RNA–Protein interactions for RNA: ENST00000425630.1

LINC00200-201, long intergenic non-protein coding RNA 200, humanhuman

TSL 1 (best) BASIC

Gene LINC00200, Length 2,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00200-201ENST00000425630 NISCHQ9Y2I1 1504 aa33.9■■■■□ 3.02
LINC00200-201ENST00000425630 SHROOM4Q9ULL8 1493 aa29.5■■■□□ 2.31
LINC00200-201ENST00000425630 SUPT5HO00267 1087 aaKnown RBP29.11■■■□□ 2.25
LINC00200-201ENST00000425630 ZCCHC6Q5VYS8 1495 aaKnown RBP28.75■■■□□ 2.19
LINC00200-201ENST00000425630 MYO15BQ96JP2 1530 aa28.5■■■□□ 2.15
LINC00200-201ENST00000425630 CHIC1Q5VXU3 224 aa28.45■■■□□ 2.14
LINC00200-201ENST00000425630 CCDC180Q9P1Z9 1646 aa28.43■■■□□ 2.14
LINC00200-201ENST00000425630 HRCP23327 699 aa28.31■■■□□ 2.12
LINC00200-201ENST00000425630 DCAF8L2P0C7V8 631 aa28.25■■■□□ 2.11
LINC00200-201ENST00000425630 PCGF6Q9BYE7 350 aa28.08■■■□□ 2.09
LINC00200-201ENST00000425630 PPARGC1BQ86YN6 1023 aaKnown RBP27.82■■■□□ 2.04
LINC00200-201ENST00000425630 LOC105371045A0A1W2PR82 267 aa27.74■■■□□ 2.03
LINC00200-201ENST00000425630 DCAF1Q9Y4B6 1507 aa27.68■■■□□ 2.02
LINC00200-201ENST00000425630 TRIM26Q12899 539 aaPredicted RBP27.32■■□□□ 1.96
LINC00200-201ENST00000425630 ABCC9O60706 1549 aa27.19■■□□□ 1.94
LINC00200-201ENST00000425630 RSF1Q96T23 1441 aaPredicted RBP27.08■■□□□ 1.93
LINC00200-201ENST00000425630 TRIM41Q8WV44 630 aa26.99■■□□□ 1.91
LINC00200-201ENST00000425630 SCRIBQ14160 1630 aa26.96■■□□□ 1.91
LINC00200-201ENST00000425630 FAM9AQ8IZU1 332 aaPredicted RBP26.92■■□□□ 1.9
LINC00200-201ENST00000425630 RB1CC1Q8TDY2 1594 aa26.86■■□□□ 1.89
LINC00200-201ENST00000425630 ZEB1P37275 1124 aaPredicted RBP26.82■■□□□ 1.88
LINC00200-201ENST00000425630 EHMT2Q96KQ7 1210 aa26.79■■□□□ 1.88
LINC00200-201ENST00000425630 CECR2Q9BXF3 1484 aa26.56■■□□□ 1.84
LINC00200-201ENST00000425630 MROH2BQ7Z745 1585 aa26.46■■□□□ 1.83
LINC00200-201ENST00000425630 SCAF1Q9H7N4 1312 aaKnown RBP26.44■■□□□ 1.82
LINC00200-201ENST00000425630 WIZO95785 1651 aa26.32■■□□□ 1.8
LINC00200-201ENST00000425630 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.28■■□□□ 1.8
LINC00200-201ENST00000425630 NACADO15069 1562 aa26.25■■□□□ 1.79
LINC00200-201ENST00000425630 PELP1Q8IZL8 1130 aaKnown RBP26.17■■□□□ 1.78
LINC00200-201ENST00000425630 CCER1Q8TC90 406 aaPredicted RBP26.16■■□□□ 1.78
LINC00200-201ENST00000425630 EIF4G1Q04637 1599 aaKnown RBP26.09■■□□□ 1.77
LINC00200-201ENST00000425630 BAZ1AQ9NRL2 1556 aaPredicted RBP26.09■■□□□ 1.77
LINC00200-201ENST00000425630 TTBK1Q5TCY1 1321 aaPredicted RBP26.02■■□□□ 1.76
LINC00200-201ENST00000425630 NEUROD1Q13562 356 aa25.97■■□□□ 1.75
LINC00200-201ENST00000425630 ACIN1Q9UKV3 1341 aaKnown RBP25.96■■□□□ 1.75
LINC00200-201ENST00000425630 ABCC8Q09428 1581 aa25.95■■□□□ 1.75
LINC00200-201ENST00000425630 CCDC88BA6NC98 1476 aa25.95■■□□□ 1.74
LINC00200-201ENST00000425630 DIEXFQ68CQ4 756 aaKnown RBP25.89■■□□□ 1.73
LINC00200-201ENST00000425630 WRNQ14191 1432 aaPredicted RBP eCLIP25.87■■□□□ 1.73
LINC00200-201ENST00000425630 CEP162Q5TB80 1403 aa25.85■■□□□ 1.73
LINC00200-201ENST00000425630 SOGA1O94964 1423 aa25.83■■□□□ 1.73
LINC00200-201ENST00000425630 TOP2AP11388 1531 aaKnown RBP25.82■■□□□ 1.72
LINC00200-201ENST00000425630 SMARCA2P51531 1590 aa25.74■■□□□ 1.71
LINC00200-201ENST00000425630 TNIKQ9UKE5 1360 aa25.74■■□□□ 1.71
LINC00200-201ENST00000425630 GTF3C3Q9Y5Q9 886 aa25.73■■□□□ 1.71
LINC00200-201ENST00000425630 RUSC2Q8N2Y8 1516 aa25.71■■□□□ 1.71
LINC00200-201ENST00000425630 SMARCA4P51532 1647 aa25.7■■□□□ 1.7
LINC00200-201ENST00000425630 CSRNP3Q8WYN3 585 aa25.67■■□□□ 1.7
LINC00200-201ENST00000425630 UBTFP17480 764 aaKnown RBP25.67■■□□□ 1.7
LINC00200-201ENST00000425630 CENPBP07199 599 aaPredicted RBP25.66■■□□□ 1.7
LINC00200-201ENST00000425630 EEA1Q15075 1411 aa25.55■■□□□ 1.68
LINC00200-201ENST00000425630 ZNF316A6NFI3 1004 aaPredicted RBP25.55■■□□□ 1.68
LINC00200-201ENST00000425630 GOLGA3Q08378 1498 aa25.49■■□□□ 1.67
LINC00200-201ENST00000425630 HNRNPUL2Q1KMD3 747 aaKnown RBP25.42■■□□□ 1.66
LINC00200-201ENST00000425630 UNC13AQ9UPW8 1703 aa25.41■■□□□ 1.66
LINC00200-201ENST00000425630 YTHDC1Q96MU7 727 aaKnown RBP25.4■■□□□ 1.66
LINC00200-201ENST00000425630 MIER1Q8N108 512 aa25.33■■□□□ 1.65
LINC00200-201ENST00000425630 PABPN1Q86U42 306 aaKnown RBP eCLIP25.33■■□□□ 1.64
LINC00200-201ENST00000425630 CEP164Q9UPV0 1460 aa25.28■■□□□ 1.64
LINC00200-201ENST00000425630 CLIP1P30622 1438 aa25.27■■□□□ 1.64
LINC00200-201ENST00000425630 SYNJ1O43426 1573 aa25.27■■□□□ 1.64
LINC00200-201ENST00000425630 KIF21BO75037 1637 aa25.21■■□□□ 1.63
LINC00200-201ENST00000425630 VPS8Q8N3P4 1428 aa25.19■■□□□ 1.62
LINC00200-201ENST00000425630 RANGAP1P46060 587 aaPredicted RBP25.18■■□□□ 1.62
LINC00200-201ENST00000425630 RAPGEF2Q9Y4G8 1499 aa25.14■■□□□ 1.62
LINC00200-201ENST00000425630 BICRAQ9NZM4 1560 aa25.14■■□□□ 1.62
LINC00200-201ENST00000425630 PEG3Q9GZU2 1588 aa25.11■■□□□ 1.61
LINC00200-201ENST00000425630 APLP2Q06481 763 aa25.11■■□□□ 1.61
LINC00200-201ENST00000425630 BAZ1BQ9UIG0 1483 aaKnown RBP25.05■■□□□ 1.6
LINC00200-201ENST00000425630 ATAD2BQ9ULI0 1458 aa24.99■■□□□ 1.59
LINC00200-201ENST00000425630 DHX57Q6P158 1386 aaKnown RBP24.9■■□□□ 1.58
LINC00200-201ENST00000425630 MYT1Q01538 1121 aa24.88■■□□□ 1.57
LINC00200-201ENST00000425630 KANK4Q5T7N3 995 aaPredicted RBP24.87■■□□□ 1.57
LINC00200-201ENST00000425630 TOP2BQ02880 1626 aa24.83■■□□□ 1.57
LINC00200-201ENST00000425630 ARAP1Q96P48 1450 aa24.81■■□□□ 1.56
LINC00200-201ENST00000425630 CLSPNQ9HAW4 1339 aa24.81■■□□□ 1.56
LINC00200-201ENST00000425630 PRXQ9BXM0 1461 aa24.77■■□□□ 1.56
LINC00200-201ENST00000425630 ERICH3Q5RHP9 1530 aa24.72■■□□□ 1.55
LINC00200-201ENST00000425630 BIVM-ERCC5R4GMW8 1640 aa24.69■■□□□ 1.54
LINC00200-201ENST00000425630 RRBP1Q9P2E9 1410 aaKnown RBP24.66■■□□□ 1.54
LINC00200-201ENST00000425630 SUPT16HQ9Y5B9 1047 aaKnown RBP24.66■■□□□ 1.54
LINC00200-201ENST00000425630 ITGAEP38570 1179 aa24.6■■□□□ 1.53
LINC00200-201ENST00000425630 CUX1P39880 1505 aa24.58■■□□□ 1.52
LINC00200-201ENST00000425630 CCNB3Q8WWL7 1395 aa24.57■■□□□ 1.52
LINC00200-201ENST00000425630 CUX2O14529 1486 aa24.55■■□□□ 1.52
LINC00200-201ENST00000425630 KIF27Q86VH2 1401 aa24.54■■□□□ 1.52
LINC00200-201ENST00000425630 ARHGAP35Q9NRY4 1499 aa24.53■■□□□ 1.52
LINC00200-201ENST00000425630 KCNH8Q96L42 1107 aa24.51■■□□□ 1.51
LINC00200-201ENST00000425630 RAB3GAP2Q9H2M9 1393 aa24.45■■□□□ 1.5
LINC00200-201ENST00000425630 MAPKBP1O60336 1514 aa24.4■■□□□ 1.5
LINC00200-201ENST00000425630 TSHZ2Q9NRE2 1034 aa24.38■■□□□ 1.49
LINC00200-201ENST00000425630 NCAPD3P42695 1498 aa24.37■■□□□ 1.49
LINC00200-201ENST00000425630 HMGXB3Q12766 1538 aa24.34■■□□□ 1.49
LINC00200-201ENST00000425630 CFTRP13569 1480 aa24.33■■□□□ 1.49
LINC00200-201ENST00000425630 IGF1RP08069 1367 aa24.31■■□□□ 1.48
LINC00200-201ENST00000425630 SIN3AQ96ST3 1273 aa24.31■■□□□ 1.48
LINC00200-201ENST00000425630 SETD5Q9C0A6 1442 aa24.28■■□□□ 1.48
LINC00200-201ENST00000425630 TIAM1Q13009 1591 aa24.28■■□□□ 1.48
LINC00200-201ENST00000425630 DDX10Q13206 875 aaKnown RBP24.27■■□□□ 1.48
LINC00200-201ENST00000425630 PHLDB1Q86UU1 1377 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms