RNA–Protein interactions for RNA: ENST00000366878.8

SUSD4-204, Transcript of sushi domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUSD4, Length 3,025 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD4-204ENST00000366878 NISCHQ9Y2I1 1504 aa30.35■■■□□ 2.45
SUSD4-204ENST00000366878 HRCP23327 699 aa26.91■■□□□ 1.9
SUSD4-204ENST00000366878 SHROOM4Q9ULL8 1493 aa26.52■■□□□ 1.84
SUSD4-204ENST00000366878 SUPT5HO00267 1087 aaKnown RBP26.41■■□□□ 1.82
SUSD4-204ENST00000366878 MYO15BQ96JP2 1530 aa26.34■■□□□ 1.81
SUSD4-204ENST00000366878 PCGF6Q9BYE7 350 aa26.24■■□□□ 1.79
SUSD4-204ENST00000366878 PPARGC1BQ86YN6 1023 aaKnown RBP26.18■■□□□ 1.78
SUSD4-204ENST00000366878 CHIC1Q5VXU3 224 aa26.14■■□□□ 1.78
SUSD4-204ENST00000366878 PELP1Q8IZL8 1130 aaKnown RBP25.99■■□□□ 1.75
SUSD4-204ENST00000366878 DCAF1Q9Y4B6 1507 aa25.93■■□□□ 1.74
SUSD4-204ENST00000366878 ZCCHC6Q5VYS8 1495 aaKnown RBP25.86■■□□□ 1.73
SUSD4-204ENST00000366878 CCDC180Q9P1Z9 1646 aa25.63■■□□□ 1.69
SUSD4-204ENST00000366878 TRIM26Q12899 539 aaPredicted RBP25.55■■□□□ 1.68
SUSD4-204ENST00000366878 LOC105371045A0A1W2PR82 267 aa25.41■■□□□ 1.66
SUSD4-204ENST00000366878 ZEB1P37275 1124 aaPredicted RBP25.4■■□□□ 1.66
SUSD4-204ENST00000366878 SCAF1Q9H7N4 1312 aaKnown RBP25.37■■□□□ 1.65
SUSD4-204ENST00000366878 MYT1Q01538 1121 aa25.01■■□□□ 1.59
SUSD4-204ENST00000366878 DCAF8L2P0C7V8 631 aa24.86■■□□□ 1.57
SUSD4-204ENST00000366878 ACIN1Q9UKV3 1341 aaKnown RBP24.81■■□□□ 1.56
SUSD4-204ENST00000366878 NEUROD1Q13562 356 aa24.68■■□□□ 1.54
SUSD4-204ENST00000366878 ABCC9O60706 1549 aa24.6■■□□□ 1.53
SUSD4-204ENST00000366878 GTF3C3Q9Y5Q9 886 aa24.53■■□□□ 1.52
SUSD4-204ENST00000366878 TRIM41Q8WV44 630 aa24.53■■□□□ 1.52
SUSD4-204ENST00000366878 CENPBP07199 599 aaPredicted RBP24.51■■□□□ 1.51
SUSD4-204ENST00000366878 DIEXFQ68CQ4 756 aaKnown RBP24.37■■□□□ 1.49
SUSD4-204ENST00000366878 RSF1Q96T23 1441 aaPredicted RBP24.37■■□□□ 1.49
SUSD4-204ENST00000366878 FAM9AQ8IZU1 332 aaPredicted RBP24.37■■□□□ 1.49
SUSD4-204ENST00000366878 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.32■■□□□ 1.48
SUSD4-204ENST00000366878 CCER1Q8TC90 406 aaPredicted RBP24.32■■□□□ 1.48
SUSD4-204ENST00000366878 RB1CC1Q8TDY2 1594 aa24.28■■□□□ 1.48
SUSD4-204ENST00000366878 EHMT2Q96KQ7 1210 aa24.14■■□□□ 1.45
SUSD4-204ENST00000366878 SCRIBQ14160 1630 aa23.96■■□□□ 1.43
SUSD4-204ENST00000366878 ZNF316A6NFI3 1004 aaPredicted RBP23.96■■□□□ 1.43
SUSD4-204ENST00000366878 WRNQ14191 1432 aaPredicted RBP eCLIP23.91■■□□□ 1.42
SUSD4-204ENST00000366878 YTHDC1Q96MU7 727 aaKnown RBP23.83■■□□□ 1.4
SUSD4-204ENST00000366878 MIER1Q8N108 512 aa23.73■■□□□ 1.39
SUSD4-204ENST00000366878 EIF4G1Q04637 1599 aaKnown RBP23.7■■□□□ 1.39
SUSD4-204ENST00000366878 CEP162Q5TB80 1403 aa23.66■■□□□ 1.38
SUSD4-204ENST00000366878 MROH2BQ7Z745 1585 aa23.66■■□□□ 1.38
SUSD4-204ENST00000366878 CECR2Q9BXF3 1484 aa23.63■■□□□ 1.37
SUSD4-204ENST00000366878 TTBK1Q5TCY1 1321 aaPredicted RBP23.61■■□□□ 1.37
SUSD4-204ENST00000366878 WIZO95785 1651 aa23.59■■□□□ 1.37
SUSD4-204ENST00000366878 CLSPNQ9HAW4 1339 aa23.56■■□□□ 1.36
SUSD4-204ENST00000366878 TNIKQ9UKE5 1360 aa23.55■■□□□ 1.36
SUSD4-204ENST00000366878 BAZ1AQ9NRL2 1556 aaPredicted RBP23.53■■□□□ 1.36
SUSD4-204ENST00000366878 CCDC88BA6NC98 1476 aa23.44■■□□□ 1.34
SUSD4-204ENST00000366878 SUPT16HQ9Y5B9 1047 aaKnown RBP23.42■■□□□ 1.34
SUSD4-204ENST00000366878 ABCC8Q09428 1581 aa23.39■■□□□ 1.33
SUSD4-204ENST00000366878 ANP32EQ9BTT0 268 aa23.37■■□□□ 1.33
SUSD4-204ENST00000366878 EEA1Q15075 1411 aa23.36■■□□□ 1.33
SUSD4-204ENST00000366878 SOGA1O94964 1423 aa23.33■■□□□ 1.33
SUSD4-204ENST00000366878 TSHZ2Q9NRE2 1034 aa23.31■■□□□ 1.32
SUSD4-204ENST00000366878 NACADO15069 1562 aa23.3■■□□□ 1.32
SUSD4-204ENST00000366878 HNRNPUL2Q1KMD3 747 aaKnown RBP23.27■■□□□ 1.32
SUSD4-204ENST00000366878 CSRNP3Q8WYN3 585 aa23.25■■□□□ 1.31
SUSD4-204ENST00000366878 GOLGA3Q08378 1498 aa23.25■■□□□ 1.31
SUSD4-204ENST00000366878 BCL11AQ9H165 835 aa23.24■■□□□ 1.31
SUSD4-204ENST00000366878 UBTFP17480 764 aaKnown RBP23.23■■□□□ 1.31
SUSD4-204ENST00000366878 TOP2AP11388 1531 aaKnown RBP23.21■■□□□ 1.31
SUSD4-204ENST00000366878 RUSC2Q8N2Y8 1516 aa23.18■■□□□ 1.3
SUSD4-204ENST00000366878 SMARCA2P51531 1590 aa23.13■■□□□ 1.29
SUSD4-204ENST00000366878 VPS8Q8N3P4 1428 aa23.05■■□□□ 1.28
SUSD4-204ENST00000366878 KIF21BO75037 1637 aa23.03■■□□□ 1.28
SUSD4-204ENST00000366878 CEP164Q9UPV0 1460 aa23.02■■□□□ 1.28
SUSD4-204ENST00000366878 CLIP1P30622 1438 aa23.01■■□□□ 1.27
SUSD4-204ENST00000366878 DHX57Q6P158 1386 aaKnown RBP23■■□□□ 1.27
SUSD4-204ENST00000366878 SMARCA4P51532 1647 aa22.94■■□□□ 1.26
SUSD4-204ENST00000366878 APLP2Q06481 763 aa22.91■■□□□ 1.26
SUSD4-204ENST00000366878 BAZ1BQ9UIG0 1483 aaKnown RBP22.89■■□□□ 1.26
SUSD4-204ENST00000366878 BCANQ96GW7 911 aa22.77■■□□□ 1.24
SUSD4-204ENST00000366878 FKBP8Q14318 412 aa22.75■■□□□ 1.23
SUSD4-204ENST00000366878 KCNH8Q96L42 1107 aa22.75■■□□□ 1.23
SUSD4-204ENST00000366878 RBM19Q9Y4C8 960 aaKnown RBP22.75■■□□□ 1.23
SUSD4-204ENST00000366878 SYNJ1O43426 1573 aa22.74■■□□□ 1.23
SUSD4-204ENST00000366878 RAPGEF2Q9Y4G8 1499 aa22.73■■□□□ 1.23
SUSD4-204ENST00000366878 CUX2O14529 1486 aa22.72■■□□□ 1.23
SUSD4-204ENST00000366878 RRBP1Q9P2E9 1410 aaKnown RBP22.66■■□□□ 1.22
SUSD4-204ENST00000366878 NEFLP07196 543 aa22.6■■□□□ 1.21
SUSD4-204ENST00000366878 ARAP1Q96P48 1450 aa22.56■■□□□ 1.2
SUSD4-204ENST00000366878 KANK4Q5T7N3 995 aaPredicted RBP22.54■■□□□ 1.2
SUSD4-204ENST00000366878 MSH5O43196 834 aa22.54■■□□□ 1.2
SUSD4-204ENST00000366878 RANGAP1P46060 587 aaPredicted RBP22.52■■□□□ 1.2
SUSD4-204ENST00000366878 MAPKBP1O60336 1514 aa22.51■■□□□ 1.19
SUSD4-204ENST00000366878 ERICH3Q5RHP9 1530 aa22.49■■□□□ 1.19
SUSD4-204ENST00000366878 CCNB3Q8WWL7 1395 aa22.48■■□□□ 1.19
SUSD4-204ENST00000366878 FANCIQ9NVI1 1328 aa22.47■■□□□ 1.19
SUSD4-204ENST00000366878 DDX10Q13206 875 aaKnown RBP22.46■■□□□ 1.19
SUSD4-204ENST00000366878 PEG3Q9GZU2 1588 aa22.45■■□□□ 1.19
SUSD4-204ENST00000366878 ITGAEP38570 1179 aa22.45■■□□□ 1.18
SUSD4-204ENST00000366878 CCER2I3L3R5 266 aa22.45■■□□□ 1.18
SUSD4-204ENST00000366878 UNC13AQ9UPW8 1703 aa22.44■■□□□ 1.18
SUSD4-204ENST00000366878 PPP1R15AO75807 674 aaPredicted RBP22.44■■□□□ 1.18
SUSD4-204ENST00000366878 WDR97A6NE52 1622 aa22.42■■□□□ 1.18
SUSD4-204ENST00000366878 RAB3GAP2Q9H2M9 1393 aa22.41■■□□□ 1.18
SUSD4-204ENST00000366878 PRXQ9BXM0 1461 aa22.4■■□□□ 1.18
SUSD4-204ENST00000366878 TOP2BQ02880 1626 aa22.38■■□□□ 1.17
SUSD4-204ENST00000366878 TRIM52Q96A61 297 aa22.36■■□□□ 1.17
SUSD4-204ENST00000366878 MYT1LQ9UL68 1186 aa22.32■■□□□ 1.16
SUSD4-204ENST00000366878 ANP32CO43423 234 aa22.31■■□□□ 1.16
SUSD4-204ENST00000366878 ERICH6Q7L0X2 663 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms