RNA–Protein interactions for RNA: ENST00000568332.1

AP001063.1-201, humanhuman

BASIC

Gene AP001063.1, Length 529 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001063.1-201ENST00000568332 NISCHQ9Y2I1 1504 aa37.16■■■■□ 3.54
AP001063.1-201ENST00000568332 CCDC180Q9P1Z9 1646 aa33■■■□□ 2.87
AP001063.1-201ENST00000568332 ABCC9O60706 1549 aa32.28■■■□□ 2.76
AP001063.1-201ENST00000568332 RB1CC1Q8TDY2 1594 aa31.09■■■□□ 2.57
AP001063.1-201ENST00000568332 DCAF8L2P0C7V8 631 aa31.09■■■□□ 2.57
AP001063.1-201ENST00000568332 NACADO15069 1562 aa31.08■■■□□ 2.57
AP001063.1-201ENST00000568332 ZCCHC6Q5VYS8 1495 aaKnown RBP30.95■■■□□ 2.54
AP001063.1-201ENST00000568332 MYO15BQ96JP2 1530 aa30.93■■■□□ 2.54
AP001063.1-201ENST00000568332 DCAF1Q9Y4B6 1507 aa30.78■■■□□ 2.52
AP001063.1-201ENST00000568332 UNC13AQ9UPW8 1703 aa30.24■■■□□ 2.43
AP001063.1-201ENST00000568332 PABPN1Q86U42 306 aaKnown RBP eCLIP30.2■■■□□ 2.43
AP001063.1-201ENST00000568332 BICRAQ9NZM4 1560 aa30.09■■■□□ 2.41
AP001063.1-201ENST00000568332 SCRIBQ14160 1630 aa30.08■■■□□ 2.41
AP001063.1-201ENST00000568332 SHROOM4Q9ULL8 1493 aa29.89■■■□□ 2.38
AP001063.1-201ENST00000568332 DNAJC5BQ9UF47 199 aa29.61■■■□□ 2.33
AP001063.1-201ENST00000568332 EIF4G1Q04637 1599 aaKnown RBP29.32■■■□□ 2.28
AP001063.1-201ENST00000568332 CC2D2AQ9P2K1 1620 aa29.18■■■□□ 2.26
AP001063.1-201ENST00000568332 CECR2Q9BXF3 1484 aa29.04■■■□□ 2.24
AP001063.1-201ENST00000568332 BAZ1AQ9NRL2 1556 aaPredicted RBP28.82■■■□□ 2.2
AP001063.1-201ENST00000568332 SMARCA4P51532 1647 aa28.8■■■□□ 2.2
AP001063.1-201ENST00000568332 AEBP2Q6ZN18 517 aaPredicted RBP28.73■■■□□ 2.19
AP001063.1-201ENST00000568332 NCAPD3P42695 1498 aa28.7■■■□□ 2.18
AP001063.1-201ENST00000568332 ATAD2BQ9ULI0 1458 aa28.68■■■□□ 2.18
AP001063.1-201ENST00000568332 SMARCA2P51531 1590 aa28.67■■■□□ 2.18
AP001063.1-201ENST00000568332 MROH2BQ7Z745 1585 aa28.61■■■□□ 2.17
AP001063.1-201ENST00000568332 PEG3Q9GZU2 1588 aa28.55■■■□□ 2.16
AP001063.1-201ENST00000568332 HMGXB3Q12766 1538 aa28.52■■■□□ 2.16
AP001063.1-201ENST00000568332 BAZ1BQ9UIG0 1483 aaKnown RBP28.46■■■□□ 2.15
AP001063.1-201ENST00000568332 RSF1Q96T23 1441 aaPredicted RBP28.34■■■□□ 2.13
AP001063.1-201ENST00000568332 WIZO95785 1651 aa28.26■■■□□ 2.12
AP001063.1-201ENST00000568332 TOP2AP11388 1531 aaKnown RBP28.02■■■□□ 2.08
AP001063.1-201ENST00000568332 CHIC1Q5VXU3 224 aa27.93■■■□□ 2.06
AP001063.1-201ENST00000568332 NESP48681 1621 aa27.91■■■□□ 2.06
AP001063.1-201ENST00000568332 LAMC3Q9Y6N6 1575 aa27.9■■■□□ 2.06
AP001063.1-201ENST00000568332 ERCC6Q03468 1493 aa27.87■■■□□ 2.05
AP001063.1-201ENST00000568332 CADPSQ9ULU8 1353 aa27.86■■■□□ 2.05
AP001063.1-201ENST00000568332 PDS5BQ9NTI5 1447 aa27.77■■■□□ 2.04
AP001063.1-201ENST00000568332 CCDC88BA6NC98 1476 aa27.7■■■□□ 2.03
AP001063.1-201ENST00000568332 CFTRP13569 1480 aa27.68■■■□□ 2.02
AP001063.1-201ENST00000568332 SUPT5HO00267 1087 aaKnown RBP27.64■■■□□ 2.02
AP001063.1-201ENST00000568332 CUX2O14529 1486 aa27.58■■■□□ 2.01
AP001063.1-201ENST00000568332 KIF21AQ7Z4S6 1674 aa27.53■■■□□ 2
AP001063.1-201ENST00000568332 FANCD2Q9BXW9 1451 aa27.51■■■□□ 2
AP001063.1-201ENST00000568332 CEP164Q9UPV0 1460 aa27.48■■□□□ 1.99
AP001063.1-201ENST00000568332 THOC2Q8NI27 1593 aaKnown RBP27.48■■□□□ 1.99
AP001063.1-201ENST00000568332 MRC2Q9UBG0 1479 aa27.44■■□□□ 1.98
AP001063.1-201ENST00000568332 PRDM2Q13029 1718 aa27.36■■□□□ 1.97
AP001063.1-201ENST00000568332 WDR62O43379 1518 aa27.32■■□□□ 1.96
AP001063.1-201ENST00000568332 URB2Q14146 1524 aaKnown RBP27.21■■□□□ 1.95
AP001063.1-201ENST00000568332 ABCC8Q09428 1581 aa27.14■■□□□ 1.93
AP001063.1-201ENST00000568332 TOPBP1Q92547 1522 aa27.06■■□□□ 1.92
AP001063.1-201ENST00000568332 DNMBPQ6XZF7 1577 aa27.03■■□□□ 1.92
AP001063.1-201ENST00000568332 IFT140Q96RY7 1462 aa26.93■■□□□ 1.9
AP001063.1-201ENST00000568332 CUX1P39880 1505 aa26.84■■□□□ 1.89
AP001063.1-201ENST00000568332 POLA1P09884 1462 aaPredicted RBP26.83■■□□□ 1.89
AP001063.1-201ENST00000568332 SOGA1O94964 1423 aa26.77■■□□□ 1.88
AP001063.1-201ENST00000568332 FGD5Q6ZNL6 1462 aa26.76■■□□□ 1.87
AP001063.1-201ENST00000568332 ZNF608Q9ULD9 1512 aaPredicted RBP26.74■■□□□ 1.87
AP001063.1-201ENST00000568332 WRNQ14191 1432 aaPredicted RBP eCLIP26.73■■□□□ 1.87
AP001063.1-201ENST00000568332 TARBP1Q13395 1621 aaKnown RBP26.73■■□□□ 1.87
AP001063.1-201ENST00000568332 DNAJC5Q9H3Z4 198 aa26.73■■□□□ 1.87
AP001063.1-201ENST00000568332 RAD54L2Q9Y4B4 1467 aa26.7■■□□□ 1.87
AP001063.1-201ENST00000568332 TOP2BQ02880 1626 aa26.63■■□□□ 1.85
AP001063.1-201ENST00000568332 AQRO60306 1485 aaKnown RBP eCLIP26.62■■□□□ 1.85
AP001063.1-201ENST00000568332 EIF4G3O43432 1585 aaKnown RBP26.61■■□□□ 1.85
AP001063.1-201ENST00000568332 BIVM-ERCC5R4GMW8 1640 aa26.6■■□□□ 1.85
AP001063.1-201ENST00000568332 TDRD9Q8NDG6 1382 aaKnown RBP26.59■■□□□ 1.85
AP001063.1-201ENST00000568332 WDR97A6NE52 1622 aa26.59■■□□□ 1.85
AP001063.1-201ENST00000568332 SYNJ1O43426 1573 aa26.58■■□□□ 1.85
AP001063.1-201ENST00000568332 ABCA10Q8WWZ4 1543 aa26.54■■□□□ 1.84
AP001063.1-201ENST00000568332 OSCARQ8IYS5 282 aa26.49■■□□□ 1.83
AP001063.1-201ENST00000568332 GRIN2BQ13224 1484 aa26.45■■□□□ 1.82
AP001063.1-201ENST00000568332 GAPVD1Q14C86 1478 aa26.44■■□□□ 1.82
AP001063.1-201ENST00000568332 MAGI1Q96QZ7 1491 aaPredicted RBP26.38■■□□□ 1.81
AP001063.1-201ENST00000568332 ABCA5Q8WWZ7 1642 aa26.37■■□□□ 1.81
AP001063.1-201ENST00000568332 SNAPC4Q5SXM2 1469 aa26.36■■□□□ 1.81
AP001063.1-201ENST00000568332 FBLN2P98095 1184 aa26.34■■□□□ 1.81
AP001063.1-201ENST00000568332 CHMP7Q8WUX9 453 aaPredicted RBP26.3■■□□□ 1.8
AP001063.1-201ENST00000568332 PBRM1Q86U86 1689 aa26.28■■□□□ 1.8
AP001063.1-201ENST00000568332 SYNJ2O15056 1496 aa26.27■■□□□ 1.8
AP001063.1-201ENST00000568332 CHD1O14646 1710 aa26.23■■□□□ 1.79
AP001063.1-201ENST00000568332 ERICH3Q5RHP9 1530 aa26.22■■□□□ 1.79
AP001063.1-201ENST00000568332 KIF27Q86VH2 1401 aa26.2■■□□□ 1.78
AP001063.1-201ENST00000568332 FHAD1B1AJZ9 1412 aa26.16■■□□□ 1.78
AP001063.1-201ENST00000568332 TRIM41Q8WV44 630 aa26.16■■□□□ 1.78
AP001063.1-201ENST00000568332 ADAMTS12P58397 1594 aa26.12■■□□□ 1.77
AP001063.1-201ENST00000568332 GRIN2AQ12879 1464 aa26.08■■□□□ 1.77
AP001063.1-201ENST00000568332 IGF1RP08069 1367 aa26.07■■□□□ 1.76
AP001063.1-201ENST00000568332 CLASP1Q7Z460 1538 aa26.02■■□□□ 1.76
AP001063.1-201ENST00000568332 NUP160Q12769 1436 aa25.97■■□□□ 1.75
AP001063.1-201ENST00000568332 ARHGEF11O15085 1522 aa25.96■■□□□ 1.75
AP001063.1-201ENST00000568332 CUL7Q14999 1698 aa25.96■■□□□ 1.75
AP001063.1-201ENST00000568332 CARMIL1Q5VZK9 1371 aa25.94■■□□□ 1.74
AP001063.1-201ENST00000568332 RIMBP3CA6NJZ7 1639 aa25.93■■□□□ 1.74
AP001063.1-201ENST00000568332 RIMBP3BA6NNM3 1639 aa25.93■■□□□ 1.74
AP001063.1-201ENST00000568332 RIMBP3Q9UFD9 1639 aa25.93■■□□□ 1.74
AP001063.1-201ENST00000568332 CEP170Q5SW79 1584 aa25.9■■□□□ 1.74
AP001063.1-201ENST00000568332 RUSC2Q8N2Y8 1516 aa25.87■■□□□ 1.73
AP001063.1-201ENST00000568332 CYB5RLQ6IPT4 315 aa25.78■■□□□ 1.72
AP001063.1-201ENST00000568332 RAPGEF2Q9Y4G8 1499 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms