RNA–Protein interactions for RNA: ENST00000563673.5

FANCA-213, Transcript of FA complementation group A, humanhuman

TSL 1 (best) BASIC

Gene FANCA, Length 1,694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-213ENST00000563673 NISCHQ9Y2I1 1504 aa36.47■■■■□ 3.43
FANCA-213ENST00000563673 CCDC180Q9P1Z9 1646 aa32.4■■■□□ 2.78
FANCA-213ENST00000563673 ABCC9O60706 1549 aa31.86■■■□□ 2.69
FANCA-213ENST00000563673 DCAF8L2P0C7V8 631 aa30.58■■■□□ 2.49
FANCA-213ENST00000563673 RB1CC1Q8TDY2 1594 aa30.58■■■□□ 2.49
FANCA-213ENST00000563673 NACADO15069 1562 aa30.53■■■□□ 2.48
FANCA-213ENST00000563673 ZCCHC6Q5VYS8 1495 aaKnown RBP30.36■■■□□ 2.45
FANCA-213ENST00000563673 MYO15BQ96JP2 1530 aa30.32■■■□□ 2.45
FANCA-213ENST00000563673 DCAF1Q9Y4B6 1507 aa30.16■■■□□ 2.42
FANCA-213ENST00000563673 UNC13AQ9UPW8 1703 aa29.81■■■□□ 2.36
FANCA-213ENST00000563673 PABPN1Q86U42 306 aaKnown RBP eCLIP29.79■■■□□ 2.362e-8■□□□□ 10
FANCA-213ENST00000563673 BICRAQ9NZM4 1560 aa29.65■■■□□ 2.34
FANCA-213ENST00000563673 SCRIBQ14160 1630 aa29.59■■■□□ 2.33
FANCA-213ENST00000563673 DNAJC5BQ9UF47 199 aa29.34■■■□□ 2.29
FANCA-213ENST00000563673 SHROOM4Q9ULL8 1493 aa29.34■■■□□ 2.29
FANCA-213ENST00000563673 EIF4G1Q04637 1599 aaKnown RBP28.89■■■□□ 2.21
FANCA-213ENST00000563673 CC2D2AQ9P2K1 1620 aa28.78■■■□□ 2.2
FANCA-213ENST00000563673 CECR2Q9BXF3 1484 aa28.64■■■□□ 2.17
FANCA-213ENST00000563673 SMARCA4P51532 1647 aa28.29■■■□□ 2.12
FANCA-213ENST00000563673 BAZ1AQ9NRL2 1556 aaPredicted RBP28.27■■■□□ 2.12
FANCA-213ENST00000563673 NCAPD3P42695 1498 aa28.19■■■□□ 2.1
FANCA-213ENST00000563673 ATAD2BQ9ULI0 1458 aa28.19■■■□□ 2.1
FANCA-213ENST00000563673 SMARCA2P51531 1590 aa28.14■■■□□ 2.09
FANCA-213ENST00000563673 MROH2BQ7Z745 1585 aa28.11■■■□□ 2.09
FANCA-213ENST00000563673 PEG3Q9GZU2 1588 aa28.03■■■□□ 2.08
FANCA-213ENST00000563673 HMGXB3Q12766 1538 aa28.02■■■□□ 2.08
FANCA-213ENST00000563673 BAZ1BQ9UIG0 1483 aaKnown RBP27.96■■■□□ 2.07
FANCA-213ENST00000563673 RSF1Q96T23 1441 aaPredicted RBP27.78■■■□□ 2.04
FANCA-213ENST00000563673 WIZO95785 1651 aa27.78■■■□□ 2.04
FANCA-213ENST00000563673 NESP48681 1621 aa27.53■■■□□ 2
FANCA-213ENST00000563673 TOP2AP11388 1531 aaKnown RBP27.49■■□□□ 1.99
FANCA-213ENST00000563673 ERCC6Q03468 1493 aa27.47■■□□□ 1.99
FANCA-213ENST00000563673 LAMC3Q9Y6N6 1575 aa27.43■■□□□ 1.98
FANCA-213ENST00000563673 CADPSQ9ULU8 1353 aa27.39■■□□□ 1.97
FANCA-213ENST00000563673 PDS5BQ9NTI5 1447 aa27.29■■□□□ 1.96
FANCA-213ENST00000563673 CCDC88BA6NC98 1476 aa27.19■■□□□ 1.94
FANCA-213ENST00000563673 CUX2O14529 1486 aa27.19■■□□□ 1.94
FANCA-213ENST00000563673 CFTRP13569 1480 aa27.19■■□□□ 1.94
FANCA-213ENST00000563673 KIF21AQ7Z4S6 1674 aa27.15■■□□□ 1.94
FANCA-213ENST00000563673 THOC2Q8NI27 1593 aaKnown RBP27.1■■□□□ 1.93
FANCA-213ENST00000563673 FANCD2Q9BXW9 1451 aa27.06■■□□□ 1.92
FANCA-213ENST00000563673 SUPT5HO00267 1087 aaKnown RBP27.05■■□□□ 1.92
FANCA-213ENST00000563673 CEP164Q9UPV0 1460 aa27.02■■□□□ 1.92
FANCA-213ENST00000563673 MRC2Q9UBG0 1479 aa27■■□□□ 1.91
FANCA-213ENST00000563673 WDR62O43379 1518 aa26.9■■□□□ 1.9
FANCA-213ENST00000563673 PRDM2Q13029 1718 aa26.87■■□□□ 1.89
FANCA-213ENST00000563673 URB2Q14146 1524 aaKnown RBP26.78■■□□□ 1.88
FANCA-213ENST00000563673 TOPBP1Q92547 1522 aa26.6■■□□□ 1.85
FANCA-213ENST00000563673 ABCC8Q09428 1581 aa26.6■■□□□ 1.85
FANCA-213ENST00000563673 DNMBPQ6XZF7 1577 aa26.55■■□□□ 1.84
FANCA-213ENST00000563673 DNAJC5Q9H3Z4 198 aa26.49■■□□□ 1.83
FANCA-213ENST00000563673 IFT140Q96RY7 1462 aa26.46■■□□□ 1.83
FANCA-213ENST00000563673 POLA1P09884 1462 aaPredicted RBP26.38■■□□□ 1.81
FANCA-213ENST00000563673 CUX1P39880 1505 aa26.37■■□□□ 1.81
FANCA-213ENST00000563673 ZNF608Q9ULD9 1512 aaPredicted RBP26.35■■□□□ 1.81
FANCA-213ENST00000563673 FGD5Q6ZNL6 1462 aa26.3■■□□□ 1.8
FANCA-213ENST00000563673 TARBP1Q13395 1621 aaKnown RBP26.29■■□□□ 1.8
FANCA-213ENST00000563673 SOGA1O94964 1423 aa26.29■■□□□ 1.8
FANCA-213ENST00000563673 RAD54L2Q9Y4B4 1467 aa26.28■■□□□ 1.8
FANCA-213ENST00000563673 AQRO60306 1485 aaKnown RBP eCLIP26.21■■□□□ 1.795e-10■■■□□ 18.1
FANCA-213ENST00000563673 EIF4G3O43432 1585 aaKnown RBP26.21■■□□□ 1.79
FANCA-213ENST00000563673 WRNQ14191 1432 aaPredicted RBP eCLIP26.19■■□□□ 1.78
FANCA-213ENST00000563673 TDRD9Q8NDG6 1382 aaKnown RBP26.17■■□□□ 1.78
FANCA-213ENST00000563673 TOP2BQ02880 1626 aa26.11■■□□□ 1.77
FANCA-213ENST00000563673 OSCARQ8IYS5 282 aa26.1■■□□□ 1.77
FANCA-213ENST00000563673 SYNJ1O43426 1573 aa26.1■■□□□ 1.77
FANCA-213ENST00000563673 BIVM-ERCC5R4GMW8 1640 aa26.08■■□□□ 1.77
FANCA-213ENST00000563673 WDR97A6NE52 1622 aa26.08■■□□□ 1.76
FANCA-213ENST00000563673 ABCA10Q8WWZ4 1543 aa26.04■■□□□ 1.76
FANCA-213ENST00000563673 GRIN2BQ13224 1484 aa25.98■■□□□ 1.75
FANCA-213ENST00000563673 GAPVD1Q14C86 1478 aa25.97■■□□□ 1.75
FANCA-213ENST00000563673 SNAPC4Q5SXM2 1469 aa25.95■■□□□ 1.74
FANCA-213ENST00000563673 FBLN2P98095 1184 aa25.95■■□□□ 1.74
FANCA-213ENST00000563673 MAGI1Q96QZ7 1491 aaPredicted RBP25.91■■□□□ 1.74
FANCA-213ENST00000563673 ABCA5Q8WWZ7 1642 aa25.91■■□□□ 1.74
FANCA-213ENST00000563673 CHD1O14646 1710 aa25.86■■□□□ 1.73
FANCA-213ENST00000563673 CHMP7Q8WUX9 453 aaPredicted RBP25.86■■□□□ 1.73
FANCA-213ENST00000563673 PBRM1Q86U86 1689 aa25.85■■□□□ 1.73
FANCA-213ENST00000563673 SYNJ2O15056 1496 aa25.82■■□□□ 1.72
FANCA-213ENST00000563673 ERICH3Q5RHP9 1530 aa25.72■■□□□ 1.71
FANCA-213ENST00000563673 ADAMTS12P58397 1594 aa25.67■■□□□ 1.7
FANCA-213ENST00000563673 FHAD1B1AJZ9 1412 aa25.67■■□□□ 1.7
FANCA-213ENST00000563673 KIF27Q86VH2 1401 aa25.66■■□□□ 1.7
FANCA-213ENST00000563673 GRIN2AQ12879 1464 aa25.64■■□□□ 1.69
FANCA-213ENST00000563673 ARHGEF11O15085 1522 aa25.63■■□□□ 1.69
FANCA-213ENST00000563673 CLASP1Q7Z460 1538 aa25.62■■□□□ 1.69
FANCA-213ENST00000563673 RIMBP3CA6NJZ7 1639 aa25.62■■□□□ 1.69
FANCA-213ENST00000563673 RIMBP3BA6NNM3 1639 aa25.62■■□□□ 1.69
FANCA-213ENST00000563673 RIMBP3Q9UFD9 1639 aa25.62■■□□□ 1.69
FANCA-213ENST00000563673 TRIM41Q8WV44 630 aa25.6■■□□□ 1.69
FANCA-213ENST00000563673 IGF1RP08069 1367 aa25.58■■□□□ 1.69
FANCA-213ENST00000563673 NUP160Q12769 1436 aa25.53■■□□□ 1.68
FANCA-213ENST00000563673 CEP170Q5SW79 1584 aa25.49■■□□□ 1.67
FANCA-213ENST00000563673 CYB5RLQ6IPT4 315 aa25.45■■□□□ 1.66
FANCA-213ENST00000563673 CUL7Q14999 1698 aa25.44■■□□□ 1.66
FANCA-213ENST00000563673 ARAP1Q96P48 1450 aa25.42■■□□□ 1.66
FANCA-213ENST00000563673 CARMIL1Q5VZK9 1371 aa25.42■■□□□ 1.66
FANCA-213ENST00000563673 RUSC2Q8N2Y8 1516 aa25.39■■□□□ 1.66
FANCA-213ENST00000563673 SHROOM2Q13796 1616 aa25.31■■□□□ 1.64
FANCA-213ENST00000563673 JPH4Q96JJ6 628 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms