RNA–Protein interactions for RNA: ENST00000374223.5

UBXN11-207, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best) BASIC

Gene UBXN11, Length 1,312 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-207ENST00000374223 NISCHQ9Y2I1 1504 aa35.7■■■■□ 3.31
UBXN11-207ENST00000374223 CCDC180Q9P1Z9 1646 aa31.91■■■□□ 2.7
UBXN11-207ENST00000374223 ABCC9O60706 1549 aa31.86■■■□□ 2.69
UBXN11-207ENST00000374223 RB1CC1Q8TDY2 1594 aa30.29■■■□□ 2.44
UBXN11-207ENST00000374223 DCAF8L2P0C7V8 631 aa30.1■■■□□ 2.41
UBXN11-207ENST00000374223 NACADO15069 1562 aa30.08■■■□□ 2.41
UBXN11-207ENST00000374223 DNAJC5BQ9UF47 199 aa30■■■□□ 2.39
UBXN11-207ENST00000374223 UNC13AQ9UPW8 1703 aa29.84■■■□□ 2.37
UBXN11-207ENST00000374223 PABPN1Q86U42 306 aaKnown RBP eCLIP29.72■■■□□ 2.359e-7■■■□□ 16.4
UBXN11-207ENST00000374223 MYO15BQ96JP2 1530 aa29.65■■■□□ 2.34
UBXN11-207ENST00000374223 ZCCHC6Q5VYS8 1495 aaKnown RBP29.63■■■□□ 2.33
UBXN11-207ENST00000374223 BICRAQ9NZM4 1560 aa29.55■■■□□ 2.32
UBXN11-207ENST00000374223 DCAF1Q9Y4B6 1507 aa29.39■■■□□ 2.3
UBXN11-207ENST00000374223 SCRIBQ14160 1630 aa29.23■■■□□ 2.27
UBXN11-207ENST00000374223 SHROOM4Q9ULL8 1493 aa29.06■■■□□ 2.24
UBXN11-207ENST00000374223 CC2D2AQ9P2K1 1620 aa28.79■■■□□ 2.2
UBXN11-207ENST00000374223 CECR2Q9BXF3 1484 aa28.74■■■□□ 2.19
UBXN11-207ENST00000374223 EIF4G1Q04637 1599 aaKnown RBP28.71■■■□□ 2.19
UBXN11-207ENST00000374223 SMARCA4P51532 1647 aa27.84■■■□□ 2.05
UBXN11-207ENST00000374223 ATAD2BQ9ULI0 1458 aa27.8■■■□□ 2.04
UBXN11-207ENST00000374223 NCAPD3P42695 1498 aa27.79■■■□□ 2.04
UBXN11-207ENST00000374223 DNAJC5Q9H3Z4 198 aa27.76■■■□□ 2.03
UBXN11-207ENST00000374223 BAZ1AQ9NRL2 1556 aaPredicted RBP27.64■■■□□ 2.01
UBXN11-207ENST00000374223 SMARCA2P51531 1590 aa27.63■■■□□ 2.01
UBXN11-207ENST00000374223 MROH2BQ7Z745 1585 aa27.61■■■□□ 2.01
UBXN11-207ENST00000374223 CUX2O14529 1486 aa27.61■■■□□ 2.01
UBXN11-207ENST00000374223 HMGXB3Q12766 1538 aa27.59■■■□□ 2.01
UBXN11-207ENST00000374223 ERCC6Q03468 1493 aa27.54■■■□□ 2
UBXN11-207ENST00000374223 PEG3Q9GZU2 1588 aa27.5■■□□□ 1.99
UBXN11-207ENST00000374223 BAZ1BQ9UIG0 1483 aaKnown RBP27.49■■□□□ 1.99
UBXN11-207ENST00000374223 NESP48681 1621 aa27.48■■□□□ 1.99
UBXN11-207ENST00000374223 WIZO95785 1651 aa27.34■■□□□ 1.97
UBXN11-207ENST00000374223 LAMC3Q9Y6N6 1575 aa27.15■■□□□ 1.94
UBXN11-207ENST00000374223 KIF21AQ7Z4S6 1674 aa27.14■■□□□ 1.93
UBXN11-207ENST00000374223 THOC2Q8NI27 1593 aaKnown RBP27.11■■□□□ 1.93
UBXN11-207ENST00000374223 RSF1Q96T23 1441 aaPredicted RBP27.04■■□□□ 1.92
UBXN11-207ENST00000374223 PDS5BQ9NTI5 1447 aa26.99■■□□□ 1.91
UBXN11-207ENST00000374223 CADPSQ9ULU8 1353 aa26.96■■□□□ 1.91
UBXN11-207ENST00000374223 TOP2AP11388 1531 aaKnown RBP26.85■■□□□ 1.89
UBXN11-207ENST00000374223 MRC2Q9UBG0 1479 aa26.75■■□□□ 1.87
UBXN11-207ENST00000374223 WDR62O43379 1518 aa26.7■■□□□ 1.87
UBXN11-207ENST00000374223 CFTRP13569 1480 aa26.7■■□□□ 1.86
UBXN11-207ENST00000374223 FANCD2Q9BXW9 1451 aa26.69■■□□□ 1.86
UBXN11-207ENST00000374223 CEP164Q9UPV0 1460 aa26.66■■□□□ 1.86
UBXN11-207ENST00000374223 CCDC88BA6NC98 1476 aa26.62■■□□□ 1.85
UBXN11-207ENST00000374223 PRDM2Q13029 1718 aa26.54■■□□□ 1.84
UBXN11-207ENST00000374223 URB2Q14146 1524 aaKnown RBP26.54■■□□□ 1.84
UBXN11-207ENST00000374223 TRIM41Q8WV44 630 aa26.4■■□□□ 1.82
UBXN11-207ENST00000374223 OSCARQ8IYS5 282 aa26.26■■□□□ 1.79
UBXN11-207ENST00000374223 TOPBP1Q92547 1522 aa26.24■■□□□ 1.79
UBXN11-207ENST00000374223 ZNF608Q9ULD9 1512 aaPredicted RBP26.21■■□□□ 1.79
UBXN11-207ENST00000374223 DNMBPQ6XZF7 1577 aa26.13■■□□□ 1.77
UBXN11-207ENST00000374223 IFT140Q96RY7 1462 aa26.09■■□□□ 1.77
UBXN11-207ENST00000374223 SUPT5HO00267 1087 aaKnown RBP26.05■■□□□ 1.76
UBXN11-207ENST00000374223 TARBP1Q13395 1621 aaKnown RBP26.04■■□□□ 1.76
UBXN11-207ENST00000374223 EIF4G3O43432 1585 aaKnown RBP26.03■■□□□ 1.76
UBXN11-207ENST00000374223 ABCC8Q09428 1581 aa26.01■■□□□ 1.75
UBXN11-207ENST00000374223 POLA1P09884 1462 aaPredicted RBP25.98■■□□□ 1.75
UBXN11-207ENST00000374223 AQRO60306 1485 aaKnown RBP eCLIP25.97■■□□□ 1.754e-14■■■■■ 52.8
UBXN11-207ENST00000374223 RAD54L2Q9Y4B4 1467 aa25.97■■□□□ 1.75
UBXN11-207ENST00000374223 RIMBP3CA6NJZ7 1639 aa25.94■■□□□ 1.74
UBXN11-207ENST00000374223 RIMBP3BA6NNM3 1639 aa25.94■■□□□ 1.74
UBXN11-207ENST00000374223 RIMBP3Q9UFD9 1639 aa25.94■■□□□ 1.74
UBXN11-207ENST00000374223 CUX1P39880 1505 aa25.91■■□□□ 1.74
UBXN11-207ENST00000374223 CHD1O14646 1710 aa25.87■■□□□ 1.73
UBXN11-207ENST00000374223 FGD5Q6ZNL6 1462 aa25.86■■□□□ 1.73
UBXN11-207ENST00000374223 ARHGEF11O15085 1522 aa25.85■■□□□ 1.73
UBXN11-207ENST00000374223 SOGA1O94964 1423 aa25.83■■□□□ 1.73
UBXN11-207ENST00000374223 TDRD9Q8NDG6 1382 aaKnown RBP25.82■■□□□ 1.72
UBXN11-207ENST00000374223 WDR97A6NE52 1622 aa25.72■■□□□ 1.71
UBXN11-207ENST00000374223 FBLN2P98095 1184 aa25.7■■□□□ 1.71
UBXN11-207ENST00000374223 SNAPC4Q5SXM2 1469 aa25.66■■□□□ 1.7
UBXN11-207ENST00000374223 CYB5RLQ6IPT4 315 aa25.63■■□□□ 1.69
UBXN11-207ENST00000374223 PBRM1Q86U86 1689 aa25.6■■□□□ 1.69
UBXN11-207ENST00000374223 ARAP1Q96P48 1450 aa25.57■■□□□ 1.68
UBXN11-207ENST00000374223 SYNJ1O43426 1573 aa25.55■■□□□ 1.68
UBXN11-207ENST00000374223 GRIN2BQ13224 1484 aa25.54■■□□□ 1.68
UBXN11-207ENST00000374223 ABCA5Q8WWZ7 1642 aa25.53■■□□□ 1.68
UBXN11-207ENST00000374223 ABCA10Q8WWZ4 1543 aa25.52■■□□□ 1.68
UBXN11-207ENST00000374223 BIVM-ERCC5R4GMW8 1640 aa25.51■■□□□ 1.67
UBXN11-207ENST00000374223 GAPVD1Q14C86 1478 aa25.51■■□□□ 1.67
UBXN11-207ENST00000374223 MAGI1Q96QZ7 1491 aaPredicted RBP25.49■■□□□ 1.67
UBXN11-207ENST00000374223 CLASP1Q7Z460 1538 aa25.49■■□□□ 1.67
UBXN11-207ENST00000374223 TOP2BQ02880 1626 aa25.48■■□□□ 1.67
UBXN11-207ENST00000374223 CHMP7Q8WUX9 453 aaPredicted RBP25.46■■□□□ 1.67
UBXN11-207ENST00000374223 WRNQ14191 1432 aaPredicted RBP eCLIP25.44■■□□□ 1.66
UBXN11-207ENST00000374223 SYNJ2O15056 1496 aa25.44■■□□□ 1.66
UBXN11-207ENST00000374223 TRHP20396 242 aaPredicted RBP25.41■■□□□ 1.66
UBXN11-207ENST00000374223 ADAMTS12P58397 1594 aa25.31■■□□□ 1.64
UBXN11-207ENST00000374223 CEP170Q5SW79 1584 aa25.25■■□□□ 1.63
UBXN11-207ENST00000374223 ERCC6L2Q5T890 1561 aa25.25■■□□□ 1.63
UBXN11-207ENST00000374223 GRIN2AQ12879 1464 aa25.25■■□□□ 1.63
UBXN11-207ENST00000374223 ERICH3Q5RHP9 1530 aa25.17■■□□□ 1.62
UBXN11-207ENST00000374223 FHAD1B1AJZ9 1412 aa25.16■■□□□ 1.62
UBXN11-207ENST00000374223 NUP160Q12769 1436 aa25.16■■□□□ 1.62
UBXN11-207ENST00000374223 SHROOM2Q13796 1616 aa25.07■■□□□ 1.6
UBXN11-207ENST00000374223 IGF1RP08069 1367 aa24.97■■□□□ 1.59
UBXN11-207ENST00000374223 RUSC2Q8N2Y8 1516 aa24.96■■□□□ 1.59
UBXN11-207ENST00000374223 PRG4Q92954 1404 aaPredicted RBP24.92■■□□□ 1.58
UBXN11-207ENST00000374223 KIF27Q86VH2 1401 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms