RNA–Protein interactions for RNA: ENST00000532453.1

AF131215.3-201, humanhuman

TSL 1 (best) BASIC

Gene AF131215.3, Length 639 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AF131215.3-201ENST00000532453 NISCHQ9Y2I1 1504 aa40.62■■■■■ 4.09
AF131215.3-201ENST00000532453 CCDC180Q9P1Z9 1646 aa35.98■■■■□ 3.35
AF131215.3-201ENST00000532453 ABCC9O60706 1549 aa35.34■■■■□ 3.25
AF131215.3-201ENST00000532453 DCAF8L2P0C7V8 631 aa34.12■■■■□ 3.05
AF131215.3-201ENST00000532453 RB1CC1Q8TDY2 1594 aa33.91■■■■□ 3.02
AF131215.3-201ENST00000532453 NACADO15069 1562 aa33.89■■■■□ 3.02
AF131215.3-201ENST00000532453 ZCCHC6Q5VYS8 1495 aaKnown RBP33.8■■■■□ 3
AF131215.3-201ENST00000532453 MYO15BQ96JP2 1530 aa33.65■■■□□ 2.98
AF131215.3-201ENST00000532453 DCAF1Q9Y4B6 1507 aa33.54■■■□□ 2.96
AF131215.3-201ENST00000532453 PABPN1Q86U42 306 aaKnown RBP eCLIP33.13■■■□□ 2.89
AF131215.3-201ENST00000532453 UNC13AQ9UPW8 1703 aa33.13■■■□□ 2.89
AF131215.3-201ENST00000532453 SCRIBQ14160 1630 aa32.93■■■□□ 2.86
AF131215.3-201ENST00000532453 BICRAQ9NZM4 1560 aa32.92■■■□□ 2.86
AF131215.3-201ENST00000532453 DNAJC5BQ9UF47 199 aa32.52■■■□□ 2.8
AF131215.3-201ENST00000532453 SHROOM4Q9ULL8 1493 aa32.46■■■□□ 2.79
AF131215.3-201ENST00000532453 EIF4G1Q04637 1599 aaKnown RBP32.03■■■□□ 2.72
AF131215.3-201ENST00000532453 CC2D2AQ9P2K1 1620 aa31.92■■■□□ 2.7
AF131215.3-201ENST00000532453 CECR2Q9BXF3 1484 aa31.72■■■□□ 2.67
AF131215.3-201ENST00000532453 SMARCA4P51532 1647 aa31.47■■■□□ 2.63
AF131215.3-201ENST00000532453 BAZ1AQ9NRL2 1556 aaPredicted RBP31.44■■■□□ 2.62
AF131215.3-201ENST00000532453 ATAD2BQ9ULI0 1458 aa31.34■■■□□ 2.61
AF131215.3-201ENST00000532453 MROH2BQ7Z745 1585 aa31.34■■■□□ 2.61
AF131215.3-201ENST00000532453 NCAPD3P42695 1498 aa31.32■■■□□ 2.6
AF131215.3-201ENST00000532453 SMARCA2P51531 1590 aa31.25■■■□□ 2.59
AF131215.3-201ENST00000532453 PEG3Q9GZU2 1588 aa31.13■■■□□ 2.57
AF131215.3-201ENST00000532453 HMGXB3Q12766 1538 aa31.08■■■□□ 2.57
AF131215.3-201ENST00000532453 BAZ1BQ9UIG0 1483 aaKnown RBP31.07■■■□□ 2.56
AF131215.3-201ENST00000532453 RSF1Q96T23 1441 aaPredicted RBP31■■■□□ 2.55
AF131215.3-201ENST00000532453 WIZO95785 1651 aa30.98■■■□□ 2.55
AF131215.3-201ENST00000532453 TOP2AP11388 1531 aaKnown RBP30.61■■■□□ 2.49
AF131215.3-201ENST00000532453 NESP48681 1621 aa30.59■■■□□ 2.49
AF131215.3-201ENST00000532453 CADPSQ9ULU8 1353 aa30.43■■■□□ 2.46
AF131215.3-201ENST00000532453 LAMC3Q9Y6N6 1575 aa30.43■■■□□ 2.46
AF131215.3-201ENST00000532453 ERCC6Q03468 1493 aa30.43■■■□□ 2.46
AF131215.3-201ENST00000532453 SUPT5HO00267 1087 aaKnown RBP30.36■■■□□ 2.45
AF131215.3-201ENST00000532453 CCDC88BA6NC98 1476 aa30.33■■■□□ 2.45
AF131215.3-201ENST00000532453 PDS5BQ9NTI5 1447 aa30.28■■■□□ 2.44
AF131215.3-201ENST00000532453 CFTRP13569 1480 aa30.23■■■□□ 2.43
AF131215.3-201ENST00000532453 KIF21AQ7Z4S6 1674 aa30.15■■■□□ 2.42
AF131215.3-201ENST00000532453 FANCD2Q9BXW9 1451 aa30.06■■■□□ 2.4
AF131215.3-201ENST00000532453 CUX2O14529 1486 aa30.04■■■□□ 2.4
AF131215.3-201ENST00000532453 THOC2Q8NI27 1593 aaKnown RBP30.02■■■□□ 2.4
AF131215.3-201ENST00000532453 CEP164Q9UPV0 1460 aa29.99■■■□□ 2.39
AF131215.3-201ENST00000532453 MRC2Q9UBG0 1479 aa29.94■■■□□ 2.38
AF131215.3-201ENST00000532453 PRDM2Q13029 1718 aa29.87■■■□□ 2.37
AF131215.3-201ENST00000532453 WDR62O43379 1518 aa29.81■■■□□ 2.36
AF131215.3-201ENST00000532453 URB2Q14146 1524 aaKnown RBP29.76■■■□□ 2.36
AF131215.3-201ENST00000532453 TOPBP1Q92547 1522 aa29.58■■■□□ 2.33
AF131215.3-201ENST00000532453 ABCC8Q09428 1581 aa29.55■■■□□ 2.32
AF131215.3-201ENST00000532453 DNMBPQ6XZF7 1577 aa29.51■■■□□ 2.31
AF131215.3-201ENST00000532453 CUX1P39880 1505 aa29.37■■■□□ 2.29
AF131215.3-201ENST00000532453 IFT140Q96RY7 1462 aa29.36■■■□□ 2.29
AF131215.3-201ENST00000532453 POLA1P09884 1462 aaPredicted RBP29.33■■■□□ 2.29
AF131215.3-201ENST00000532453 ZNF608Q9ULD9 1512 aaPredicted RBP29.29■■■□□ 2.28
AF131215.3-201ENST00000532453 FGD5Q6ZNL6 1462 aa29.27■■■□□ 2.28
AF131215.3-201ENST00000532453 SOGA1O94964 1423 aa29.27■■■□□ 2.28
AF131215.3-201ENST00000532453 RAD54L2Q9Y4B4 1467 aa29.26■■■□□ 2.27
AF131215.3-201ENST00000532453 TARBP1Q13395 1621 aaKnown RBP29.23■■■□□ 2.27
AF131215.3-201ENST00000532453 DNAJC5Q9H3Z4 198 aa29.21■■■□□ 2.27
AF131215.3-201ENST00000532453 WRNQ14191 1432 aaPredicted RBP eCLIP29.2■■■□□ 2.27
AF131215.3-201ENST00000532453 AQRO60306 1485 aaKnown RBP eCLIP29.16■■■□□ 2.26
AF131215.3-201ENST00000532453 TDRD9Q8NDG6 1382 aaKnown RBP29.13■■■□□ 2.25
AF131215.3-201ENST00000532453 SYNJ1O43426 1573 aa29.11■■■□□ 2.25
AF131215.3-201ENST00000532453 EIF4G3O43432 1585 aaKnown RBP29.09■■■□□ 2.25
AF131215.3-201ENST00000532453 TOP2BQ02880 1626 aa29.09■■■□□ 2.25
AF131215.3-201ENST00000532453 BIVM-ERCC5R4GMW8 1640 aa29.06■■■□□ 2.24
AF131215.3-201ENST00000532453 ABCA10Q8WWZ4 1543 aa28.96■■■□□ 2.23
AF131215.3-201ENST00000532453 WDR97A6NE52 1622 aa28.94■■■□□ 2.22
AF131215.3-201ENST00000532453 OSCARQ8IYS5 282 aa28.93■■■□□ 2.22
AF131215.3-201ENST00000532453 GAPVD1Q14C86 1478 aa28.89■■■□□ 2.22
AF131215.3-201ENST00000532453 GRIN2BQ13224 1484 aa28.86■■■□□ 2.21
AF131215.3-201ENST00000532453 FBLN2P98095 1184 aa28.86■■■□□ 2.21
AF131215.3-201ENST00000532453 SNAPC4Q5SXM2 1469 aa28.82■■■□□ 2.2
AF131215.3-201ENST00000532453 ABCA5Q8WWZ7 1642 aa28.81■■■□□ 2.2
AF131215.3-201ENST00000532453 MAGI1Q96QZ7 1491 aaPredicted RBP28.75■■■□□ 2.19
AF131215.3-201ENST00000532453 CHMP7Q8WUX9 453 aaPredicted RBP28.75■■■□□ 2.19
AF131215.3-201ENST00000532453 PBRM1Q86U86 1689 aa28.74■■■□□ 2.19
AF131215.3-201ENST00000532453 CHD1O14646 1710 aa28.72■■■□□ 2.19
AF131215.3-201ENST00000532453 SYNJ2O15056 1496 aa28.66■■■□□ 2.18
AF131215.3-201ENST00000532453 TRIM41Q8WV44 630 aa28.65■■■□□ 2.18
AF131215.3-201ENST00000532453 KIF27Q86VH2 1401 aa28.6■■■□□ 2.17
AF131215.3-201ENST00000532453 ERICH3Q5RHP9 1530 aa28.59■■■□□ 2.17
AF131215.3-201ENST00000532453 FHAD1B1AJZ9 1412 aa28.54■■■□□ 2.16
AF131215.3-201ENST00000532453 IGF1RP08069 1367 aa28.53■■■□□ 2.16
AF131215.3-201ENST00000532453 ADAMTS12P58397 1594 aa28.53■■■□□ 2.16
AF131215.3-201ENST00000532453 GRIN2AQ12879 1464 aa28.48■■■□□ 2.15
AF131215.3-201ENST00000532453 RUSC2Q8N2Y8 1516 aa28.43■■■□□ 2.14
AF131215.3-201ENST00000532453 CLASP1Q7Z460 1538 aa28.41■■■□□ 2.14
AF131215.3-201ENST00000532453 ARHGEF11O15085 1522 aa28.37■■■□□ 2.13
AF131215.3-201ENST00000532453 RIMBP3CA6NJZ7 1639 aa28.36■■■□□ 2.13
AF131215.3-201ENST00000532453 RIMBP3BA6NNM3 1639 aa28.36■■■□□ 2.13
AF131215.3-201ENST00000532453 RIMBP3Q9UFD9 1639 aa28.36■■■□□ 2.13
AF131215.3-201ENST00000532453 NUP160Q12769 1436 aa28.35■■■□□ 2.13
AF131215.3-201ENST00000532453 CARMIL1Q5VZK9 1371 aa28.35■■■□□ 2.13
AF131215.3-201ENST00000532453 CEP170Q5SW79 1584 aa28.34■■■□□ 2.13
AF131215.3-201ENST00000532453 CHIC1Q5VXU3 224 aa28.33■■■□□ 2.13
AF131215.3-201ENST00000532453 CUL7Q14999 1698 aa28.31■■■□□ 2.12
AF131215.3-201ENST00000532453 CYB5RLQ6IPT4 315 aa28.24■■■□□ 2.11
AF131215.3-201ENST00000532453 JPH4Q96JJ6 628 aa28.18■■■□□ 2.1
AF131215.3-201ENST00000532453 ARAP1Q96P48 1450 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms