Protein–RNA interactions for Protein: Q6UXN2

TREML4, Trem-like transcript 4 protein, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML4Q6UXN2 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 MYL10-201ENST00000223167 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 REC114-201ENST00000331090 927 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 AL355306.1-201ENST00000415580 579 ntBASIC13.24□□□□□ -0.29
TREML4Q6UXN2 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 AL353718.1-201ENST00000451028 517 ntBASIC13.24□□□□□ -0.29
TREML4Q6UXN2 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 AC087752.4-201ENST00000605911 462 ntBASIC13.24□□□□□ -0.29
TREML4Q6UXN2 AC068631.1-255ENST00000608173 588 ntTSL 5 BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 MKKS-203ENST00000609375 882 ntTSL 2 BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 AP001059.3-201ENST00000619053 235 ntBASIC13.24□□□□□ -0.29
TREML4Q6UXN2 AC009118.3-201ENST00000622896 873 ntBASIC13.24□□□□□ -0.29
TREML4Q6UXN2 AC006927.4-201ENST00000639187 543 ntBASIC13.24□□□□□ -0.29
TREML4Q6UXN2 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 DBET-201ENST00000630918 3363 ntBASIC13.24□□□□□ -0.29
TREML4Q6UXN2 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TREML4Q6UXN2 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TREML4Q6UXN2 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC13.23□□□□□ -0.29
TREML4Q6UXN2 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TREML4Q6UXN2 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TREML4Q6UXN2 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
TREML4Q6UXN2 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
TREML4Q6UXN2 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
TREML4Q6UXN2 FO538757.1-201ENST00000623083 1397 ntBASIC13.23□□□□□ -0.29
TREML4Q6UXN2 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
TREML4Q6UXN2 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TREML4Q6UXN2 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
TREML4Q6UXN2 AC144831.1-201ENST00000573312 2656 ntBASIC13.23□□□□□ -0.29
TREML4Q6UXN2 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC13.23□□□□□ -0.29
TREML4Q6UXN2 MFSD8-213ENST00000641134 1327 ntBASIC13.23□□□□□ -0.29
TREML4Q6UXN2 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TREML4Q6UXN2 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TREML4Q6UXN2 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TREML4Q6UXN2 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TREML4Q6UXN2 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.23□□□□□ -0.29
TREML4Q6UXN2 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.23□□□□□ -0.29
TREML4Q6UXN2 LINC00982-205ENST00000420957 435 ntBASIC13.23□□□□□ -0.29
TREML4Q6UXN2 MTND2P9-201ENST00000422293 931 ntBASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms