RNA–Protein interactions for RNA: ENST00000328913.7

MCF2L2-201, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

APPRIS P2 TSL 5 BASIC

Gene MCF2L2, Length 4,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-201ENST00000328913 DCAF8L2P0C7V8 631 aa27.6■■■□□ 2.01
MCF2L2-201ENST00000328913 NISCHQ9Y2I1 1504 aa26.94■■□□□ 1.9
MCF2L2-201ENST00000328913 SUPT5HO00267 1087 aaKnown RBP26.15■■□□□ 1.78
MCF2L2-201ENST00000328913 SHROOM4Q9ULL8 1493 aa25.7■■□□□ 1.7
MCF2L2-201ENST00000328913 PELP1Q8IZL8 1130 aaKnown RBP25.05■■□□□ 1.6
MCF2L2-201ENST00000328913 EHMT2Q96KQ7 1210 aa25.04■■□□□ 1.6
MCF2L2-201ENST00000328913 PCGF6Q9BYE7 350 aa24.93■■□□□ 1.58
MCF2L2-201ENST00000328913 APLP2Q06481 763 aa24.62■■□□□ 1.53
MCF2L2-201ENST00000328913 FAM9AQ8IZU1 332 aaPredicted RBP24.59■■□□□ 1.53
MCF2L2-201ENST00000328913 ZEB1P37275 1124 aaPredicted RBP24.57■■□□□ 1.52
MCF2L2-201ENST00000328913 CENPBP07199 599 aaPredicted RBP24.47■■□□□ 1.51
MCF2L2-201ENST00000328913 TTBK1Q5TCY1 1321 aaPredicted RBP24.3■■□□□ 1.48
MCF2L2-201ENST00000328913 CCER1Q8TC90 406 aaPredicted RBP24.25■■□□□ 1.47
MCF2L2-201ENST00000328913 TRIM41Q8WV44 630 aa24.22■■□□□ 1.47
MCF2L2-201ENST00000328913 MYT1Q01538 1121 aa24.04■■□□□ 1.44
MCF2L2-201ENST00000328913 HRCP23327 699 aa24.02■■□□□ 1.44
MCF2L2-201ENST00000328913 RANGAP1P46060 587 aaPredicted RBP24■■□□□ 1.43
MCF2L2-201ENST00000328913 ERICH6Q7L0X2 663 aa23.93■■□□□ 1.42
MCF2L2-201ENST00000328913 TRIM26Q12899 539 aaPredicted RBP23.91■■□□□ 1.42
MCF2L2-201ENST00000328913 UBTFP17480 764 aaKnown RBP23.79■■□□□ 1.4
MCF2L2-201ENST00000328913 ATP1B4Q9UN42 357 aaPredicted RBP23.78■■□□□ 1.4
MCF2L2-201ENST00000328913 YTHDC1Q96MU7 727 aaKnown RBP23.77■■□□□ 1.4
MCF2L2-201ENST00000328913 NEFLP07196 543 aa23.68■■□□□ 1.38
MCF2L2-201ENST00000328913 CHIC1Q5VXU3 224 aa23.62■■□□□ 1.37
MCF2L2-201ENST00000328913 PPARGC1BQ86YN6 1023 aaKnown RBP23.62■■□□□ 1.37
MCF2L2-201ENST00000328913 LOC105371045A0A1W2PR82 267 aa23.52■■□□□ 1.36
MCF2L2-201ENST00000328913 ABCC9O60706 1549 aa23.36■■□□□ 1.33
MCF2L2-201ENST00000328913 PABPN1Q86U42 306 aaKnown RBP eCLIP23.19■■□□□ 1.3
MCF2L2-201ENST00000328913 DIEXFQ68CQ4 756 aaKnown RBP23.12■■□□□ 1.29
MCF2L2-201ENST00000328913 HNRNPUL2Q1KMD3 747 aaKnown RBP23.11■■□□□ 1.29
MCF2L2-201ENST00000328913 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.08■■□□□ 1.28
MCF2L2-201ENST00000328913 ITGAEP38570 1179 aa23.03■■□□□ 1.28
MCF2L2-201ENST00000328913 MYT1LQ9UL68 1186 aa22.89■■□□□ 1.25
MCF2L2-201ENST00000328913 DAXXQ9UER7 740 aaPredicted RBP22.82■■□□□ 1.24
MCF2L2-201ENST00000328913 GTF3C3Q9Y5Q9 886 aa22.82■■□□□ 1.24
MCF2L2-201ENST00000328913 POLR3GLQ9BT43 218 aa22.74■■□□□ 1.23
MCF2L2-201ENST00000328913 ACIN1Q9UKV3 1341 aaKnown RBP22.59■■□□□ 1.21
MCF2L2-201ENST00000328913 ZNF316A6NFI3 1004 aaPredicted RBP22.57■■□□□ 1.2
MCF2L2-201ENST00000328913 RTL5Q5HYW3 569 aaPredicted RBP22.57■■□□□ 1.2
MCF2L2-201ENST00000328913 CNGB1Q14028 1251 aaPredicted RBP22.56■■□□□ 1.2
MCF2L2-201ENST00000328913 BCANQ96GW7 911 aa22.46■■□□□ 1.19
MCF2L2-201ENST00000328913 FAM50AQ14320 339 aaKnown RBP22.44■■□□□ 1.18
MCF2L2-201ENST00000328913 FBLN2P98095 1184 aa22.41■■□□□ 1.18
MCF2L2-201ENST00000328913 NEUROD1Q13562 356 aa22.38■■□□□ 1.17
MCF2L2-201ENST00000328913 ANP32CO43423 234 aa22.37■■□□□ 1.17
MCF2L2-201ENST00000328913 CDK11AQ9UQ88 783 aaPredicted RBP22.32■■□□□ 1.16
MCF2L2-201ENST00000328913 SCRIBQ14160 1630 aa22.3■■□□□ 1.16
MCF2L2-201ENST00000328913 DCAF1Q9Y4B6 1507 aa22.29■■□□□ 1.16
MCF2L2-201ENST00000328913 CLSPNQ9HAW4 1339 aa22.28■■□□□ 1.16
MCF2L2-201ENST00000328913 ZCCHC6Q5VYS8 1495 aaKnown RBP22.26■■□□□ 1.15
MCF2L2-201ENST00000328913 TRIM52Q96A61 297 aa22.26■■□□□ 1.15
MCF2L2-201ENST00000328913 CSRNP3Q8WYN3 585 aa22.22■■□□□ 1.15
MCF2L2-201ENST00000328913 P3H3Q8IVL6 736 aa22.13■■□□□ 1.13
MCF2L2-201ENST00000328913 SLC4A1APQ9BWU0 796 aaKnown RBP22.13■■□□□ 1.13
MCF2L2-201ENST00000328913 CCDC180Q9P1Z9 1646 aa22.06■■□□□ 1.12
MCF2L2-201ENST00000328913 ARID3CA6NKF2 412 aa22.05■■□□□ 1.12
MCF2L2-201ENST00000328913 SCAF1Q9H7N4 1312 aaKnown RBP21.99■■□□□ 1.11
MCF2L2-201ENST00000328913 ZNF326Q5BKZ1 582 aaKnown RBP21.99■■□□□ 1.11
MCF2L2-201ENST00000328913 FKBP8Q14318 412 aa21.95■■□□□ 1.1
MCF2L2-201ENST00000328913 ANP32AP39687 249 aaKnown RBP21.93■■□□□ 1.1
MCF2L2-201ENST00000328913 ZNF777Q9ULD5 760 aaPredicted RBP21.85■■□□□ 1.09
MCF2L2-201ENST00000328913 RB1CC1Q8TDY2 1594 aa21.8■■□□□ 1.08
MCF2L2-201ENST00000328913 DDX10Q13206 875 aaKnown RBP21.78■■□□□ 1.08
MCF2L2-201ENST00000328913 HNRNPUQ00839 825 aaKnown RBP eCLIP21.76■■□□□ 1.07
MCF2L2-201ENST00000328913 TONSLQ96HA7 1378 aa21.75■■□□□ 1.07
MCF2L2-201ENST00000328913 MIER1Q8N108 512 aa21.74■■□□□ 1.07
MCF2L2-201ENST00000328913 MYO15BQ96JP2 1530 aa21.71■■□□□ 1.07
MCF2L2-201ENST00000328913 CANXP27824 592 aaKnown RBP21.71■■□□□ 1.07
MCF2L2-201ENST00000328913 NPM2Q86SE8 214 aaKnown RBP21.7■■□□□ 1.06
MCF2L2-201ENST00000328913 ZBTB47Q9UFB7 747 aaPredicted RBP21.68■■□□□ 1.06
MCF2L2-201ENST00000328913 NPM1P06748 294 aaKnown RBP eCLIP21.65■■□□□ 1.06
MCF2L2-201ENST00000328913 FAM9BQ8IZU0 186 aa21.6■■□□□ 1.05
MCF2L2-201ENST00000328913 NACADO15069 1562 aa21.6■■□□□ 1.05
MCF2L2-201ENST00000328913 CHMP7Q8WUX9 453 aaPredicted RBP21.56■■□□□ 1.04
MCF2L2-201ENST00000328913 RSF1Q96T23 1441 aaPredicted RBP21.56■■□□□ 1.04
MCF2L2-201ENST00000328913 ESF1Q9H501 851 aaKnown RBP21.54■■□□□ 1.04
MCF2L2-201ENST00000328913 CCDC136Q96JN2 1154 aa21.52■■□□□ 1.04
MCF2L2-201ENST00000328913 EIF5BO60841 1220 aaKnown RBP21.5■■□□□ 1.03
MCF2L2-201ENST00000328913 NEFMP07197 916 aa21.47■■□□□ 1.03
MCF2L2-201ENST00000328913 CLIP1P30622 1438 aa21.45■■□□□ 1.02
MCF2L2-201ENST00000328913 NBR1Q14596 966 aa21.44■■□□□ 1.02
MCF2L2-201ENST00000328913 MRS2Q9HD23 443 aa21.44■■□□□ 1.02
MCF2L2-201ENST00000328913 CHGAP10645 457 aaKnown RBP21.43■■□□□ 1.02
MCF2L2-201ENST00000328913 CHIC2Q9UKJ5 165 aa21.43■■□□□ 1.02
MCF2L2-201ENST00000328913 TMC1Q8TDI8 760 aa21.43■■□□□ 1.02
MCF2L2-201ENST00000328913 BAZ1BQ9UIG0 1483 aaKnown RBP21.42■■□□□ 1.02
MCF2L2-201ENST00000328913 BCL11AQ9H165 835 aa21.41■■□□□ 1.02
MCF2L2-201ENST00000328913 MTUS2Q5JR59 1369 aa21.4■■□□□ 1.02
MCF2L2-201ENST00000328913 UPF2Q9HAU5 1272 aaKnown RBP21.39■■□□□ 1.02
MCF2L2-201ENST00000328913 STAG3Q9UJ98 1225 aa21.39■■□□□ 1.02
MCF2L2-201ENST00000328913 TSPY4P0CV99 314 aa21.38■■□□□ 1.01
MCF2L2-201ENST00000328913 TSPY10P0CW01 314 aa21.38■■□□□ 1.01
MCF2L2-201ENST00000328913 CEP162Q5TB80 1403 aa21.37■■□□□ 1.01
MCF2L2-201ENST00000328913 IRX6P78412 446 aaPredicted RBP21.36■■□□□ 1.01
MCF2L2-201ENST00000328913 SALL2Q9Y467 1007 aaPredicted RBP21.36■■□□□ 1.01
MCF2L2-201ENST00000328913 EEA1Q15075 1411 aa21.35■■□□□ 1.01
MCF2L2-201ENST00000328913 ANP32BQ92688 251 aaKnown RBP21.35■■□□□ 1.01
MCF2L2-201ENST00000328913 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.34■■□□□ 1.01
MCF2L2-201ENST00000328913 ANP32EQ9BTT0 268 aa21.34■■□□□ 1.01
MCF2L2-201ENST00000328913 HIRIP3Q9BW71 556 aaPredicted RBP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms