
CTSD-204ENST00000433655 CCER1Q8TC90 406 aaPredicted RBP26.02■■□□□ 1.76
CTSD-204ENST00000433655 IGF1RP08069 1367 aa25.98■■□□□ 1.75
CTSD-204ENST00000433655 NESP48681 1621 aa25.97■■□□□ 1.75
CTSD-204ENST00000433655 DNMBPQ6XZF7 1577 aa25.96■■□□□ 1.75
CTSD-204ENST00000433655 ARHGAP35Q9NRY4 1499 aa25.9■■□□□ 1.74
CTSD-204ENST00000433655 TOPBP1Q92547 1522 aa25.89■■□□□ 1.73
CTSD-204ENST00000433655 APLP2Q06481 763 aa25.87■■□□□ 1.73
CTSD-204ENST00000433655 LAMC3Q9Y6N6 1575 aa25.87■■□□□ 1.73
CTSD-204ENST00000433655 POLA1P09884 1462 aaPredicted RBP25.84■■□□□ 1.73
CTSD-204ENST00000433655 CARMIL1Q5VZK9 1371 aa25.83■■□□□ 1.73
CTSD-204ENST00000433655 ABCA10Q8WWZ4 1543 aa25.82■■□□□ 1.72
CTSD-204ENST00000433655 RAD54L2Q9Y4B4 1467 aa25.81■■□□□ 1.72
CTSD-204ENST00000433655 WDR97A6NE52 1622 aa25.75■■□□□ 1.71
CTSD-204ENST00000433655 URB2Q14146 1524 aaKnown RBP25.75■■□□□ 1.71
CTSD-204ENST00000433655 HNRNPUL2Q1KMD3 747 aaKnown RBP25.74■■□□□ 1.71
CTSD-204ENST00000433655 KANK4Q5T7N3 995 aaPredicted RBP25.73■■□□□ 1.71
CTSD-204ENST00000433655 DNAJC5BQ9UF47 199 aa25.68■■□□□ 1.7
CTSD-204ENST00000433655 CUL7Q14999 1698 aa25.67■■□□□ 1.7
CTSD-204ENST00000433655 KIF21AQ7Z4S6 1674 aa25.64■■□□□ 1.7
CTSD-204ENST00000433655 RRBP1Q9P2E9 1410 aaKnown RBP25.62■■□□□ 1.69
CTSD-204ENST00000433655 ABCA5Q8WWZ7 1642 aa25.6■■□□□ 1.69
CTSD-204ENST00000433655 PDS5BQ9NTI5 1447 aa25.59■■□□□ 1.69
CTSD-204ENST00000433655 MAP3K1Q13233 1512 aa25.59■■□□□ 1.69
CTSD-204ENST00000433655 TIAM1Q13009 1591 aa25.59■■□□□ 1.69
CTSD-204ENST00000433655 CTTNBP2Q8WZ74 1663 aa25.58■■□□□ 1.69
CTSD-204ENST00000433655 PCF11O94913 1555 aaKnown RBP25.52■■□□□ 1.68
CTSD-204ENST00000433655 CFAP43Q8NDM7 1665 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms