RNA–Protein interactions for RNA: ENST00000438893.2

AP000356.1-201, humanhuman

TSL 3 BASIC

Gene AP000356.1, Length 364 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000356.1-201ENST00000438893 NISCHQ9Y2I1 1504 aa35.52■■■■□ 3.28
AP000356.1-201ENST00000438893 ABCC9O60706 1549 aa32.26■■■□□ 2.75
AP000356.1-201ENST00000438893 CCDC180Q9P1Z9 1646 aa31.84■■■□□ 2.69
AP000356.1-201ENST00000438893 DNAJC5BQ9UF47 199 aa30.55■■■□□ 2.48
AP000356.1-201ENST00000438893 RB1CC1Q8TDY2 1594 aa30.5■■■□□ 2.47
AP000356.1-201ENST00000438893 NACADO15069 1562 aa30.25■■■□□ 2.43
AP000356.1-201ENST00000438893 DCAF8L2P0C7V8 631 aa30.25■■■□□ 2.43
AP000356.1-201ENST00000438893 PABPN1Q86U42 306 aaKnown RBP eCLIP30.09■■■□□ 2.41
AP000356.1-201ENST00000438893 MYO15BQ96JP2 1530 aa29.75■■■□□ 2.35
AP000356.1-201ENST00000438893 UNC13AQ9UPW8 1703 aa29.7■■■□□ 2.34
AP000356.1-201ENST00000438893 BICRAQ9NZM4 1560 aa29.64■■■□□ 2.34
AP000356.1-201ENST00000438893 ZCCHC6Q5VYS8 1495 aaKnown RBP29.38■■■□□ 2.29
AP000356.1-201ENST00000438893 DCAF1Q9Y4B6 1507 aa29.29■■■□□ 2.28
AP000356.1-201ENST00000438893 SHROOM4Q9ULL8 1493 aa29.17■■■□□ 2.26
AP000356.1-201ENST00000438893 SCRIBQ14160 1630 aa29.11■■■□□ 2.25
AP000356.1-201ENST00000438893 CECR2Q9BXF3 1484 aa29.07■■■□□ 2.24
AP000356.1-201ENST00000438893 CC2D2AQ9P2K1 1620 aa29.05■■■□□ 2.24
AP000356.1-201ENST00000438893 EIF4G1Q04637 1599 aaKnown RBP28.94■■■□□ 2.22
AP000356.1-201ENST00000438893 DNAJC5Q9H3Z4 198 aa28.18■■■□□ 2.1
AP000356.1-201ENST00000438893 NCAPD3P42695 1498 aa27.99■■■□□ 2.07
AP000356.1-201ENST00000438893 ATAD2BQ9ULI0 1458 aa27.88■■■□□ 2.05
AP000356.1-201ENST00000438893 ERCC6Q03468 1493 aa27.85■■■□□ 2.05
AP000356.1-201ENST00000438893 CUX2O14529 1486 aa27.83■■■□□ 2.05
AP000356.1-201ENST00000438893 SMARCA2P51531 1590 aa27.73■■■□□ 2.03
AP000356.1-201ENST00000438893 SMARCA4P51532 1647 aa27.72■■■□□ 2.03
AP000356.1-201ENST00000438893 HMGXB3Q12766 1538 aa27.69■■■□□ 2.02
AP000356.1-201ENST00000438893 NESP48681 1621 aa27.64■■■□□ 2.02
AP000356.1-201ENST00000438893 BAZ1BQ9UIG0 1483 aaKnown RBP27.58■■■□□ 2.01
AP000356.1-201ENST00000438893 BAZ1AQ9NRL2 1556 aaPredicted RBP27.56■■■□□ 2
AP000356.1-201ENST00000438893 PEG3Q9GZU2 1588 aa27.43■■□□□ 1.98
AP000356.1-201ENST00000438893 MROH2BQ7Z745 1585 aa27.39■■□□□ 1.98
AP000356.1-201ENST00000438893 LAMC3Q9Y6N6 1575 aa27.32■■□□□ 1.96
AP000356.1-201ENST00000438893 THOC2Q8NI27 1593 aaKnown RBP27.31■■□□□ 1.96
AP000356.1-201ENST00000438893 PDS5BQ9NTI5 1447 aa27.24■■□□□ 1.95
AP000356.1-201ENST00000438893 CADPSQ9ULU8 1353 aa27.16■■□□□ 1.94
AP000356.1-201ENST00000438893 KIF21AQ7Z4S6 1674 aa27.14■■□□□ 1.94
AP000356.1-201ENST00000438893 MRC2Q9UBG0 1479 aa27.01■■□□□ 1.91
AP000356.1-201ENST00000438893 WIZO95785 1651 aa27.01■■□□□ 1.91
AP000356.1-201ENST00000438893 WDR62O43379 1518 aa26.91■■□□□ 1.9
AP000356.1-201ENST00000438893 TRIM41Q8WV44 630 aa26.89■■□□□ 1.9
AP000356.1-201ENST00000438893 CEP164Q9UPV0 1460 aa26.85■■□□□ 1.89
AP000356.1-201ENST00000438893 FANCD2Q9BXW9 1451 aa26.83■■□□□ 1.89
AP000356.1-201ENST00000438893 RSF1Q96T23 1441 aaPredicted RBP26.78■■□□□ 1.88
AP000356.1-201ENST00000438893 CFTRP13569 1480 aa26.76■■□□□ 1.87
AP000356.1-201ENST00000438893 TOP2AP11388 1531 aaKnown RBP26.65■■□□□ 1.86
AP000356.1-201ENST00000438893 OSCARQ8IYS5 282 aa26.63■■□□□ 1.85
AP000356.1-201ENST00000438893 URB2Q14146 1524 aaKnown RBP26.61■■□□□ 1.85
AP000356.1-201ENST00000438893 CCDC88BA6NC98 1476 aa26.42■■□□□ 1.82
AP000356.1-201ENST00000438893 ZNF608Q9ULD9 1512 aaPredicted RBP26.34■■□□□ 1.81
AP000356.1-201ENST00000438893 IFT140Q96RY7 1462 aa26.33■■□□□ 1.81
AP000356.1-201ENST00000438893 TOPBP1Q92547 1522 aa26.28■■□□□ 1.8
AP000356.1-201ENST00000438893 PRDM2Q13029 1718 aa26.25■■□□□ 1.79
AP000356.1-201ENST00000438893 RIMBP3CA6NJZ7 1639 aa26.18■■□□□ 1.78
AP000356.1-201ENST00000438893 RIMBP3BA6NNM3 1639 aa26.18■■□□□ 1.78
AP000356.1-201ENST00000438893 RIMBP3Q9UFD9 1639 aa26.18■■□□□ 1.78
AP000356.1-201ENST00000438893 ABCC8Q09428 1581 aa26.18■■□□□ 1.78
AP000356.1-201ENST00000438893 ARHGEF11O15085 1522 aa26.12■■□□□ 1.77
AP000356.1-201ENST00000438893 DNMBPQ6XZF7 1577 aa26.12■■□□□ 1.77
AP000356.1-201ENST00000438893 AQRO60306 1485 aaKnown RBP eCLIP26.11■■□□□ 1.77
AP000356.1-201ENST00000438893 EIF4G3O43432 1585 aaKnown RBP26.09■■□□□ 1.77
AP000356.1-201ENST00000438893 CYB5RLQ6IPT4 315 aa26.05■■□□□ 1.76
AP000356.1-201ENST00000438893 FBLN2P98095 1184 aa26.03■■□□□ 1.76
AP000356.1-201ENST00000438893 TARBP1Q13395 1621 aaKnown RBP26■■□□□ 1.75
AP000356.1-201ENST00000438893 POLA1P09884 1462 aaPredicted RBP25.99■■□□□ 1.75
AP000356.1-201ENST00000438893 RAD54L2Q9Y4B4 1467 aa25.96■■□□□ 1.75
AP000356.1-201ENST00000438893 TDRD9Q8NDG6 1382 aaKnown RBP25.93■■□□□ 1.74
AP000356.1-201ENST00000438893 SOGA1O94964 1423 aa25.92■■□□□ 1.74
AP000356.1-201ENST00000438893 CHD1O14646 1710 aa25.9■■□□□ 1.74
AP000356.1-201ENST00000438893 ARAP1Q96P48 1450 aa25.86■■□□□ 1.73
AP000356.1-201ENST00000438893 TRHP20396 242 aaPredicted RBP25.84■■□□□ 1.73
AP000356.1-201ENST00000438893 FGD5Q6ZNL6 1462 aa25.81■■□□□ 1.72
AP000356.1-201ENST00000438893 SNAPC4Q5SXM2 1469 aa25.79■■□□□ 1.72
AP000356.1-201ENST00000438893 CHMP7Q8WUX9 453 aaPredicted RBP25.78■■□□□ 1.72
AP000356.1-201ENST00000438893 CUX1P39880 1505 aa25.74■■□□□ 1.71
AP000356.1-201ENST00000438893 GRIN2BQ13224 1484 aa25.68■■□□□ 1.7
AP000356.1-201ENST00000438893 MAGI1Q96QZ7 1491 aaPredicted RBP25.67■■□□□ 1.7
AP000356.1-201ENST00000438893 WDR97A6NE52 1622 aa25.67■■□□□ 1.7
AP000356.1-201ENST00000438893 CLASP1Q7Z460 1538 aa25.67■■□□□ 1.7
AP000356.1-201ENST00000438893 SYNJ1O43426 1573 aa25.62■■□□□ 1.69
AP000356.1-201ENST00000438893 SYNJ2O15056 1496 aa25.61■■□□□ 1.69
AP000356.1-201ENST00000438893 GAPVD1Q14C86 1478 aa25.57■■□□□ 1.68
AP000356.1-201ENST00000438893 SUPT5HO00267 1087 aaKnown RBP25.51■■□□□ 1.67
AP000356.1-201ENST00000438893 ABCA10Q8WWZ4 1543 aa25.48■■□□□ 1.67
AP000356.1-201ENST00000438893 PBRM1Q86U86 1689 aa25.43■■□□□ 1.66
AP000356.1-201ENST00000438893 ABCA5Q8WWZ7 1642 aa25.41■■□□□ 1.66
AP000356.1-201ENST00000438893 WRNQ14191 1432 aaPredicted RBP eCLIP25.37■■□□□ 1.65
AP000356.1-201ENST00000438893 GRIN2AQ12879 1464 aa25.34■■□□□ 1.65
AP000356.1-201ENST00000438893 ERCC6L2Q5T890 1561 aa25.3■■□□□ 1.64
AP000356.1-201ENST00000438893 NUP160Q12769 1436 aa25.28■■□□□ 1.64
AP000356.1-201ENST00000438893 ADAMTS12P58397 1594 aa25.25■■□□□ 1.63
AP000356.1-201ENST00000438893 CEP170Q5SW79 1584 aa25.24■■□□□ 1.63
AP000356.1-201ENST00000438893 FHAD1B1AJZ9 1412 aa25.24■■□□□ 1.63
AP000356.1-201ENST00000438893 AEBP2Q6ZN18 517 aaPredicted RBP25.23■■□□□ 1.63
AP000356.1-201ENST00000438893 TOP2BQ02880 1626 aa25.21■■□□□ 1.63
AP000356.1-201ENST00000438893 BIVM-ERCC5R4GMW8 1640 aa25.18■■□□□ 1.62
AP000356.1-201ENST00000438893 ERICH3Q5RHP9 1530 aa25.13■■□□□ 1.61
AP000356.1-201ENST00000438893 SHROOM2Q13796 1616 aa25.11■■□□□ 1.61
AP000356.1-201ENST00000438893 JPH4Q96JJ6 628 aa25.1■■□□□ 1.61
AP000356.1-201ENST00000438893 PRG4Q92954 1404 aaPredicted RBP25.09■■□□□ 1.61
AP000356.1-201ENST00000438893 NPM1P06748 294 aaKnown RBP eCLIP24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms