RNA–Protein interactions for RNA: ENST00000337604.6

MUC1-201, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MUC1, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-201ENST00000337604 NISCHQ9Y2I1 1504 aa40.21■■■■■ 4.03
MUC1-201ENST00000337604 CCDC180Q9P1Z9 1646 aa36.08■■■■□ 3.37
MUC1-201ENST00000337604 ABCC9O60706 1549 aa35.98■■■■□ 3.35
MUC1-201ENST00000337604 RB1CC1Q8TDY2 1594 aa34.27■■■■□ 3.08
MUC1-201ENST00000337604 NACADO15069 1562 aa34.06■■■■□ 3.04
MUC1-201ENST00000337604 DCAF8L2P0C7V8 631 aa33.75■■■□□ 2.99
MUC1-201ENST00000337604 DNAJC5BQ9UF47 199 aa33.7■■■□□ 2.99
MUC1-201ENST00000337604 MYO15BQ96JP2 1530 aa33.63■■■□□ 2.97
MUC1-201ENST00000337604 UNC13AQ9UPW8 1703 aa33.58■■■□□ 2.97
MUC1-201ENST00000337604 PABPN1Q86U42 306 aaKnown RBP eCLIP33.47■■■□□ 2.95
MUC1-201ENST00000337604 ZCCHC6Q5VYS8 1495 aaKnown RBP33.39■■■□□ 2.94
MUC1-201ENST00000337604 BICRAQ9NZM4 1560 aa33.35■■■□□ 2.93
MUC1-201ENST00000337604 DCAF1Q9Y4B6 1507 aa33.23■■■□□ 2.91
MUC1-201ENST00000337604 SCRIBQ14160 1630 aa32.88■■■□□ 2.85
MUC1-201ENST00000337604 SHROOM4Q9ULL8 1493 aa32.85■■■□□ 2.85
MUC1-201ENST00000337604 CC2D2AQ9P2K1 1620 aa32.53■■■□□ 2.8
MUC1-201ENST00000337604 EIF4G1Q04637 1599 aaKnown RBP32.49■■■□□ 2.79
MUC1-201ENST00000337604 CECR2Q9BXF3 1484 aa32.4■■■□□ 2.78
MUC1-201ENST00000337604 NCAPD3P42695 1498 aa31.44■■■□□ 2.62
MUC1-201ENST00000337604 SMARCA4P51532 1647 aa31.38■■■□□ 2.61
MUC1-201ENST00000337604 ATAD2BQ9ULI0 1458 aa31.37■■■□□ 2.61
MUC1-201ENST00000337604 SMARCA2P51531 1590 aa31.26■■■□□ 2.6
MUC1-201ENST00000337604 HMGXB3Q12766 1538 aa31.25■■■□□ 2.59
MUC1-201ENST00000337604 BAZ1AQ9NRL2 1556 aaPredicted RBP31.2■■■□□ 2.58
MUC1-201ENST00000337604 PEG3Q9GZU2 1588 aa31.09■■■□□ 2.57
MUC1-201ENST00000337604 BAZ1BQ9UIG0 1483 aaKnown RBP31.05■■■□□ 2.56
MUC1-201ENST00000337604 ERCC6Q03468 1493 aa31.02■■■□□ 2.56
MUC1-201ENST00000337604 MROH2BQ7Z745 1585 aa31.02■■■□□ 2.56
MUC1-201ENST00000337604 CUX2O14529 1486 aa30.97■■■□□ 2.55
MUC1-201ENST00000337604 NESP48681 1621 aa30.97■■■□□ 2.55
MUC1-201ENST00000337604 DNAJC5Q9H3Z4 198 aa30.82■■■□□ 2.52
MUC1-201ENST00000337604 LAMC3Q9Y6N6 1575 aa30.72■■■□□ 2.51
MUC1-201ENST00000337604 THOC2Q8NI27 1593 aaKnown RBP30.67■■■□□ 2.5
MUC1-201ENST00000337604 WIZO95785 1651 aa30.65■■■□□ 2.5
MUC1-201ENST00000337604 KIF21AQ7Z4S6 1674 aa30.58■■■□□ 2.49
MUC1-201ENST00000337604 PDS5BQ9NTI5 1447 aa30.49■■■□□ 2.47
MUC1-201ENST00000337604 CADPSQ9ULU8 1353 aa30.46■■■□□ 2.47
MUC1-201ENST00000337604 RSF1Q96T23 1441 aaPredicted RBP30.38■■■□□ 2.45
MUC1-201ENST00000337604 MRC2Q9UBG0 1479 aa30.28■■■□□ 2.44
MUC1-201ENST00000337604 TOP2AP11388 1531 aaKnown RBP30.26■■■□□ 2.43
MUC1-201ENST00000337604 WDR62O43379 1518 aa30.24■■■□□ 2.43
MUC1-201ENST00000337604 CFTRP13569 1480 aa30.17■■■□□ 2.42
MUC1-201ENST00000337604 CEP164Q9UPV0 1460 aa30.17■■■□□ 2.42
MUC1-201ENST00000337604 FANCD2Q9BXW9 1451 aa30.15■■■□□ 2.42
MUC1-201ENST00000337604 URB2Q14146 1524 aaKnown RBP29.93■■■□□ 2.38
MUC1-201ENST00000337604 PRDM2Q13029 1718 aa29.91■■■□□ 2.38
MUC1-201ENST00000337604 CCDC88BA6NC98 1476 aa29.88■■■□□ 2.37
MUC1-201ENST00000337604 TOPBP1Q92547 1522 aa29.61■■■□□ 2.33
MUC1-201ENST00000337604 IFT140Q96RY7 1462 aa29.55■■■□□ 2.32
MUC1-201ENST00000337604 ZNF608Q9ULD9 1512 aaPredicted RBP29.55■■■□□ 2.32
MUC1-201ENST00000337604 DNMBPQ6XZF7 1577 aa29.5■■■□□ 2.31
MUC1-201ENST00000337604 OSCARQ8IYS5 282 aa29.48■■■□□ 2.31
MUC1-201ENST00000337604 TRIM41Q8WV44 630 aa29.47■■■□□ 2.31
MUC1-201ENST00000337604 ABCC8Q09428 1581 aa29.46■■■□□ 2.31
MUC1-201ENST00000337604 EIF4G3O43432 1585 aaKnown RBP29.4■■■□□ 2.3
MUC1-201ENST00000337604 TARBP1Q13395 1621 aaKnown RBP29.36■■■□□ 2.29
MUC1-201ENST00000337604 POLA1P09884 1462 aaPredicted RBP29.31■■■□□ 2.28
MUC1-201ENST00000337604 AQRO60306 1485 aaKnown RBP eCLIP29.25■■■□□ 2.27
MUC1-201ENST00000337604 RIMBP3CA6NJZ7 1639 aa29.21■■■□□ 2.27
MUC1-201ENST00000337604 RIMBP3BA6NNM3 1639 aa29.21■■■□□ 2.27
MUC1-201ENST00000337604 RIMBP3Q9UFD9 1639 aa29.21■■■□□ 2.27
MUC1-201ENST00000337604 RAD54L2Q9Y4B4 1467 aa29.19■■■□□ 2.26
MUC1-201ENST00000337604 CHD1O14646 1710 aa29.17■■■□□ 2.26
MUC1-201ENST00000337604 CUX1P39880 1505 aa29.14■■■□□ 2.25
MUC1-201ENST00000337604 FGD5Q6ZNL6 1462 aa29.13■■■□□ 2.25
MUC1-201ENST00000337604 ARHGEF11O15085 1522 aa29.13■■■□□ 2.25
MUC1-201ENST00000337604 SOGA1O94964 1423 aa29.11■■■□□ 2.25
MUC1-201ENST00000337604 TDRD9Q8NDG6 1382 aaKnown RBP29.06■■■□□ 2.24
MUC1-201ENST00000337604 WDR97A6NE52 1622 aa29.02■■■□□ 2.24
MUC1-201ENST00000337604 SUPT5HO00267 1087 aaKnown RBP28.98■■■□□ 2.23
MUC1-201ENST00000337604 SNAPC4Q5SXM2 1469 aa28.97■■■□□ 2.23
MUC1-201ENST00000337604 FBLN2P98095 1184 aa28.94■■■□□ 2.22
MUC1-201ENST00000337604 GRIN2BQ13224 1484 aa28.88■■■□□ 2.21
MUC1-201ENST00000337604 MAGI1Q96QZ7 1491 aaPredicted RBP28.88■■■□□ 2.21
MUC1-201ENST00000337604 ARAP1Q96P48 1450 aa28.86■■■□□ 2.21
MUC1-201ENST00000337604 CLASP1Q7Z460 1538 aa28.84■■■□□ 2.21
MUC1-201ENST00000337604 PBRM1Q86U86 1689 aa28.82■■■□□ 2.2
MUC1-201ENST00000337604 ABCA10Q8WWZ4 1543 aa28.8■■■□□ 2.2
MUC1-201ENST00000337604 CYB5RLQ6IPT4 315 aa28.8■■■□□ 2.2
MUC1-201ENST00000337604 ABCA5Q8WWZ7 1642 aa28.8■■■□□ 2.2
MUC1-201ENST00000337604 SYNJ2O15056 1496 aa28.78■■■□□ 2.2
MUC1-201ENST00000337604 GAPVD1Q14C86 1478 aa28.78■■■□□ 2.2
MUC1-201ENST00000337604 SYNJ1O43426 1573 aa28.77■■■□□ 2.2
MUC1-201ENST00000337604 CHMP7Q8WUX9 453 aaPredicted RBP28.75■■■□□ 2.19
MUC1-201ENST00000337604 BIVM-ERCC5R4GMW8 1640 aa28.69■■■□□ 2.18
MUC1-201ENST00000337604 TOP2BQ02880 1626 aa28.68■■■□□ 2.18
MUC1-201ENST00000337604 WRNQ14191 1432 aaPredicted RBP eCLIP28.65■■■□□ 2.18
MUC1-201ENST00000337604 ADAMTS12P58397 1594 aa28.57■■■□□ 2.16
MUC1-201ENST00000337604 GRIN2AQ12879 1464 aa28.53■■■□□ 2.16
MUC1-201ENST00000337604 CEP170Q5SW79 1584 aa28.47■■■□□ 2.15
MUC1-201ENST00000337604 NUP160Q12769 1436 aa28.45■■■□□ 2.15
MUC1-201ENST00000337604 ERICH3Q5RHP9 1530 aa28.43■■■□□ 2.14
MUC1-201ENST00000337604 FHAD1B1AJZ9 1412 aa28.42■■■□□ 2.14
MUC1-201ENST00000337604 ERCC6L2Q5T890 1561 aa28.41■■■□□ 2.14
MUC1-201ENST00000337604 TRHP20396 242 aaPredicted RBP28.41■■■□□ 2.14
MUC1-201ENST00000337604 SHROOM2Q13796 1616 aa28.34■■■□□ 2.13
MUC1-201ENST00000337604 RUSC2Q8N2Y8 1516 aa28.18■■■□□ 2.1
MUC1-201ENST00000337604 PRG4Q92954 1404 aaPredicted RBP28.12■■■□□ 2.09
MUC1-201ENST00000337604 JPH4Q96JJ6 628 aa28.06■■■□□ 2.08
MUC1-201ENST00000337604 IGF1RP08069 1367 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms