RNA–Protein interactions for RNA: ENST00000331238.6

RTN4RL1-201, Transcript of reticulon 4 receptor like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4RL1, Length 3,625 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4RL1-201ENST00000331238 NISCHQ9Y2I1 1504 aa30.59■■■□□ 2.49
RTN4RL1-201ENST00000331238 DCAF8L2P0C7V8 631 aa28.19■■■□□ 2.1
RTN4RL1-201ENST00000331238 SHROOM4Q9ULL8 1493 aa27.51■■□□□ 1.99
RTN4RL1-201ENST00000331238 SUPT5HO00267 1087 aaKnown RBP27.39■■□□□ 1.98
RTN4RL1-201ENST00000331238 ABCC9O60706 1549 aa26.26■■□□□ 1.79
RTN4RL1-201ENST00000331238 PCGF6Q9BYE7 350 aa26.26■■□□□ 1.79
RTN4RL1-201ENST00000331238 CHIC1Q5VXU3 224 aa25.99■■□□□ 1.75
RTN4RL1-201ENST00000331238 HRCP23327 699 aa25.9■■□□□ 1.74
RTN4RL1-201ENST00000331238 EHMT2Q96KQ7 1210 aa25.78■■□□□ 1.72
RTN4RL1-201ENST00000331238 PPARGC1BQ86YN6 1023 aaKnown RBP25.74■■□□□ 1.71
RTN4RL1-201ENST00000331238 LOC105371045A0A1W2PR82 267 aa25.7■■□□□ 1.7
RTN4RL1-201ENST00000331238 CCDC180Q9P1Z9 1646 aa25.64■■□□□ 1.7
RTN4RL1-201ENST00000331238 FAM9AQ8IZU1 332 aaPredicted RBP25.55■■□□□ 1.68
RTN4RL1-201ENST00000331238 PABPN1Q86U42 306 aaKnown RBP eCLIP25.49■■□□□ 1.67
RTN4RL1-201ENST00000331238 MYO15BQ96JP2 1530 aa25.47■■□□□ 1.67
RTN4RL1-201ENST00000331238 ZCCHC6Q5VYS8 1495 aaKnown RBP25.47■■□□□ 1.67
RTN4RL1-201ENST00000331238 TRIM41Q8WV44 630 aa25.2■■□□□ 1.62
RTN4RL1-201ENST00000331238 TRIM26Q12899 539 aaPredicted RBP25.18■■□□□ 1.62
RTN4RL1-201ENST00000331238 SCRIBQ14160 1630 aa25.1■■□□□ 1.61
RTN4RL1-201ENST00000331238 TTBK1Q5TCY1 1321 aaPredicted RBP24.97■■□□□ 1.59
RTN4RL1-201ENST00000331238 ZEB1P37275 1124 aaPredicted RBP24.84■■□□□ 1.57
RTN4RL1-201ENST00000331238 DCAF1Q9Y4B6 1507 aa24.73■■□□□ 1.55
RTN4RL1-201ENST00000331238 CCER1Q8TC90 406 aaPredicted RBP24.66■■□□□ 1.54
RTN4RL1-201ENST00000331238 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.53■■□□□ 1.52
RTN4RL1-201ENST00000331238 RB1CC1Q8TDY2 1594 aa24.44■■□□□ 1.5
RTN4RL1-201ENST00000331238 NACADO15069 1562 aa24.4■■□□□ 1.5
RTN4RL1-201ENST00000331238 CECR2Q9BXF3 1484 aa24.4■■□□□ 1.5
RTN4RL1-201ENST00000331238 UBTFP17480 764 aaKnown RBP24.26■■□□□ 1.47
RTN4RL1-201ENST00000331238 RSF1Q96T23 1441 aaPredicted RBP24.25■■□□□ 1.47
RTN4RL1-201ENST00000331238 PELP1Q8IZL8 1130 aaKnown RBP24.24■■□□□ 1.47
RTN4RL1-201ENST00000331238 RANGAP1P46060 587 aaPredicted RBP24.23■■□□□ 1.47
RTN4RL1-201ENST00000331238 YTHDC1Q96MU7 727 aaKnown RBP24.18■■□□□ 1.46
RTN4RL1-201ENST00000331238 SCAF1Q9H7N4 1312 aaKnown RBP24.17■■□□□ 1.46
RTN4RL1-201ENST00000331238 CENPBP07199 599 aaPredicted RBP24.17■■□□□ 1.46
RTN4RL1-201ENST00000331238 DIEXFQ68CQ4 756 aaKnown RBP24.09■■□□□ 1.45
RTN4RL1-201ENST00000331238 APLP2Q06481 763 aa23.98■■□□□ 1.43
RTN4RL1-201ENST00000331238 MROH2BQ7Z745 1585 aa23.98■■□□□ 1.43
RTN4RL1-201ENST00000331238 HNRNPUL2Q1KMD3 747 aaKnown RBP23.97■■□□□ 1.43
RTN4RL1-201ENST00000331238 GTF3C3Q9Y5Q9 886 aa23.95■■□□□ 1.42
RTN4RL1-201ENST00000331238 ACIN1Q9UKV3 1341 aaKnown RBP23.91■■□□□ 1.42
RTN4RL1-201ENST00000331238 NEUROD1Q13562 356 aa23.91■■□□□ 1.42
RTN4RL1-201ENST00000331238 WIZO95785 1651 aa23.73■■□□□ 1.39
RTN4RL1-201ENST00000331238 CSRNP3Q8WYN3 585 aa23.65■■□□□ 1.38
RTN4RL1-201ENST00000331238 ZNF316A6NFI3 1004 aaPredicted RBP23.62■■□□□ 1.37
RTN4RL1-201ENST00000331238 BAZ1AQ9NRL2 1556 aaPredicted RBP23.58■■□□□ 1.37
RTN4RL1-201ENST00000331238 DNAJC5BQ9UF47 199 aa23.49■■□□□ 1.35
RTN4RL1-201ENST00000331238 ITGAEP38570 1179 aa23.48■■□□□ 1.35
RTN4RL1-201ENST00000331238 CEP162Q5TB80 1403 aa23.47■■□□□ 1.35
RTN4RL1-201ENST00000331238 BAZ1BQ9UIG0 1483 aaKnown RBP23.46■■□□□ 1.35
RTN4RL1-201ENST00000331238 BICRAQ9NZM4 1560 aa23.45■■□□□ 1.34
RTN4RL1-201ENST00000331238 UNC13AQ9UPW8 1703 aa23.41■■□□□ 1.34
RTN4RL1-201ENST00000331238 MIER1Q8N108 512 aa23.4■■□□□ 1.34
RTN4RL1-201ENST00000331238 CCDC88BA6NC98 1476 aa23.39■■□□□ 1.34
RTN4RL1-201ENST00000331238 SOGA1O94964 1423 aa23.39■■□□□ 1.34
RTN4RL1-201ENST00000331238 ATP1B4Q9UN42 357 aaPredicted RBP23.39■■□□□ 1.33
RTN4RL1-201ENST00000331238 ABCC8Q09428 1581 aa23.37■■□□□ 1.33
RTN4RL1-201ENST00000331238 SMARCA4P51532 1647 aa23.36■■□□□ 1.33
RTN4RL1-201ENST00000331238 ATAD2BQ9ULI0 1458 aa23.28■■□□□ 1.32
RTN4RL1-201ENST00000331238 TNIKQ9UKE5 1360 aa23.24■■□□□ 1.31
RTN4RL1-201ENST00000331238 RUSC2Q8N2Y8 1516 aa23.15■■□□□ 1.3
RTN4RL1-201ENST00000331238 MYT1Q01538 1121 aa23.12■■□□□ 1.29
RTN4RL1-201ENST00000331238 EIF4G1Q04637 1599 aaKnown RBP23.11■■□□□ 1.29
RTN4RL1-201ENST00000331238 CLIP1P30622 1438 aa23.11■■□□□ 1.29
RTN4RL1-201ENST00000331238 GOLGA3Q08378 1498 aa23.09■■□□□ 1.29
RTN4RL1-201ENST00000331238 P3H3Q8IVL6 736 aa23.08■■□□□ 1.29
RTN4RL1-201ENST00000331238 TOP2AP11388 1531 aaKnown RBP23.08■■□□□ 1.28
RTN4RL1-201ENST00000331238 WRNQ14191 1432 aaPredicted RBP eCLIP23.05■■□□□ 1.28
RTN4RL1-201ENST00000331238 FBLN2P98095 1184 aa23.05■■□□□ 1.28
RTN4RL1-201ENST00000331238 BCANQ96GW7 911 aa23.01■■□□□ 1.27
RTN4RL1-201ENST00000331238 EEA1Q15075 1411 aa23.01■■□□□ 1.27
RTN4RL1-201ENST00000331238 SMARCA2P51531 1590 aa22.99■■□□□ 1.27
RTN4RL1-201ENST00000331238 ARID3CA6NKF2 412 aa22.94■■□□□ 1.26
RTN4RL1-201ENST00000331238 FAM50AQ14320 339 aaKnown RBP22.9■■□□□ 1.26
RTN4RL1-201ENST00000331238 CEP164Q9UPV0 1460 aa22.87■■□□□ 1.25
RTN4RL1-201ENST00000331238 CC2D2AQ9P2K1 1620 aa22.86■■□□□ 1.25
RTN4RL1-201ENST00000331238 NESP48681 1621 aa22.83■■□□□ 1.25
RTN4RL1-201ENST00000331238 NEFLP07196 543 aa22.83■■□□□ 1.25
RTN4RL1-201ENST00000331238 KANK4Q5T7N3 995 aaPredicted RBP22.77■■□□□ 1.24
RTN4RL1-201ENST00000331238 NCAPD3P42695 1498 aa22.77■■□□□ 1.24
RTN4RL1-201ENST00000331238 VPS8Q8N3P4 1428 aa22.76■■□□□ 1.23
RTN4RL1-201ENST00000331238 DDX10Q13206 875 aaKnown RBP22.75■■□□□ 1.23
RTN4RL1-201ENST00000331238 HIRIP3Q9BW71 556 aaPredicted RBP22.74■■□□□ 1.23
RTN4RL1-201ENST00000331238 CADPSQ9ULU8 1353 aa22.74■■□□□ 1.23
RTN4RL1-201ENST00000331238 RAPGEF2Q9Y4G8 1499 aa22.69■■□□□ 1.22
RTN4RL1-201ENST00000331238 SUPT16HQ9Y5B9 1047 aaKnown RBP22.66■■□□□ 1.22
RTN4RL1-201ENST00000331238 TDRD9Q8NDG6 1382 aaKnown RBP22.64■■□□□ 1.22
RTN4RL1-201ENST00000331238 FKBP8Q14318 412 aa22.64■■□□□ 1.21
RTN4RL1-201ENST00000331238 TRIM52Q96A61 297 aa22.59■■□□□ 1.21
RTN4RL1-201ENST00000331238 ERCC6Q03468 1493 aa22.57■■□□□ 1.2
RTN4RL1-201ENST00000331238 KCNH8Q96L42 1107 aa22.57■■□□□ 1.2
RTN4RL1-201ENST00000331238 SIN3AQ96ST3 1273 aa22.56■■□□□ 1.2
RTN4RL1-201ENST00000331238 CUX2O14529 1486 aa22.56■■□□□ 1.2
RTN4RL1-201ENST00000331238 CNGB1Q14028 1251 aaPredicted RBP22.56■■□□□ 1.2
RTN4RL1-201ENST00000331238 DHX57Q6P158 1386 aaKnown RBP22.53■■□□□ 1.2
RTN4RL1-201ENST00000331238 FANCD2Q9BXW9 1451 aa22.52■■□□□ 1.2
RTN4RL1-201ENST00000331238 ANP32CO43423 234 aa22.51■■□□□ 1.19
RTN4RL1-201ENST00000331238 CLSPNQ9HAW4 1339 aa22.48■■□□□ 1.19
RTN4RL1-201ENST00000331238 ERICH6Q7L0X2 663 aa22.48■■□□□ 1.19
RTN4RL1-201ENST00000331238 RAD54L2Q9Y4B4 1467 aa22.47■■□□□ 1.19
RTN4RL1-201ENST00000331238 SYNJ1O43426 1573 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms