RNA–Protein interactions for RNA: ENST00000494980.5

CHMP2B-205, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 3 BASIC

Gene CHMP2B, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-205ENST00000494980 NISCHQ9Y2I1 1504 aa38.38■■■■□ 3.73
CHMP2B-205ENST00000494980 ABCC9O60706 1549 aa36.44■■■■□ 3.42
CHMP2B-205ENST00000494980 DNAJC5BQ9UF47 199 aa35.37■■■■□ 3.25
CHMP2B-205ENST00000494980 CCDC180Q9P1Z9 1646 aa35.11■■■■□ 3.21
CHMP2B-205ENST00000494980 RB1CC1Q8TDY2 1594 aa34.06■■■■□ 3.04
CHMP2B-205ENST00000494980 PABPN1Q86U42 306 aaKnown RBP eCLIP33.66■■■□□ 2.98
CHMP2B-205ENST00000494980 DNAJC5Q9H3Z4 198 aa33.46■■■□□ 2.95
CHMP2B-205ENST00000494980 NACADO15069 1562 aa33.46■■■□□ 2.95
CHMP2B-205ENST00000494980 UNC13AQ9UPW8 1703 aa33.42■■■□□ 2.94
CHMP2B-205ENST00000494980 BICRAQ9NZM4 1560 aa33.15■■■□□ 2.9
CHMP2B-205ENST00000494980 CECR2Q9BXF3 1484 aa32.96■■■□□ 2.87
CHMP2B-205ENST00000494980 DCAF8L2P0C7V8 631 aa32.95■■■□□ 2.87
CHMP2B-205ENST00000494980 CC2D2AQ9P2K1 1620 aa32.87■■■□□ 2.85
CHMP2B-205ENST00000494980 SHROOM4Q9ULL8 1493 aa32.49■■■□□ 2.79
CHMP2B-205ENST00000494980 MYO15BQ96JP2 1530 aa32.49■■■□□ 2.79
CHMP2B-205ENST00000494980 EIF4G1Q04637 1599 aaKnown RBP32.45■■■□□ 2.78
CHMP2B-205ENST00000494980 CUX2O14529 1486 aa31.95■■■□□ 2.7
CHMP2B-205ENST00000494980 SCRIBQ14160 1630 aa31.93■■■□□ 2.7
CHMP2B-205ENST00000494980 DCAF1Q9Y4B6 1507 aa31.58■■■□□ 2.65
CHMP2B-205ENST00000494980 ERCC6Q03468 1493 aa31.56■■■□□ 2.64
CHMP2B-205ENST00000494980 ZCCHC6Q5VYS8 1495 aaKnown RBP31.52■■■□□ 2.64
CHMP2B-205ENST00000494980 TRIM41Q8WV44 630 aa31.48■■■□□ 2.63
CHMP2B-205ENST00000494980 THOC2Q8NI27 1593 aaKnown RBP30.92■■■□□ 2.54
CHMP2B-205ENST00000494980 NESP48681 1621 aa30.92■■■□□ 2.54
CHMP2B-205ENST00000494980 NCAPD3P42695 1498 aa30.87■■■□□ 2.53
CHMP2B-205ENST00000494980 SMARCA2P51531 1590 aa30.65■■■□□ 2.5
CHMP2B-205ENST00000494980 ATAD2BQ9ULI0 1458 aa30.62■■■□□ 2.49
CHMP2B-205ENST00000494980 HMGXB3Q12766 1538 aa30.57■■■□□ 2.49
CHMP2B-205ENST00000494980 KIF21AQ7Z4S6 1674 aa30.55■■■□□ 2.48
CHMP2B-205ENST00000494980 LAMC3Q9Y6N6 1575 aa30.45■■■□□ 2.47
CHMP2B-205ENST00000494980 BAZ1AQ9NRL2 1556 aaPredicted RBP30.41■■■□□ 2.46
CHMP2B-205ENST00000494980 SMARCA4P51532 1647 aa30.29■■■□□ 2.44
CHMP2B-205ENST00000494980 PDS5BQ9NTI5 1447 aa30.28■■■□□ 2.44
CHMP2B-205ENST00000494980 BAZ1BQ9UIG0 1483 aaKnown RBP30.26■■■□□ 2.44
CHMP2B-205ENST00000494980 OSCARQ8IYS5 282 aa30.18■■■□□ 2.42
CHMP2B-205ENST00000494980 MRC2Q9UBG0 1479 aa30.15■■■□□ 2.42
CHMP2B-205ENST00000494980 WDR62O43379 1518 aa30.14■■■□□ 2.42
CHMP2B-205ENST00000494980 RIMBP3CA6NJZ7 1639 aa30.1■■■□□ 2.41
CHMP2B-205ENST00000494980 RIMBP3BA6NNM3 1639 aa30.1■■■□□ 2.41
CHMP2B-205ENST00000494980 RIMBP3Q9UFD9 1639 aa30.1■■■□□ 2.41
CHMP2B-205ENST00000494980 PEG3Q9GZU2 1588 aa29.96■■■□□ 2.39
CHMP2B-205ENST00000494980 AEBP2Q6ZN18 517 aaPredicted RBP29.91■■■□□ 2.38
CHMP2B-205ENST00000494980 CADPSQ9ULU8 1353 aa29.86■■■□□ 2.37
CHMP2B-205ENST00000494980 ARHGEF11O15085 1522 aa29.82■■■□□ 2.36
CHMP2B-205ENST00000494980 CEP164Q9UPV0 1460 aa29.75■■■□□ 2.35
CHMP2B-205ENST00000494980 TRHP20396 242 aaPredicted RBP29.75■■■□□ 2.35
CHMP2B-205ENST00000494980 CYB5RLQ6IPT4 315 aa29.61■■■□□ 2.33
CHMP2B-205ENST00000494980 MROH2BQ7Z745 1585 aa29.58■■■□□ 2.33
CHMP2B-205ENST00000494980 FANCD2Q9BXW9 1451 aa29.58■■■□□ 2.33
CHMP2B-205ENST00000494980 URB2Q14146 1524 aaKnown RBP29.45■■■□□ 2.31
CHMP2B-205ENST00000494980 ARAP1Q96P48 1450 aa29.43■■■□□ 2.3
CHMP2B-205ENST00000494980 ZNF608Q9ULD9 1512 aaPredicted RBP29.32■■■□□ 2.28
CHMP2B-205ENST00000494980 CFTRP13569 1480 aa29.25■■■□□ 2.27
CHMP2B-205ENST00000494980 CHD1O14646 1710 aa29.22■■■□□ 2.27
CHMP2B-205ENST00000494980 WIZO95785 1651 aa29.2■■■□□ 2.26
CHMP2B-205ENST00000494980 IFT140Q96RY7 1462 aa29.18■■■□□ 2.26
CHMP2B-205ENST00000494980 EIF4G3O43432 1585 aaKnown RBP29.13■■■□□ 2.25
CHMP2B-205ENST00000494980 RSF1Q96T23 1441 aaPredicted RBP29.13■■■□□ 2.25
CHMP2B-205ENST00000494980 PRDM2Q13029 1718 aa28.99■■■□□ 2.23
CHMP2B-205ENST00000494980 FBLN2P98095 1184 aa28.91■■■□□ 2.22
CHMP2B-205ENST00000494980 TOPBP1Q92547 1522 aa28.88■■■□□ 2.21
CHMP2B-205ENST00000494980 ILDR1Q86SU0 546 aaPredicted RBP28.87■■■□□ 2.21
CHMP2B-205ENST00000494980 AQRO60306 1485 aaKnown RBP eCLIP28.85■■■□□ 2.21
CHMP2B-205ENST00000494980 CLASP1Q7Z460 1538 aa28.78■■■□□ 2.2
CHMP2B-205ENST00000494980 TARBP1Q13395 1621 aaKnown RBP28.76■■■□□ 2.19
CHMP2B-205ENST00000494980 TOP2AP11388 1531 aaKnown RBP28.7■■■□□ 2.19
CHMP2B-205ENST00000494980 DNMBPQ6XZF7 1577 aa28.66■■■□□ 2.18
CHMP2B-205ENST00000494980 ABCC8Q09428 1581 aa28.65■■■□□ 2.18
CHMP2B-205ENST00000494980 SYNJ1O43426 1573 aa28.62■■■□□ 2.17
CHMP2B-205ENST00000494980 GAPVD1Q14C86 1478 aa28.55■■■□□ 2.16
CHMP2B-205ENST00000494980 SNAPC4Q5SXM2 1469 aa28.54■■■□□ 2.16
CHMP2B-205ENST00000494980 POLA1P09884 1462 aaPredicted RBP28.49■■■□□ 2.15
CHMP2B-205ENST00000494980 CHMP7Q8WUX9 453 aaPredicted RBP28.44■■■□□ 2.14
CHMP2B-205ENST00000494980 TDRD9Q8NDG6 1382 aaKnown RBP28.43■■■□□ 2.14
CHMP2B-205ENST00000494980 RAD54L2Q9Y4B4 1467 aa28.41■■■□□ 2.14
CHMP2B-205ENST00000494980 KIF13AQ9H1H9 1805 aa28.4■■■□□ 2.14
CHMP2B-205ENST00000494980 MAGI1Q96QZ7 1491 aaPredicted RBP28.38■■■□□ 2.13
CHMP2B-205ENST00000494980 CCDC88BA6NC98 1476 aa28.35■■■□□ 2.13
CHMP2B-205ENST00000494980 WDR97A6NE52 1622 aa28.32■■■□□ 2.12
CHMP2B-205ENST00000494980 SYNJ2O15056 1496 aa28.3■■■□□ 2.12
CHMP2B-205ENST00000494980 SOGA1O94964 1423 aa28.28■■■□□ 2.12
CHMP2B-205ENST00000494980 KDM4FA0A1W2PPD8 638 aa28.28■■■□□ 2.12
CHMP2B-205ENST00000494980 ERCC6L2Q5T890 1561 aa28.26■■■□□ 2.11
CHMP2B-205ENST00000494980 GRIN2BQ13224 1484 aa28.22■■■□□ 2.11
CHMP2B-205ENST00000494980 PBRM1Q86U86 1689 aa28.13■■■□□ 2.09
CHMP2B-205ENST00000494980 FGD5Q6ZNL6 1462 aa28.12■■■□□ 2.09
CHMP2B-205ENST00000494980 CEP170Q5SW79 1584 aa28.04■■■□□ 2.08
CHMP2B-205ENST00000494980 KDM6BO15054 1643 aa28.03■■■□□ 2.08
CHMP2B-205ENST00000494980 FAM69CQ0P6D2 419 aa27.95■■■□□ 2.06
CHMP2B-205ENST00000494980 ABCC10Q5T3U5 1492 aa27.94■■■□□ 2.06
CHMP2B-205ENST00000494980 SHROOM2Q13796 1616 aa27.92■■■□□ 2.06
CHMP2B-205ENST00000494980 DIP2BQ9P265 1576 aa27.9■■■□□ 2.06
CHMP2B-205ENST00000494980 HECW2Q9P2P5 1572 aa27.9■■■□□ 2.06
CHMP2B-205ENST00000494980 GRIN2AQ12879 1464 aa27.89■■■□□ 2.05
CHMP2B-205ENST00000494980 CUX1P39880 1505 aa27.88■■■□□ 2.05
CHMP2B-205ENST00000494980 TSPOAP1O95153 1857 aa27.85■■■□□ 2.05
CHMP2B-205ENST00000494980 ABCA5Q8WWZ7 1642 aa27.85■■■□□ 2.05
CHMP2B-205ENST00000494980 NUP160Q12769 1436 aa27.83■■■□□ 2.05
CHMP2B-205ENST00000494980 MAPKBP1O60336 1514 aa27.79■■■□□ 2.04
CHMP2B-205ENST00000494980 ADGRL1O94910 1474 aa27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms