RNA–Protein interactions for RNA: ENST00000619053.1

AP001059.3-201, humanhuman

BASIC

Gene AP001059.3, Length 235 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001059.3-201ENST00000619053 NISCHQ9Y2I1 1504 aa40.45■■■■■ 4.07
AP001059.3-201ENST00000619053 CCDC180Q9P1Z9 1646 aa36.21■■■■□ 3.39
AP001059.3-201ENST00000619053 ABCC9O60706 1549 aa35.56■■■■□ 3.28
AP001059.3-201ENST00000619053 RB1CC1Q8TDY2 1594 aa34.17■■■■□ 3.06
AP001059.3-201ENST00000619053 NACADO15069 1562 aa34.06■■■■□ 3.04
AP001059.3-201ENST00000619053 MYO15BQ96JP2 1530 aa33.79■■■■□ 3
AP001059.3-201ENST00000619053 DCAF8L2P0C7V8 631 aa33.76■■■□□ 2.99
AP001059.3-201ENST00000619053 ZCCHC6Q5VYS8 1495 aaKnown RBP33.63■■■□□ 2.97
AP001059.3-201ENST00000619053 DCAF1Q9Y4B6 1507 aa33.52■■■□□ 2.96
AP001059.3-201ENST00000619053 UNC13AQ9UPW8 1703 aa33.48■■■□□ 2.95
AP001059.3-201ENST00000619053 BICRAQ9NZM4 1560 aa33.14■■■□□ 2.9
AP001059.3-201ENST00000619053 PABPN1Q86U42 306 aaKnown RBP eCLIP33.12■■■□□ 2.89
AP001059.3-201ENST00000619053 DNAJC5BQ9UF47 199 aa32.91■■■□□ 2.86
AP001059.3-201ENST00000619053 SCRIBQ14160 1630 aa32.88■■■□□ 2.85
AP001059.3-201ENST00000619053 SHROOM4Q9ULL8 1493 aa32.82■■■□□ 2.84
AP001059.3-201ENST00000619053 EIF4G1Q04637 1599 aaKnown RBP32.28■■■□□ 2.76
AP001059.3-201ENST00000619053 CC2D2AQ9P2K1 1620 aa32.23■■■□□ 2.75
AP001059.3-201ENST00000619053 CECR2Q9BXF3 1484 aa32.02■■■□□ 2.72
AP001059.3-201ENST00000619053 SMARCA4P51532 1647 aa31.47■■■□□ 2.63
AP001059.3-201ENST00000619053 NCAPD3P42695 1498 aa31.4■■■□□ 2.62
AP001059.3-201ENST00000619053 BAZ1AQ9NRL2 1556 aaPredicted RBP31.39■■■□□ 2.61
AP001059.3-201ENST00000619053 SMARCA2P51531 1590 aa31.34■■■□□ 2.61
AP001059.3-201ENST00000619053 ATAD2BQ9ULI0 1458 aa31.34■■■□□ 2.61
AP001059.3-201ENST00000619053 HMGXB3Q12766 1538 aa31.25■■■□□ 2.59
AP001059.3-201ENST00000619053 PEG3Q9GZU2 1588 aa31.22■■■□□ 2.59
AP001059.3-201ENST00000619053 MROH2BQ7Z745 1585 aa31.13■■■□□ 2.57
AP001059.3-201ENST00000619053 BAZ1BQ9UIG0 1483 aaKnown RBP31.07■■■□□ 2.56
AP001059.3-201ENST00000619053 WIZO95785 1651 aa30.81■■■□□ 2.52
AP001059.3-201ENST00000619053 ERCC6Q03468 1493 aa30.69■■■□□ 2.5
AP001059.3-201ENST00000619053 NESP48681 1621 aa30.69■■■□□ 2.5
AP001059.3-201ENST00000619053 LAMC3Q9Y6N6 1575 aa30.66■■■□□ 2.5
AP001059.3-201ENST00000619053 RSF1Q96T23 1441 aaPredicted RBP30.65■■■□□ 2.5
AP001059.3-201ENST00000619053 CUX2O14529 1486 aa30.56■■■□□ 2.48
AP001059.3-201ENST00000619053 TOP2AP11388 1531 aaKnown RBP30.47■■■□□ 2.47
AP001059.3-201ENST00000619053 CADPSQ9ULU8 1353 aa30.44■■■□□ 2.46
AP001059.3-201ENST00000619053 PDS5BQ9NTI5 1447 aa30.41■■■□□ 2.46
AP001059.3-201ENST00000619053 KIF21AQ7Z4S6 1674 aa30.41■■■□□ 2.46
AP001059.3-201ENST00000619053 THOC2Q8NI27 1593 aaKnown RBP30.37■■■□□ 2.45
AP001059.3-201ENST00000619053 CFTRP13569 1480 aa30.21■■■□□ 2.43
AP001059.3-201ENST00000619053 MRC2Q9UBG0 1479 aa30.12■■■□□ 2.41
AP001059.3-201ENST00000619053 PRDM2Q13029 1718 aa30.11■■■□□ 2.41
AP001059.3-201ENST00000619053 CEP164Q9UPV0 1460 aa30.09■■■□□ 2.41
AP001059.3-201ENST00000619053 FANCD2Q9BXW9 1451 aa30.08■■■□□ 2.41
AP001059.3-201ENST00000619053 CCDC88BA6NC98 1476 aa30.07■■■□□ 2.4
AP001059.3-201ENST00000619053 WDR62O43379 1518 aa30.06■■■□□ 2.4
AP001059.3-201ENST00000619053 DNAJC5Q9H3Z4 198 aa29.95■■■□□ 2.39
AP001059.3-201ENST00000619053 URB2Q14146 1524 aaKnown RBP29.81■■■□□ 2.36
AP001059.3-201ENST00000619053 ABCC8Q09428 1581 aa29.62■■■□□ 2.33
AP001059.3-201ENST00000619053 TOPBP1Q92547 1522 aa29.59■■■□□ 2.33
AP001059.3-201ENST00000619053 DNMBPQ6XZF7 1577 aa29.56■■■□□ 2.32
AP001059.3-201ENST00000619053 SUPT5HO00267 1087 aaKnown RBP29.52■■■□□ 2.32
AP001059.3-201ENST00000619053 IFT140Q96RY7 1462 aa29.48■■■□□ 2.31
AP001059.3-201ENST00000619053 ZNF608Q9ULD9 1512 aaPredicted RBP29.34■■■□□ 2.29
AP001059.3-201ENST00000619053 TARBP1Q13395 1621 aaKnown RBP29.33■■■□□ 2.29
AP001059.3-201ENST00000619053 POLA1P09884 1462 aaPredicted RBP29.29■■■□□ 2.28
AP001059.3-201ENST00000619053 EIF4G3O43432 1585 aaKnown RBP29.26■■■□□ 2.28
AP001059.3-201ENST00000619053 CUX1P39880 1505 aa29.24■■■□□ 2.27
AP001059.3-201ENST00000619053 FGD5Q6ZNL6 1462 aa29.17■■■□□ 2.26
AP001059.3-201ENST00000619053 OSCARQ8IYS5 282 aa29.17■■■□□ 2.26
AP001059.3-201ENST00000619053 SOGA1O94964 1423 aa29.16■■■□□ 2.26
AP001059.3-201ENST00000619053 WDR97A6NE52 1622 aa29.14■■■□□ 2.26
AP001059.3-201ENST00000619053 RAD54L2Q9Y4B4 1467 aa29.14■■■□□ 2.26
AP001059.3-201ENST00000619053 AQRO60306 1485 aaKnown RBP eCLIP29.12■■■□□ 2.25
AP001059.3-201ENST00000619053 CHD1O14646 1710 aa29■■■□□ 2.23
AP001059.3-201ENST00000619053 TDRD9Q8NDG6 1382 aaKnown RBP29■■■□□ 2.23
AP001059.3-201ENST00000619053 BIVM-ERCC5R4GMW8 1640 aa28.98■■■□□ 2.23
AP001059.3-201ENST00000619053 TOP2BQ02880 1626 aa28.94■■■□□ 2.22
AP001059.3-201ENST00000619053 ABCA10Q8WWZ4 1543 aa28.92■■■□□ 2.22
AP001059.3-201ENST00000619053 WRNQ14191 1432 aaPredicted RBP eCLIP28.91■■■□□ 2.22
AP001059.3-201ENST00000619053 GRIN2BQ13224 1484 aa28.89■■■□□ 2.22
AP001059.3-201ENST00000619053 PBRM1Q86U86 1689 aa28.88■■■□□ 2.21
AP001059.3-201ENST00000619053 SYNJ1O43426 1573 aa28.88■■■□□ 2.21
AP001059.3-201ENST00000619053 MAGI1Q96QZ7 1491 aaPredicted RBP28.87■■■□□ 2.21
AP001059.3-201ENST00000619053 SNAPC4Q5SXM2 1469 aa28.86■■■□□ 2.21
AP001059.3-201ENST00000619053 ABCA5Q8WWZ7 1642 aa28.85■■■□□ 2.21
AP001059.3-201ENST00000619053 GAPVD1Q14C86 1478 aa28.84■■■□□ 2.21
AP001059.3-201ENST00000619053 RIMBP3CA6NJZ7 1639 aa28.8■■■□□ 2.2
AP001059.3-201ENST00000619053 RIMBP3BA6NNM3 1639 aa28.8■■■□□ 2.2
AP001059.3-201ENST00000619053 RIMBP3Q9UFD9 1639 aa28.8■■■□□ 2.2
AP001059.3-201ENST00000619053 FBLN2P98095 1184 aa28.77■■■□□ 2.2
AP001059.3-201ENST00000619053 SYNJ2O15056 1496 aa28.74■■■□□ 2.19
AP001059.3-201ENST00000619053 ARHGEF11O15085 1522 aa28.73■■■□□ 2.19
AP001059.3-201ENST00000619053 TRIM41Q8WV44 630 aa28.72■■■□□ 2.19
AP001059.3-201ENST00000619053 CHMP7Q8WUX9 453 aaPredicted RBP28.7■■■□□ 2.18
AP001059.3-201ENST00000619053 CLASP1Q7Z460 1538 aa28.65■■■□□ 2.18
AP001059.3-201ENST00000619053 ERICH3Q5RHP9 1530 aa28.59■■■□□ 2.17
AP001059.3-201ENST00000619053 ADAMTS12P58397 1594 aa28.58■■■□□ 2.17
AP001059.3-201ENST00000619053 GRIN2AQ12879 1464 aa28.51■■■□□ 2.15
AP001059.3-201ENST00000619053 FHAD1B1AJZ9 1412 aa28.5■■■□□ 2.15
AP001059.3-201ENST00000619053 ARAP1Q96P48 1450 aa28.46■■■□□ 2.15
AP001059.3-201ENST00000619053 NUP160Q12769 1436 aa28.41■■■□□ 2.14
AP001059.3-201ENST00000619053 CYB5RLQ6IPT4 315 aa28.4■■■□□ 2.14
AP001059.3-201ENST00000619053 CEP170Q5SW79 1584 aa28.39■■■□□ 2.14
AP001059.3-201ENST00000619053 KIF27Q86VH2 1401 aa28.35■■■□□ 2.13
AP001059.3-201ENST00000619053 SHROOM2Q13796 1616 aa28.29■■■□□ 2.12
AP001059.3-201ENST00000619053 CUL7Q14999 1698 aa28.29■■■□□ 2.12
AP001059.3-201ENST00000619053 IGF1RP08069 1367 aa28.25■■■□□ 2.11
AP001059.3-201ENST00000619053 ERCC6L2Q5T890 1561 aa28.17■■■□□ 2.1
AP001059.3-201ENST00000619053 RUSC2Q8N2Y8 1516 aa28.17■■■□□ 2.1
AP001059.3-201ENST00000619053 CARMIL1Q5VZK9 1371 aa28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 146.7 ms