Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC13.43□□□□□ -0.26
CSMD1Q96PZ7 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC13.43□□□□□ -0.26
CSMD1Q96PZ7 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CSMD1Q96PZ7 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CSMD1Q96PZ7 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CSMD1Q96PZ7 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CSMD1Q96PZ7 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC13.43□□□□□ -0.26
CSMD1Q96PZ7 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.43□□□□□ -0.26
CSMD1Q96PZ7 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CSMD1Q96PZ7 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CSMD1Q96PZ7 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC13.43□□□□□ -0.26
CSMD1Q96PZ7 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.43□□□□□ -0.26
CSMD1Q96PZ7 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC13.43□□□□□ -0.26
CSMD1Q96PZ7 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.43□□□□□ -0.26
CSMD1Q96PZ7 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.43□□□□□ -0.26
CSMD1Q96PZ7 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CSMD1Q96PZ7 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CSMD1Q96PZ7 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CSMD1Q96PZ7 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
CSMD1Q96PZ7 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC13.43□□□□□ -0.26
CSMD1Q96PZ7 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CSMD1Q96PZ7 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CSMD1Q96PZ7 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CSMD1Q96PZ7 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
CSMD1Q96PZ7 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CSMD1Q96PZ7 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC13.43□□□□□ -0.26
CSMD1Q96PZ7 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CSMD1Q96PZ7 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC13.43□□□□□ -0.26
CSMD1Q96PZ7 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC13.43□□□□□ -0.26
CSMD1Q96PZ7 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.43□□□□□ -0.26
CSMD1Q96PZ7 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CSMD1Q96PZ7 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC13.43□□□□□ -0.26
CSMD1Q96PZ7 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CSMD1Q96PZ7 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC13.43□□□□□ -0.26
CSMD1Q96PZ7 CDK7-214ENST00000626796 358 ntTSL 5 BASIC13.43□□□□□ -0.26
CSMD1Q96PZ7 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC13.43□□□□□ -0.26
CSMD1Q96PZ7 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
CSMD1Q96PZ7 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.43□□□□□ -0.26
CSMD1Q96PZ7 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CSMD1Q96PZ7 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CSMD1Q96PZ7 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
CSMD1Q96PZ7 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CSMD1Q96PZ7 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CSMD1Q96PZ7 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC13.42□□□□□ -0.26
CSMD1Q96PZ7 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CSMD1Q96PZ7 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CSMD1Q96PZ7 RPL13AP25-201ENST00000484130 612 ntBASIC13.42□□□□□ -0.26
CSMD1Q96PZ7 AC022137.2-201ENST00000503482 481 ntBASIC13.42□□□□□ -0.26
CSMD1Q96PZ7 AP001063.1-201ENST00000568332 529 ntBASIC13.42□□□□□ -0.26
CSMD1Q96PZ7 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC13.42□□□□□ -0.26
CSMD1Q96PZ7 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CSMD1Q96PZ7 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CSMD1Q96PZ7 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CSMD1Q96PZ7 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CSMD1Q96PZ7 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC13.42□□□□□ -0.26
CSMD1Q96PZ7 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CSMD1Q96PZ7 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC13.42□□□□□ -0.26
CSMD1Q96PZ7 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CSMD1Q96PZ7 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CSMD1Q96PZ7 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CSMD1Q96PZ7 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CSMD1Q96PZ7 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
CSMD1Q96PZ7 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CSMD1Q96PZ7 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
CSMD1Q96PZ7 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CSMD1Q96PZ7 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CSMD1Q96PZ7 AC024681.1-201ENST00000521917 487 ntBASIC13.42□□□□□ -0.26
CSMD1Q96PZ7 WT1-AS_6.1-201ENST00000614919 121 ntBASIC13.42□□□□□ -0.26
CSMD1Q96PZ7 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CSMD1Q96PZ7 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CSMD1Q96PZ7 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC13.42□□□□□ -0.26
CSMD1Q96PZ7 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CSMD1Q96PZ7 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CSMD1Q96PZ7 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CSMD1Q96PZ7 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CSMD1Q96PZ7 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
CSMD1Q96PZ7 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CSMD1Q96PZ7 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CSMD1Q96PZ7 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.42□□□□□ -0.26
CSMD1Q96PZ7 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC13.42□□□□□ -0.26
CSMD1Q96PZ7 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.42□□□□□ -0.26
CSMD1Q96PZ7 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CSMD1Q96PZ7 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC13.42□□□□□ -0.26
CSMD1Q96PZ7 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CSMD1Q96PZ7 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CSMD1Q96PZ7 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
CSMD1Q96PZ7 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CSMD1Q96PZ7 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CSMD1Q96PZ7 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CSMD1Q96PZ7 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CSMD1Q96PZ7 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC13.42□□□□□ -0.26
CSMD1Q96PZ7 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CSMD1Q96PZ7 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC13.42□□□□□ -0.26
CSMD1Q96PZ7 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
CSMD1Q96PZ7 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CSMD1Q96PZ7 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
CSMD1Q96PZ7 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
CSMD1Q96PZ7 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CSMD1Q96PZ7 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CSMD1Q96PZ7 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms