RNA–Protein interactions for RNA: ENST00000557527.1

LINC01148-201, Transcript of long intergenic non-protein coding RNA 1148, humanhuman

TSL 1 (best) BASIC

Gene LINC01148, Length 1,763 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01148-201ENST00000557527 NISCHQ9Y2I1 1504 aa38.46■■■■□ 3.75
LINC01148-201ENST00000557527 CCDC180Q9P1Z9 1646 aa33.52■■■□□ 2.96
LINC01148-201ENST00000557527 ZCCHC6Q5VYS8 1495 aaKnown RBP32.42■■■□□ 2.78
LINC01148-201ENST00000557527 DCAF8L2P0C7V8 631 aa31.79■■■□□ 2.68
LINC01148-201ENST00000557527 DCAF1Q9Y4B6 1507 aa31.78■■■□□ 2.68
LINC01148-201ENST00000557527 ABCC9O60706 1549 aa31.67■■■□□ 2.66
LINC01148-201ENST00000557527 SHROOM4Q9ULL8 1493 aa31.64■■■□□ 2.65
LINC01148-201ENST00000557527 MYO15BQ96JP2 1530 aa31.34■■■□□ 2.61
LINC01148-201ENST00000557527 NACADO15069 1562 aa31.18■■■□□ 2.58
LINC01148-201ENST00000557527 RB1CC1Q8TDY2 1594 aa30.94■■■□□ 2.54
LINC01148-201ENST00000557527 SCRIBQ14160 1630 aa30.89■■■□□ 2.53
LINC01148-201ENST00000557527 SUPT5HO00267 1087 aaKnown RBP30.51■■■□□ 2.47
LINC01148-201ENST00000557527 UNC13AQ9UPW8 1703 aa30.33■■■□□ 2.45
LINC01148-201ENST00000557527 RSF1Q96T23 1441 aaPredicted RBP29.92■■■□□ 2.38
LINC01148-201ENST00000557527 PABPN1Q86U42 306 aaKnown RBP eCLIP29.88■■■□□ 2.37
LINC01148-201ENST00000557527 BICRAQ9NZM4 1560 aa29.88■■■□□ 2.37
LINC01148-201ENST00000557527 CECR2Q9BXF3 1484 aa29.87■■■□□ 2.37
LINC01148-201ENST00000557527 MROH2BQ7Z745 1585 aa29.77■■■□□ 2.36
LINC01148-201ENST00000557527 BAZ1AQ9NRL2 1556 aaPredicted RBP29.7■■■□□ 2.34
LINC01148-201ENST00000557527 WIZO95785 1651 aa29.63■■■□□ 2.33
LINC01148-201ENST00000557527 SMARCA4P51532 1647 aa29.59■■■□□ 2.33
LINC01148-201ENST00000557527 CHIC1Q5VXU3 224 aa29.35■■■□□ 2.29
LINC01148-201ENST00000557527 TOP2AP11388 1531 aaKnown RBP29.27■■■□□ 2.28
LINC01148-201ENST00000557527 PEG3Q9GZU2 1588 aa29.16■■■□□ 2.26
LINC01148-201ENST00000557527 EIF4G1Q04637 1599 aaKnown RBP29.05■■■□□ 2.24
LINC01148-201ENST00000557527 SMARCA2P51531 1590 aa29.03■■■□□ 2.24
LINC01148-201ENST00000557527 ATAD2BQ9ULI0 1458 aa28.97■■■□□ 2.23
LINC01148-201ENST00000557527 CCDC88BA6NC98 1476 aa28.9■■■□□ 2.22
LINC01148-201ENST00000557527 BAZ1BQ9UIG0 1483 aaKnown RBP28.85■■■□□ 2.21
LINC01148-201ENST00000557527 NCAPD3P42695 1498 aa28.77■■■□□ 2.2
LINC01148-201ENST00000557527 HMGXB3Q12766 1538 aa28.69■■■□□ 2.18
LINC01148-201ENST00000557527 CC2D2AQ9P2K1 1620 aa28.64■■■□□ 2.18
LINC01148-201ENST00000557527 TRIM41Q8WV44 630 aa28.61■■■□□ 2.17
LINC01148-201ENST00000557527 ABCC8Q09428 1581 aa28.52■■■□□ 2.16
LINC01148-201ENST00000557527 LOC105371045A0A1W2PR82 267 aa28.25■■■□□ 2.11
LINC01148-201ENST00000557527 PRDM2Q13029 1718 aa28.22■■■□□ 2.11
LINC01148-201ENST00000557527 SYNJ1O43426 1573 aa28.17■■■□□ 2.1
LINC01148-201ENST00000557527 WRNQ14191 1432 aaPredicted RBP eCLIP28.17■■■□□ 2.1
LINC01148-201ENST00000557527 FAM9AQ8IZU1 332 aaPredicted RBP28.16■■■□□ 2.1
LINC01148-201ENST00000557527 CFTRP13569 1480 aa28.09■■■□□ 2.09
LINC01148-201ENST00000557527 CADPSQ9ULU8 1353 aa28.05■■■□□ 2.08
LINC01148-201ENST00000557527 BIVM-ERCC5R4GMW8 1640 aa28.02■■■□□ 2.08
LINC01148-201ENST00000557527 TOP2BQ02880 1626 aa27.99■■■□□ 2.07
LINC01148-201ENST00000557527 DNAJC5BQ9UF47 199 aa27.96■■■□□ 2.07
LINC01148-201ENST00000557527 SOGA1O94964 1423 aa27.94■■■□□ 2.06
LINC01148-201ENST00000557527 EEA1Q15075 1411 aa27.91■■■□□ 2.06
LINC01148-201ENST00000557527 RUSC2Q8N2Y8 1516 aa27.85■■■□□ 2.05
LINC01148-201ENST00000557527 CUX1P39880 1505 aa27.82■■■□□ 2.04
LINC01148-201ENST00000557527 LAMC3Q9Y6N6 1575 aa27.81■■■□□ 2.04
LINC01148-201ENST00000557527 EHMT2Q96KQ7 1210 aa27.81■■■□□ 2.04
LINC01148-201ENST00000557527 NESP48681 1621 aa27.73■■■□□ 2.03
LINC01148-201ENST00000557527 FANCD2Q9BXW9 1451 aa27.72■■■□□ 2.03
LINC01148-201ENST00000557527 KIF21BO75037 1637 aa27.68■■■□□ 2.02
LINC01148-201ENST00000557527 PDS5BQ9NTI5 1447 aa27.66■■■□□ 2.02
LINC01148-201ENST00000557527 CSRNP3Q8WYN3 585 aa27.65■■■□□ 2.02
LINC01148-201ENST00000557527 GOLGA3Q08378 1498 aa27.61■■■□□ 2.01
LINC01148-201ENST00000557527 CEP164Q9UPV0 1460 aa27.56■■■□□ 2
LINC01148-201ENST00000557527 TNIKQ9UKE5 1360 aa27.5■■□□□ 1.99
LINC01148-201ENST00000557527 DNMBPQ6XZF7 1577 aa27.48■■□□□ 1.99
LINC01148-201ENST00000557527 CEP162Q5TB80 1403 aa27.46■■□□□ 1.99
LINC01148-201ENST00000557527 FGD5Q6ZNL6 1462 aa27.45■■□□□ 1.98
LINC01148-201ENST00000557527 KIF21AQ7Z4S6 1674 aa27.43■■□□□ 1.98
LINC01148-201ENST00000557527 KIF27Q86VH2 1401 aa27.4■■□□□ 1.98
LINC01148-201ENST00000557527 RAPGEF2Q9Y4G8 1499 aa27.38■■□□□ 1.97
LINC01148-201ENST00000557527 ERICH3Q5RHP9 1530 aa27.38■■□□□ 1.97
LINC01148-201ENST00000557527 TOPBP1Q92547 1522 aa27.38■■□□□ 1.97
LINC01148-201ENST00000557527 UBTFP17480 764 aaKnown RBP27.35■■□□□ 1.97
LINC01148-201ENST00000557527 PRXQ9BXM0 1461 aa27.32■■□□□ 1.96
LINC01148-201ENST00000557527 URB2Q14146 1524 aaKnown RBP27.31■■□□□ 1.96
LINC01148-201ENST00000557527 PCGF6Q9BYE7 350 aa27.31■■□□□ 1.96
LINC01148-201ENST00000557527 CUX2O14529 1486 aa27.31■■□□□ 1.96
LINC01148-201ENST00000557527 POLA1P09884 1462 aaPredicted RBP27.26■■□□□ 1.95
LINC01148-201ENST00000557527 WDR97A6NE52 1622 aa27.26■■□□□ 1.95
LINC01148-201ENST00000557527 ERCC6Q03468 1493 aa27.24■■□□□ 1.95
LINC01148-201ENST00000557527 MRC2Q9UBG0 1479 aa27.24■■□□□ 1.95
LINC01148-201ENST00000557527 TRIM26Q12899 539 aaPredicted RBP27.2■■□□□ 1.94
LINC01148-201ENST00000557527 ABCA10Q8WWZ4 1543 aa27.18■■□□□ 1.94
LINC01148-201ENST00000557527 RAD54L2Q9Y4B4 1467 aa27.16■■□□□ 1.94
LINC01148-201ENST00000557527 CLIP1P30622 1438 aa27.15■■□□□ 1.94
LINC01148-201ENST00000557527 IGF1RP08069 1367 aa27.07■■□□□ 1.92
LINC01148-201ENST00000557527 WDR62O43379 1518 aa27.06■■□□□ 1.92
LINC01148-201ENST00000557527 CUL7Q14999 1698 aa27.05■■□□□ 1.92
LINC01148-201ENST00000557527 ABCA5Q8WWZ7 1642 aa27.05■■□□□ 1.92
LINC01148-201ENST00000557527 TARBP1Q13395 1621 aaKnown RBP26.99■■□□□ 1.91
LINC01148-201ENST00000557527 CARMIL1Q5VZK9 1371 aa26.97■■□□□ 1.91
LINC01148-201ENST00000557527 VPS8Q8N3P4 1428 aa26.97■■□□□ 1.91
LINC01148-201ENST00000557527 PPARGC1BQ86YN6 1023 aaKnown RBP26.95■■□□□ 1.9
LINC01148-201ENST00000557527 THOC2Q8NI27 1593 aaKnown RBP26.95■■□□□ 1.9
LINC01148-201ENST00000557527 TDRD9Q8NDG6 1382 aaKnown RBP26.93■■□□□ 1.9
LINC01148-201ENST00000557527 IFT140Q96RY7 1462 aa26.92■■□□□ 1.9
LINC01148-201ENST00000557527 ARAP1Q96P48 1450 aa26.91■■□□□ 1.9
LINC01148-201ENST00000557527 GAPVD1Q14C86 1478 aa26.9■■□□□ 1.9
LINC01148-201ENST00000557527 PBRM1Q86U86 1689 aa26.9■■□□□ 1.9
LINC01148-201ENST00000557527 CTTNBP2Q8WZ74 1663 aa26.9■■□□□ 1.9
LINC01148-201ENST00000557527 RANGAP1P46060 587 aaPredicted RBP26.88■■□□□ 1.89
LINC01148-201ENST00000557527 HRCP23327 699 aa26.81■■□□□ 1.88
LINC01148-201ENST00000557527 ARHGAP35Q9NRY4 1499 aa26.8■■□□□ 1.88
LINC01148-201ENST00000557527 AQRO60306 1485 aaKnown RBP eCLIP26.76■■□□□ 1.87
LINC01148-201ENST00000557527 TTBK1Q5TCY1 1321 aaPredicted RBP26.72■■□□□ 1.87
LINC01148-201ENST00000557527 GRIN2BQ13224 1484 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms