RNA–Protein interactions for RNA: ENST00000452622.1

HRAT92-201, humanhuman

TSL 2 BASIC

Gene HRAT92, Length 3,506 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HRAT92-201ENST00000452622 NISCHQ9Y2I1 1504 aa33.81■■■■□ 3
HRAT92-201ENST00000452622 SHROOM4Q9ULL8 1493 aa29.77■■■□□ 2.36
HRAT92-201ENST00000452622 SUPT5HO00267 1087 aaKnown RBP29.53■■■□□ 2.32
HRAT92-201ENST00000452622 HRCP23327 699 aa28.99■■■□□ 2.23
HRAT92-201ENST00000452622 CHIC1Q5VXU3 224 aa28.79■■■□□ 2.2
HRAT92-201ENST00000452622 MYO15BQ96JP2 1530 aa28.75■■■□□ 2.19
HRAT92-201ENST00000452622 PCGF6Q9BYE7 350 aa28.73■■■□□ 2.19
HRAT92-201ENST00000452622 ZCCHC6Q5VYS8 1495 aaKnown RBP28.67■■■□□ 2.18
HRAT92-201ENST00000452622 DCAF8L2P0C7V8 631 aa28.51■■■□□ 2.16
HRAT92-201ENST00000452622 PPARGC1BQ86YN6 1023 aaKnown RBP28.45■■■□□ 2.15
HRAT92-201ENST00000452622 CCDC180Q9P1Z9 1646 aa28.2■■■□□ 2.1
HRAT92-201ENST00000452622 LOC105371045A0A1W2PR82 267 aa28.13■■■□□ 2.09
HRAT92-201ENST00000452622 DCAF1Q9Y4B6 1507 aa28.05■■■□□ 2.08
HRAT92-201ENST00000452622 TRIM26Q12899 539 aaPredicted RBP27.87■■■□□ 2.05
HRAT92-201ENST00000452622 ZEB1P37275 1124 aaPredicted RBP27.51■■□□□ 1.99
HRAT92-201ENST00000452622 TRIM41Q8WV44 630 aa27.35■■□□□ 1.97
HRAT92-201ENST00000452622 FAM9AQ8IZU1 332 aaPredicted RBP27.34■■□□□ 1.97
HRAT92-201ENST00000452622 PELP1Q8IZL8 1130 aaKnown RBP27.29■■□□□ 1.96
HRAT92-201ENST00000452622 EHMT2Q96KQ7 1210 aa27.25■■□□□ 1.95
HRAT92-201ENST00000452622 SCAF1Q9H7N4 1312 aaKnown RBP27.16■■□□□ 1.94
HRAT92-201ENST00000452622 ABCC9O60706 1549 aa27.14■■□□□ 1.94
HRAT92-201ENST00000452622 RSF1Q96T23 1441 aaPredicted RBP27.09■■□□□ 1.93
HRAT92-201ENST00000452622 SCRIBQ14160 1630 aa26.9■■□□□ 1.9
HRAT92-201ENST00000452622 RB1CC1Q8TDY2 1594 aa26.88■■□□□ 1.89
HRAT92-201ENST00000452622 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.78■■□□□ 1.88
HRAT92-201ENST00000452622 CCER1Q8TC90 406 aaPredicted RBP26.77■■□□□ 1.88
HRAT92-201ENST00000452622 ACIN1Q9UKV3 1341 aaKnown RBP26.67■■□□□ 1.86
HRAT92-201ENST00000452622 NEUROD1Q13562 356 aa26.62■■□□□ 1.85
HRAT92-201ENST00000452622 DIEXFQ68CQ4 756 aaKnown RBP26.53■■□□□ 1.84
HRAT92-201ENST00000452622 TTBK1Q5TCY1 1321 aaPredicted RBP26.51■■□□□ 1.83
HRAT92-201ENST00000452622 CENPBP07199 599 aaPredicted RBP26.49■■□□□ 1.83
HRAT92-201ENST00000452622 CECR2Q9BXF3 1484 aa26.48■■□□□ 1.83
HRAT92-201ENST00000452622 GTF3C3Q9Y5Q9 886 aa26.48■■□□□ 1.83
HRAT92-201ENST00000452622 MROH2BQ7Z745 1585 aa26.39■■□□□ 1.82
HRAT92-201ENST00000452622 WIZO95785 1651 aa26.26■■□□□ 1.79
HRAT92-201ENST00000452622 YTHDC1Q96MU7 727 aaKnown RBP26.12■■□□□ 1.77
HRAT92-201ENST00000452622 ZNF316A6NFI3 1004 aaPredicted RBP26.1■■□□□ 1.77
HRAT92-201ENST00000452622 CEP162Q5TB80 1403 aa26.09■■□□□ 1.77
HRAT92-201ENST00000452622 MYT1Q01538 1121 aa26.09■■□□□ 1.77
HRAT92-201ENST00000452622 WRNQ14191 1432 aaPredicted RBP eCLIP26.07■■□□□ 1.761e-7■■■■■ 66.8
HRAT92-201ENST00000452622 NACADO15069 1562 aa26.07■■□□□ 1.76
HRAT92-201ENST00000452622 UBTFP17480 764 aaKnown RBP26.05■■□□□ 1.76
HRAT92-201ENST00000452622 CCDC88BA6NC98 1476 aa26.03■■□□□ 1.76
HRAT92-201ENST00000452622 BAZ1AQ9NRL2 1556 aaPredicted RBP26.02■■□□□ 1.76
HRAT92-201ENST00000452622 ABCC8Q09428 1581 aa26.01■■□□□ 1.75
HRAT92-201ENST00000452622 EIF4G1Q04637 1599 aaKnown RBP25.96■■□□□ 1.75
HRAT92-201ENST00000452622 TNIKQ9UKE5 1360 aa25.94■■□□□ 1.74
HRAT92-201ENST00000452622 SOGA1O94964 1423 aa25.94■■□□□ 1.74
HRAT92-201ENST00000452622 CSRNP3Q8WYN3 585 aa25.91■■□□□ 1.74
HRAT92-201ENST00000452622 HNRNPUL2Q1KMD3 747 aaKnown RBP25.87■■□□□ 1.73
HRAT92-201ENST00000452622 MIER1Q8N108 512 aa25.86■■□□□ 1.73
HRAT92-201ENST00000452622 TOP2AP11388 1531 aaKnown RBP25.77■■□□□ 1.72
HRAT92-201ENST00000452622 RUSC2Q8N2Y8 1516 aa25.76■■□□□ 1.71
HRAT92-201ENST00000452622 EEA1Q15075 1411 aa25.74■■□□□ 1.71
HRAT92-201ENST00000452622 GOLGA3Q08378 1498 aa25.68■■□□□ 1.7
HRAT92-201ENST00000452622 SMARCA2P51531 1590 aa25.67■■□□□ 1.7
HRAT92-201ENST00000452622 APLP2Q06481 763 aa25.61■■□□□ 1.69
HRAT92-201ENST00000452622 SMARCA4P51532 1647 aa25.58■■□□□ 1.69
HRAT92-201ENST00000452622 RANGAP1P46060 587 aaPredicted RBP25.56■■□□□ 1.68
HRAT92-201ENST00000452622 CLIP1P30622 1438 aa25.5■■□□□ 1.67
HRAT92-201ENST00000452622 CEP164Q9UPV0 1460 aa25.45■■□□□ 1.67
HRAT92-201ENST00000452622 VPS8Q8N3P4 1428 aa25.4■■□□□ 1.66
HRAT92-201ENST00000452622 SUPT16HQ9Y5B9 1047 aaKnown RBP25.27■■□□□ 1.64
HRAT92-201ENST00000452622 KIF21BO75037 1637 aa25.27■■□□□ 1.64
HRAT92-201ENST00000452622 PABPN1Q86U42 306 aaKnown RBP eCLIP25.26■■□□□ 1.64
HRAT92-201ENST00000452622 RAPGEF2Q9Y4G8 1499 aa25.23■■□□□ 1.63
HRAT92-201ENST00000452622 SYNJ1O43426 1573 aa25.23■■□□□ 1.63
HRAT92-201ENST00000452622 CLSPNQ9HAW4 1339 aa25.23■■□□□ 1.63
HRAT92-201ENST00000452622 DHX57Q6P158 1386 aaKnown RBP25.19■■□□□ 1.62
HRAT92-201ENST00000452622 BAZ1BQ9UIG0 1483 aaKnown RBP25.17■■□□□ 1.62
HRAT92-201ENST00000452622 UNC13AQ9UPW8 1703 aa25.15■■□□□ 1.62
HRAT92-201ENST00000452622 KANK4Q5T7N3 995 aaPredicted RBP25.06■■□□□ 1.6
HRAT92-201ENST00000452622 ITGAEP38570 1179 aa25.02■■□□□ 1.6
HRAT92-201ENST00000452622 TSHZ2Q9NRE2 1034 aa25.02■■□□□ 1.6
HRAT92-201ENST00000452622 KCNH8Q96L42 1107 aa24.92■■□□□ 1.58
HRAT92-201ENST00000452622 BCANQ96GW7 911 aa24.92■■□□□ 1.58
HRAT92-201ENST00000452622 PEG3Q9GZU2 1588 aa24.9■■□□□ 1.58
HRAT92-201ENST00000452622 ARAP1Q96P48 1450 aa24.89■■□□□ 1.58
HRAT92-201ENST00000452622 ANP32EQ9BTT0 268 aa24.87■■□□□ 1.57
HRAT92-201ENST00000452622 ATAD2BQ9ULI0 1458 aa24.87■■□□□ 1.57
HRAT92-201ENST00000452622 CCNB3Q8WWL7 1395 aa24.84■■□□□ 1.57
HRAT92-201ENST00000452622 RRBP1Q9P2E9 1410 aaKnown RBP24.84■■□□□ 1.57
HRAT92-201ENST00000452622 BICRAQ9NZM4 1560 aa24.82■■□□□ 1.56
HRAT92-201ENST00000452622 PRXQ9BXM0 1461 aa24.79■■□□□ 1.56
HRAT92-201ENST00000452622 FKBP8Q14318 412 aa24.79■■□□□ 1.56
HRAT92-201ENST00000452622 TOP2BQ02880 1626 aa24.79■■□□□ 1.56
HRAT92-201ENST00000452622 ERICH3Q5RHP9 1530 aa24.77■■□□□ 1.56
HRAT92-201ENST00000452622 DDX10Q13206 875 aaKnown RBP24.76■■□□□ 1.55
HRAT92-201ENST00000452622 RAB3GAP2Q9H2M9 1393 aa24.72■■□□□ 1.55
HRAT92-201ENST00000452622 CUX2O14529 1486 aa24.7■■□□□ 1.54
HRAT92-201ENST00000452622 NEFLP07196 543 aa24.68■■□□□ 1.54
HRAT92-201ENST00000452622 KIF27Q86VH2 1401 aa24.64■■□□□ 1.54
HRAT92-201ENST00000452622 SIN3AQ96ST3 1273 aa24.64■■□□□ 1.53
HRAT92-201ENST00000452622 ARHGAP35Q9NRY4 1499 aa24.6■■□□□ 1.53
HRAT92-201ENST00000452622 BIVM-ERCC5R4GMW8 1640 aa24.6■■□□□ 1.53
HRAT92-201ENST00000452622 FAM50AQ14320 339 aaKnown RBP24.59■■□□□ 1.53
HRAT92-201ENST00000452622 HIRIP3Q9BW71 556 aaPredicted RBP24.59■■□□□ 1.53
HRAT92-201ENST00000452622 TRIM52Q96A61 297 aa24.58■■□□□ 1.53
HRAT92-201ENST00000452622 MAPKBP1O60336 1514 aa24.57■■□□□ 1.52
HRAT92-201ENST00000452622 SETD5Q9C0A6 1442 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms